Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2652 cluster # 2652       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2652#0 length = 1908 sequences # 1  
consensus_2652#1 length = 1684 sequences # 1  

consensusID : consensus_2652#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1908
fasta sequence
                              [TGGCTTGCCGGTGAGGCGGTAAGTATTCCAAATAAACTCATCTAGGTTTTTGTACCCATACGTAAATAAACACGTGATCTCCAAAACTCCGATCGATCGGCTCGCGGCGCCGCTCATGGAAACCCTACGGCCGGTTGCGACGGCGACGGCGACGCTGCCTTCCGGCGTTCCGCCGCCGGCGGCGGCGGCGGCGGCCAGAGGCTACCCAGGGTGGGTGATGCTCATGCCCTACGCCACGGCCGAACGCGAGGTCGACGACTCGGAGTACTCCACCTCCAACTCCGGTGGAGCCAAGATCACCGGGGCGGCCTCCCGCTCCTCGTCCGGCCATCTCGTCCGCGTCTCCCTCCGCCTCGAGTCGCCACCGGCGGCGTCGGGGCTAAGCTTCCACTGCTCACCGTGCGGCGGCTCCGGATACGGAGCTCATCATTACCGGCCCTCGATGTACGTCGTCGCTGCCCACGGCGACTCCGTGCTCCTCGAGATGCATTACCAGAAGGAAGGGTACCAACAATACGGGATCGATTACTTCTTCTACAATGCCGGCGACGGCGACGAGGACCCACCACGGCGGCCGCCGTCGTTGTCGCTCTCCCGACTTATCAGGGTACCAATACCAAGCCGCCCCGGCTGCGTGGAGGTAGCACCGGCCTCCTCGTGCGCCGCTGCGGCGACGACGACGACGACGAGCTCGTGGTGGCGGCGCTCCTCACCGAGGAGTACCGCAGGCGCGACACGCTGGAGGGCGCCGAGCTCGTCGTGCTCCGCTCCGGCGAGTGGAGCGCCACGCCGATCGCGCCGATCGTCCACGACGACGGCAAGGGCGAGGAGCTCTCCTACTGGGAGACCGACATGGCCGTCCCCGTCGGCGACCGGCTGCTGTGCTACGTCGACCTGTACCGCGGCGTCATCCTCTGCGGCGACGACCTGTTCGACGAAATTCCCCCGCGGCTGCAGTACGTGTCGCTCCCCGTGGAGGCCCCCGCCGGCGCGTTCGACGAGGAGCACTTCGACCGCCAGGGCGACAACTATCGGCGTTGTCTGCTCAACACTCGAACCGTCGTCTGCGCCATCGACGGCGGCGGCGCCGCGCTCAAATTCGTCGACATCTCCTCCCGCTGCTGCTGCGGCAGCCTGGGCAAGCACACCACCTGCGACCGTTCGAGCCGCGCCTTCGTCATCAGAACCTGGACACTGAGGATCGACGGCGACGGCGACGACGACATGGCGTGGACCATGGACGCCATGATCGACGCCGCCGAGCTTGGTCCCTCGACGCCTACTCCGCCCTCCCACGGAGCTTTCCACTACACCCCATAGTGAGCATGGATGATCCAAATCTCGTCTGCCTCATTGTGGACGAAGAACGCAAACGGGGTGCACATTACGTCGCCGAAGAGGTGGTATGGAAGATCATGATGGATACAAGGAGCAAGGCACTAGTGTCGGTTTGGCGCGGCGACGGTCGGTGCCATTGGCGACAGCCACATGGATACACTTGTATTCCTGTCAAAATCCCTGACTGCTTTGCTACCTATGTGAGTTATAGCAAAGCCACGACAATGTTGCCAGCGATGGTCGACAAGATACCAATTGCAACACCAACTGCAACCGGAACTGGCACTAATTTGTCGCAATCTTTGCCATCCGAGTCATCTCCCCAAAGTCTGTATGTGTTAATGGCTTCTCCTGGGGAGATCTTGGTAGCACTTGAAGAGATACCTGGGTTGGATTGTGATGATTTGCTAACAGCTTATAGCATTCTTTGTCGTGACAATGGCCGTCTATTCAAAGCCCTTATGGGGCTCCCAATGAGTATGAGGAAGAAATTGTTGCTGATAGAAATTAAGGCTTATCTAAACTGTCATGTCTGCTCTACATGTACAACATGATCATGATATATTGGAA]

[+] EMBL AK072817             [TGGCTTGCCGGTGAGGCGGTAAGTATTCCAAATAAACTCATCTAGGTTTTTGTACCCATACGTAAATAAACACGTGATCTCCAAAACTCCGATCGATCGGCTCGCGGCGCCGCTCATGGAAACCCTACGGCCGGTTGCGACGGCGACGGCGACGCTGCCTTCCGGCGTTCCGCCGCCGGCGGCGGCGGCGGCGGCCAGAGGCTACCCAGGGTGGGTGATGCTCATGCCCTACGCCACGGCCGAACGCGAGGTCGACGACTCGGAGTACTCCACCTCCAACTCCGGTGGAGCCAAGATCACCGGGGCGGCCTCCCGCTCCTCGTCCGGCCATCTCGTCCGCGTCTCCCTCCGCCTCGAGTCGCCACCGGCGGCGTCGGGGCTAAGCTTCCACTGCTCACCGTGCGGCGGCTCCGGATACGGAGCTCATCATTACCGGCCCTCGATGTACGTCGTCGCTGCCCACGGCGACTCCGTGCTCCTCGAGATGCATTACCAGAAGGAAGGGTACCAACAATACGGGATCGATTACTTCTTCTACAATGCCGGCGACGGCGACGAGGACCCACCACGGCGGCCGCCGTCGTTGTCGCTCTCCCGACTTATCAGGGTACCAATACCAAGCCGCCCCGGCTGCGTGGAGGTAGCACCGGCCTCCTCGTGCGCCGCTGCGGCGACGACGACGACGACGAGCTCGTGGTGGCGGCGCTCCTCACCGAGGAGTACCGCAGGCGCGACACGCTGGAGGGCGCCGAGCTCGTCGTGCTCCGCTCCGGCGAGTGGAGCGCCACGCCGATCGCGCCGATCGTCCACGACGACGGCAAGGGCGAGGAGCTCTCCTACTGGGAGACCGACATGGCCGTCCCCGTCGGCGACCGGCTGCTGTGCTACGTCGACCTGTACCGCGGCGTCATCCTCTGCGGCGACGACCTGTTCGACGAAATTCCCCCGCGGCTGCAGTACGTGTCGCTCCCCGTGGAGGCCCCCGCCGGCGCGTTCGACGAGGAGCACTTCGACCGCCAGGGCGACAACTATCGGCGTTGTCTGCTCAACACTCGAACCGTCGTCTGCGCCATCGACGGCGGCGGCGCCGCGCTCAAATTCGTCGACATCTCCTCCCGCTGCTGCTGCGGCAGCCTGGGCAAGCACACCACCTGCGACCGTTCGAGCCGCGCCTTCGTCATCAGAACCTGGACACTGAGGATCGACGGCGACGGCGACGACGACATGGCGTGGACCATGGACGCCATGATCGACGCCGCCGAGCTTGGTCCCTCGACGCCTACTCCGCCCTCCCACGGAGCTTTCCACTACACCCCATAGTGAGCATGGATGATCCAAATCTCGTCTGCCTCATTGTGGACGAAGAACGCAAACGGGGTGCACATTACGTCGCCGAAGAGGTGGTATGGAAGATCATGATGGATACAAGGAGCAAGGCACTAGTGTCGGTTTGGCGCGGCGACGGTCGGTGCCATTGGCGACAGCCACATGGATACACTTGTATTCCTGTCAAAATCCCTGACTGCTTTGCTACCTATGTGAGTTATAGCAAAGCCACGACAATGTTGCCAGCGATGGTCGACAAGATACCAATTGCAACACCAACTGCAACCGGAACTGGCACTAATTTGTCGCAATCTTTGCCATCCGAGTCATCTCCCCAAAGTCTGTATGTGTTAATGGCTTCTCCTGGGGAGATCTTGGTAGCACTTGAAGAGATACCTGGGTTGGATTGTGATGATTTGCTAACAGCTTATAGCATTCTTTGTCGTGACAATGGCCGTCTATTCAAAGCCCTTATGGGGCTCCCAATGAGTATGAGGAAGAAATTGTTGCTGATAGAAATTAAGGCTTATCTAAACTGTCATGTCTGCTCTACATGTACAACATGATCATGATATATTGGAA]


>consensus_2652#0 TGGCTTGCCGGTGAGGCGGTAAGTATTCCAAATAAACTCATCTAGGTTTTTGTACCCATA CGTAAATAAACACGTGATCTCCAAAACTCCGATCGATCGGCTCGCGGCGCCGCTCATGGA AACCCTACGGCCGGTTGCGACGGCGACGGCGACGCTGCCTTCCGGCGTTCCGCCGCCGGC GGCGGCGGCGGCGGCCAGAGGCTACCCAGGGTGGGTGATGCTCATGCCCTACGCCACGGC CGAACGCGAGGTCGACGACTCGGAGTACTCCACCTCCAACTCCGGTGGAGCCAAGATCAC CGGGGCGGCCTCCCGCTCCTCGTCCGGCCATCTCGTCCGCGTCTCCCTCCGCCTCGAGTC GCCACCGGCGGCGTCGGGGCTAAGCTTCCACTGCTCACCGTGCGGCGGCTCCGGATACGG AGCTCATCATTACCGGCCCTCGATGTACGTCGTCGCTGCCCACGGCGACTCCGTGCTCCT CGAGATGCATTACCAGAAGGAAGGGTACCAACAATACGGGATCGATTACTTCTTCTACAA TGCCGGCGACGGCGACGAGGACCCACCACGGCGGCCGCCGTCGTTGTCGCTCTCCCGACT TATCAGGGTACCAATACCAAGCCGCCCCGGCTGCGTGGAGGTAGCACCGGCCTCCTCGTG CGCCGCTGCGGCGACGACGACGACGACGAGCTCGTGGTGGCGGCGCTCCTCACCGAGGAG TACCGCAGGCGCGACACGCTGGAGGGCGCCGAGCTCGTCGTGCTCCGCTCCGGCGAGTGG AGCGCCACGCCGATCGCGCCGATCGTCCACGACGACGGCAAGGGCGAGGAGCTCTCCTAC TGGGAGACCGACATGGCCGTCCCCGTCGGCGACCGGCTGCTGTGCTACGTCGACCTGTAC CGCGGCGTCATCCTCTGCGGCGACGACCTGTTCGACGAAATTCCCCCGCGGCTGCAGTAC GTGTCGCTCCCCGTGGAGGCCCCCGCCGGCGCGTTCGACGAGGAGCACTTCGACCGCCAG GGCGACAACTATCGGCGTTGTCTGCTCAACACTCGAACCGTCGTCTGCGCCATCGACGGC GGCGGCGCCGCGCTCAAATTCGTCGACATCTCCTCCCGCTGCTGCTGCGGCAGCCTGGGC AAGCACACCACCTGCGACCGTTCGAGCCGCGCCTTCGTCATCAGAACCTGGACACTGAGG ATCGACGGCGACGGCGACGACGACATGGCGTGGACCATGGACGCCATGATCGACGCCGCC GAGCTTGGTCCCTCGACGCCTACTCCGCCCTCCCACGGAGCTTTCCACTACACCCCATAG TGAGCATGGATGATCCAAATCTCGTCTGCCTCATTGTGGACGAAGAACGCAAACGGGGTG CACATTACGTCGCCGAAGAGGTGGTATGGAAGATCATGATGGATACAAGGAGCAAGGCAC TAGTGTCGGTTTGGCGCGGCGACGGTCGGTGCCATTGGCGACAGCCACATGGATACACTT GTATTCCTGTCAAAATCCCTGACTGCTTTGCTACCTATGTGAGTTATAGCAAAGCCACGA CAATGTTGCCAGCGATGGTCGACAAGATACCAATTGCAACACCAACTGCAACCGGAACTG GCACTAATTTGTCGCAATCTTTGCCATCCGAGTCATCTCCCCAAAGTCTGTATGTGTTAA TGGCTTCTCCTGGGGAGATCTTGGTAGCACTTGAAGAGATACCTGGGTTGGATTGTGATG ATTTGCTAACAGCTTATAGCATTCTTTGTCGTGACAATGGCCGTCTATTCAAAGCCCTTA TGGGGCTCCCAATGAGTATGAGGAAGAAATTGTTGCTGATAGAAATTAAGGCTTATCTAA ACTGTCATGTCTGCTCTACATGTACAACATGATCATGATATATTGGAA



consensusID : consensus_2652#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1684
fasta sequence
                              [AGAGATGGGTTATCTGTGACGGGTGTTTCATCCGTCACAGGTGATTTTGTCATCAGTGACCACTAATCACTGACCAAGACCAAACCCGTCAAAGGTGAGGGTTTGGGCCCGTCAGAGATGACCTGGTCCGGCGTAGTGTGAGCTTCCGCTGCTCCCCGTGCGGCAAGGACGGACCCTCGATGGACCTCGTCGCTGACCACGACGACCACTCCGTAGTGCTCCTCGAGATGCGTTACGACAAGGAAGGCTACGACGAATTCGGGATCGATTACTTCGTCTACAATTACGCCGCCGCCGACGACGACGGCGACGACGATGACCCACCACGGCCGCCGTCGTTGTCGCTGCTCCCGTCCTACTGGGATCCATTGGACGAGGACGAAAGAAGGCGGCGTCAGGATCCGAAGGTGCACCAGCTGGACGCAGATAGCACCGGCCTCCTCCGCCGCCGCCGCCGCCGCCACGGCGAGGACGACCTCGTGGTGGCGGAGCTCATCACCACCAGGGAGAGCGAGAGCAGCAAGCTGGAGGAGGTCAAGCTCCTCGTGCTCCGCTCCGGCGAGTGGAGCGTCACGCGGGCGGAGATCATCCACGACGGCAGCAAGGGCGAGGAGCTCTCCTACTGGGAGACCGACATGGCCGTCCCCGTCGGCGACCGGCGGCTCTGCTGGGTCGACCTGTACCGCGGCGTCATCCTCTGCGGCGACGACCTGTTCGACGAAATTCCCCCGCGGCTGCAGTACGTGCCGCTCCCCGTGGAGGCCCCCGCCGGCGAATTCGAGGAGGACAGCGACGACGAGAGCACGCGGAGATGCCTGATGGCGAGCTCAAGTTCATCGACGTCTTCCCCCGCTGCTGCTGCGGCGACCCCGGCGCCACCCTCTGCGACCATTCTCGCCACGCCTTCGTCATCAACATCTGGACACTCAGGATCGACGGCGACGGCGACCACACCATGTTGTCATGGACCATGGACGCCATGATCGACGCCACCGAGCTCTGGTCCCTCGACGCCTACGCCGGCATCCCACGTGTCATCCCGGAGTACCCTGTCATCAGCACAGACGACGCTGACGTCATCTGCTTCCTCGTGACCGAGCCATACAATCACAAACAGGGGAAACCCTATTTCGAAAGAACGACATGGGAGATGACGATGGACACCAAGAACAAGACACTGCTATCAGTATGCACATACGATGATGATATTTCCCAACGAGAGCCATCTTATGGACACACTTACATTCCAAACAATTTTGCTACAAAGCCACCACCGGCCATCATCTGCGAGGCAACGACGACGATCACAACCGAAATCAACGGTAATAATCTGTCGCAATCTTTGCCATCTGCCAAACATCTGCAGGTGTCAAGGATGGCTCCTGAGGAGATATTGGTAGCACTTGAAGAGATTCCTGAGCTTTCTCGCGATGATTTGCTGAAAGCGTATAGTATTCTTTGCCGTGACAATGGCCGCCTATTTAGGTCTCTTCTTGGGCTCCCAATGAGTCTGAGGAAGAAGTGGCTGTTGATAGAAATTAAGGCTTGTCGAGATTGTCCCGTTGCAGTGCATGTACAACTGATGGCCTATAACATGATTGATTAAAATATTTGTTATAGTGGTACTTGTATACACTTGTGGGATTAACTGTGCTAATTCTGCTGAATTAAGTTCCTTATTTGT]

[+] EMBL AK109815             [AGAGATGGGTTATCTGTGACGGGTGTTTCATCCGTCACAGGTGATTTTGTCATCAGTGACCACTAATCACTGACCAAGACCAAACCCGTCAAAGGTGAGGGTTTGGGCCCGTCAGAGATGACCTGGTCCGGCGTAGTGTGAGCTTCCGCTGCTCCCCGTGCGGCAAGGACGGACCCTCGATGGACCTCGTCGCTGACCACGACGACCACTCCGTAGTGCTCCTCGAGATGCGTTACGACAAGGAAGGCTACGACGAATTCGGGATCGATTACTTCGTCTACAATTACGCCGCCGCCGACGACGACGGCGACGACGATGACCCACCACGGCCGCCGTCGTTGTCGCTGCTCCCGTCCTACTGGGATCCATTGGACGAGGACGAAAGAAGGCGGCGTCAGGATCCGAAGGTGCACCAGCTGGACGCAGATAGCACCGGCCTCCTCCGCCGCCGCCGCCGCCGCCACGGCGAGGACGACCTCGTGGTGGCGGAGCTCATCACCACCAGGGAGAGCGAGAGCAGCAAGCTGGAGGAGGTCAAGCTCCTCGTGCTCCGCTCCGGCGAGTGGAGCGTCACGCGGGCGGAGATCATCCACGACGGCAGCAAGGGCGAGGAGCTCTCCTACTGGGAGACCGACATGGCCGTCCCCGTCGGCGACCGGCGGCTCTGCTGGGTCGACCTGTACCGCGGCGTCATCCTCTGCGGCGACGACCTGTTCGACGAAATTCCCCCGCGGCTGCAGTACGTGCCGCTCCCCGTGGAGGCCCCCGCCGGCGAATTCGAGGAGGACAGCGACGACGAGAGCACGCGGAGATGCCTGATGGCGAGCTCAAGTTCATCGACGTCTTCCCCCGCTGCTGCTGCGGCGACCCCGGCGCCACCCTCTGCGACCATTCTCGCCACGCCTTCGTCATCAACATCTGGACACTCAGGATCGACGGCGACGGCGACCACACCATGTTGTCATGGACCATGGACGCCATGATCGACGCCACCGAGCTCTGGTCCCTCGACGCCTACGCCGGCATCCCACGTGTCATCCCGGAGTACCCTGTCATCAGCACAGACGACGCTGACGTCATCTGCTTCCTCGTGACCGAGCCATACAATCACAAACAGGGGAAACCCTATTTCGAAAGAACGACATGGGAGATGACGATGGACACCAAGAACAAGACACTGCTATCAGTATGCACATACGATGATGATATTTCCCAACGAGAGCCATCTTATGGACACACTTACATTCCAAACAATTTTGCTACAAAGCCACCACCGGCCATCATCTGCGAGGCAACGACGACGATCACAACCGAAATCAACGGTAATAATCTGTCGCAATCTTTGCCATCTGCCAAACATCTGCAGGTGTCAAGGATGGCTCCTGAGGAGATATTGGTAGCACTTGAAGAGATTCCTGAGCTTTCTCGCGATGATTTGCTGAAAGCGTATAGTATTCTTTGCCGTGACAATGGCCGCCTATTTAGGTCTCTTCTTGGGCTCCCAATGAGTCTGAGGAAGAAGTGGCTGTTGATAGAAATTAAGGCTTGTCGAGATTGTCCCGTTGCAGTGCATGTACAACTGATGGCCTATAACATGATTGATTAAAATATTTGTTATAGTGGTACTTGTATACACTTGTGGGATTAACTGTGCTAATTCTGCTGAATTAAGTTCCTTATTTGT]


>consensus_2652#1 AGAGATGGGTTATCTGTGACGGGTGTTTCATCCGTCACAGGTGATTTTGTCATCAGTGAC CACTAATCACTGACCAAGACCAAACCCGTCAAAGGTGAGGGTTTGGGCCCGTCAGAGATG ACCTGGTCCGGCGTAGTGTGAGCTTCCGCTGCTCCCCGTGCGGCAAGGACGGACCCTCGA TGGACCTCGTCGCTGACCACGACGACCACTCCGTAGTGCTCCTCGAGATGCGTTACGACA AGGAAGGCTACGACGAATTCGGGATCGATTACTTCGTCTACAATTACGCCGCCGCCGACG ACGACGGCGACGACGATGACCCACCACGGCCGCCGTCGTTGTCGCTGCTCCCGTCCTACT GGGATCCATTGGACGAGGACGAAAGAAGGCGGCGTCAGGATCCGAAGGTGCACCAGCTGG ACGCAGATAGCACCGGCCTCCTCCGCCGCCGCCGCCGCCGCCACGGCGAGGACGACCTCG TGGTGGCGGAGCTCATCACCACCAGGGAGAGCGAGAGCAGCAAGCTGGAGGAGGTCAAGC TCCTCGTGCTCCGCTCCGGCGAGTGGAGCGTCACGCGGGCGGAGATCATCCACGACGGCA GCAAGGGCGAGGAGCTCTCCTACTGGGAGACCGACATGGCCGTCCCCGTCGGCGACCGGC GGCTCTGCTGGGTCGACCTGTACCGCGGCGTCATCCTCTGCGGCGACGACCTGTTCGACG AAATTCCCCCGCGGCTGCAGTACGTGCCGCTCCCCGTGGAGGCCCCCGCCGGCGAATTCG AGGAGGACAGCGACGACGAGAGCACGCGGAGATGCCTGATGGCGAGCTCAAGTTCATCGA CGTCTTCCCCCGCTGCTGCTGCGGCGACCCCGGCGCCACCCTCTGCGACCATTCTCGCCA CGCCTTCGTCATCAACATCTGGACACTCAGGATCGACGGCGACGGCGACCACACCATGTT GTCATGGACCATGGACGCCATGATCGACGCCACCGAGCTCTGGTCCCTCGACGCCTACGC CGGCATCCCACGTGTCATCCCGGAGTACCCTGTCATCAGCACAGACGACGCTGACGTCAT CTGCTTCCTCGTGACCGAGCCATACAATCACAAACAGGGGAAACCCTATTTCGAAAGAAC GACATGGGAGATGACGATGGACACCAAGAACAAGACACTGCTATCAGTATGCACATACGA TGATGATATTTCCCAACGAGAGCCATCTTATGGACACACTTACATTCCAAACAATTTTGC TACAAAGCCACCACCGGCCATCATCTGCGAGGCAACGACGACGATCACAACCGAAATCAA CGGTAATAATCTGTCGCAATCTTTGCCATCTGCCAAACATCTGCAGGTGTCAAGGATGGC TCCTGAGGAGATATTGGTAGCACTTGAAGAGATTCCTGAGCTTTCTCGCGATGATTTGCT GAAAGCGTATAGTATTCTTTGCCGTGACAATGGCCGCCTATTTAGGTCTCTTCTTGGGCT CCCAATGAGTCTGAGGAAGAAGTGGCTGTTGATAGAAATTAAGGCTTGTCGAGATTGTCC CGTTGCAGTGCATGTACAACTGATGGCCTATAACATGATTGATTAAAATATTTGTTATAG TGGTACTTGTATACACTTGTGGGATTAACTGTGCTAATTCTGCTGAATTAAGTTCCTTAT TTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2652#0      TGGCTTGCCGGTGAGGCGGTAAGTATTCCAAATAAACTCATCTAGGTTTTTGTACCCATA 60
consensus_2652#1      ------------------------------------------------------------
                                                                                  

consensus_2652#0      CGTAAATAAACACGTGATCTCCAAAACTCCGATCGATCGGCTCGCGGCGCCGCTCATGGA 120
consensus_2652#1      ------------------------------------------------------------
                                                                                  

consensus_2652#0      AACCCTACGGCCGGTTGCGACGGCGACGGCGACGCTGCCTTCCGGCGTTCCGCCGCCGGC 180
consensus_2652#1      ------------------------------------------------------------
                                                                                  

consensus_2652#0      GGCGGCGGCGGCGGCCAGAGGCTACCCAGGGTGGGTGATGCTCATGCCCTACGCCACGGC 240
consensus_2652#1      ------------------------------------------------------------
                                                                                  

consensus_2652#0      CGAACGCGAGGTCGACGACTCGGAGTACTCCACCTCCAACTCCGGTGGAGCCAAGATCAC 300
consensus_2652#1      --AGAGATGGGTTATCTGTGACGGGTGTTTCA--TCCGTCACAGGTGATTTTGTCATCAG 56
                        *  *   ***   *      * **  * **  ***  * * ****        **** 

consensus_2652#0      CGGGGCGGCCTCCCGCTCCTCGTCCGGCCATCTC----GTCCGCGTCTCCCTCCGCCTCG 356
consensus_2652#1      TGACCACTAATCACTGACCAAGACCAAACCCGTCAAAGGTGAGGGTTTGGGCCCGTCAGA 116
                       *        ** *   **  * **   *   **    **  * ** *    *** *   

consensus_2652#0      AGTCGCCACCGGCGGCGTCGGGGCTAAGCTTCCACTGCTCACCGTGCGGCGGCTCCGGAT 416
consensus_2652#1      GATGACCTGGTCCGGCGTAGTG--TGAGCTTCCGCTGCTCCCCGTGCGGCAAGGACGGA- 173
                        *  **     ****** * *  * ******* ****** *********     **** 

consensus_2652#0      ACGGAGCTCATCATTACCGGCCCTCGATGTACGTCGTCGCTGCCCACGGCGACTCC---- 472
consensus_2652#1      --------------------CCCTCGATGGACCTCGTCGCTGACCACGACGACCACTCCG 213
                                          ********* ** ********* ***** ****  *    

consensus_2652#0      --GTGCTCCTCGAGATGCATTACCAGAAGGAAGGGTACCAACAATACGGGATCGATTACT 530
consensus_2652#1      TAGTGCTCCTCGAGATGCGTTACGACAAGGAAGGCTACGACGAATTCGGGATCGATTACT 273
                        **************** **** * ******** *** *  *** **************

consensus_2652#0      TCTTCTACAAT------------GCCGGCGACGGCGACGAGGACCCACCACGGCGGCCGC 578
consensus_2652#1      TCGTCTACAATTACGCCGCCGCCGACGACGACGGCGACGACGATGACCCACCACGGCCGC 333
                      ** ********            * ** ************ **    ****  *******

consensus_2652#0      CGTCGTTGTCGCT-CTCCCGACTTATCAGGGTACC------------------------- 612
consensus_2652#1      CGTCGTTGTCGCTGCTCCCGTCCTACTGGGATCCATTGGACGAGGACGAAAGAAGGCGGC 393
                      ************* ****** * **   ** * *                          

consensus_2652#0      -----AATACCAAGCCGCCCCGGCTGCGTGGAGGTAGCACCGGCCTCCTCGTGCGCCGCT 667
consensus_2652#1      GTCAGGATCCGAAGGTGCACCAGCTGGACGCAGATAGCACCGGCCTCCTCCGCCGCCGCC 453
                            ** * ***  ** ** ****   * ** ****************   ****** 

consensus_2652#0      GCGGCGACGACGACGACGACGAGCTCGTGGTGGCGGCGCTCCTCACCGAGGAGTACCGCA 727
consensus_2652#1      GCCGCCGCCACGGCGAGGACGACCTCGTGGTGGCGGAGCTCATCACCACCAGGGAGAGCG 513
                      ** **  * *** *** ***** ************* **** *****     * *  ** 

consensus_2652#0      GGCGCGACACGCTGGAGGGCGCCGAGCTCGTCGTGCTCCGCTCCGGCGAGTGGAGCGCCA 787
consensus_2652#1      AGAGCAGCAAGCTGGAGGAGGTCAAGCTCCTCGTGCTCCGCTCCGGCGAGTGGAGCGTCA 573
                       * **  ** ********  * * ***** *************************** **

consensus_2652#0      CGCCGATCGCGCCGATCGTCCACGACGACGGCAAGGGCGAGGAGCTCTCCTACTGGGAGA 847
consensus_2652#1      CGCGG---GCGGAGATCATCCACGACGGCAGCAAGGGCGAGGAGCTCTCCTACTGGGAGA 630
                      *** *   ***  **** ********* * ******************************

consensus_2652#0      CCGACATGGCCGTCCCCGTCGGCGACCGGCTGCTGTGCTACGTCGACCTGTACCGCGGCG 907
consensus_2652#1      CCGACATGGCCGTCCCCGTCGGCGACCGGCGGCTCTGCTGGGTCGACCTGTACCGCGGCG 690
                      ****************************** *** ****  *******************

consensus_2652#0      TCATCCTCTGCGGCGACGACCTGTTCGACGAAATTCCCCCGCGGCTGCAGTACGTGTCGC 967
consensus_2652#1      TCATCCTCTGCGGCGACGACCTGTTCGACGAAATTCCCCCGCGGCTGCAGTACGTGCCGC 750
                      ******************************************************** ***

consensus_2652#0      TCCCCGTGGAGGCCCCCGCCGGCGCGTTCGACGAGGAGCACTTCGACCGCCAGGGCGACA 1027
consensus_2652#1      TCCCCGTGGAGGCCCCCGCCGGCGAATTCGAGGAGGA---------CAGCGACGACGAGA 801
                      ************************  ***** *****         * ** * * *** *

consensus_2652#0      ACTATCGGCGTTGTCTGCTCAACACTCGAACCGTCGTCTGCGCCATCGACGGCGGCGGCG 1087
consensus_2652#1      GCACGCGGAGATGCCTG-------------------------------ATGGCGA----- 825
                       *   *** * ** ***                               * ****      

consensus_2652#0      CCGCGCTCAAATTCGTCGACATCTCCTCCCGCTGCTGCTGCGGCAGCCTGGGCAAGCACA 1147
consensus_2652#1      ----GCTCAAGTTCATCGACGTCTTCCCCCGCTGCTGCTGCGGCGACCCCGGCGC---CA 878
                          ****** *** ***** *** * *****************  **  ***     **

consensus_2652#0      CCACCTGCGACCGTTCGAGCCGCGCCTTCGTCATCAGAACCTGGACACTGAGGATCGACG 1207
consensus_2652#1      CCCTCTGCGACCATTCTCGCCACGCCTTCGTCATCAACATCTGGACACTCAGGATCGACG 938
                      **  ******** ***  *** **************  * ********* **********

consensus_2652#0      GCGACGGCGACGACGACATGGCGT---GGACCATGGACGCCATGATCGACGCCGCCGAGC 1264
consensus_2652#1      GCGACGGCGACCACACCATGTTGTCATGGACCATGGACGCCATGATCGACGCCACCGAGC 998
                      *********** **  ****  **   ************************** ******

consensus_2652#0      T-TGGTCCCTCGACGCCTACTCCGCCCTCCCACGGAGCTTTCCACTACACCCCATAGTGA 1323
consensus_2652#1      TCTGGTCCCTCGACGCCTACGCCGGCATCCCACGTGTCATCCCGGAGTACCCTGTCATCA 1058
                      * ****************** *** * *******   * * **     ****  *  * *

consensus_2652#0      GCATGGATGATCCAAATCTCGTCTGCCTCATTGTGGACGAA------GAACGCAAACGGG 1377
consensus_2652#1      GCACAGACGACGCTGACGTCATCTGCTTCCTCGTGACCGAGCCATACAATCACAAACAGG 1118
                      ***  ** **  *  *  ** ***** ** * ***  ***        * * ***** **

consensus_2652#0      GTGCACATTACGTCGCCGAAGAGGTGGTATGGAAGATCATGATGGATACAAGGAGCAAGG 1437
consensus_2652#1      GGAAACCCTATTT---CGAAAGAACGACATGGGAGATGACGATGGACACCAAGAACAAGA 1175
                      *   **  **  *   ****     *  **** **** * ****** ** * ** **** 

consensus_2652#0      CACTAGTGTCGGTTTG---GCGCGGCGACGGTCGGTGCCATTGGCGACAGCCACATGGAT 1494
consensus_2652#1      CACTGCTATCAGTATGCACATACGATGATGATATTTCCCAACGAGAGCCATCTTATGGAC 1235
                      ****  * ** ** **      **  ** * *   * ***  *    *   *  ***** 

consensus_2652#0      ACACTTGTATTCCTGTCAAAATCCCTGACTGCTTTGCTACCTATGTGAGTTATAGCAAAG 1554
consensus_2652#1      ACACTTACATTCCAAACAA------------TTTTGCTAC----------------AAAG 1267
                      ******  *****   ***             ********                ****

consensus_2652#0      CCACGACAATGTTGCCAGCGATGGTCGACAAGATACCAATTGCAACACCAACTGCAACCG 1614
consensus_2652#1      CCACCAC--------CGGCCATCATCTGCGAGGCAACGACGACGATCACAACCGAAATC- 1318
                      **** **        * ** **  **  * **  * * *   * *   **** * ** * 

consensus_2652#0      GAACTGGCACTAATTTGTCGCAATCTTTGCCATCCGAGTCATCTCCCCAAAGTCTGTATG 1674
consensus_2652#1      --AACGGTAATAATCTGTCGCAATCTTTGCCATCTG---------CCAAACATCTGCAGG 1367
                        *  ** * **** ******************* *         ** **  **** * *

consensus_2652#0      TGTTAATGGCTTCTCCTGGGGAGATCTTGGTAGCACTTGAAGAGATACCTGGGTTGGATT 1734
consensus_2652#1      TGTCAAGGATGGCTCCTGAGGAGATATTGGTAGCACTTGAAGAGATTCCTGAGCTTTCTC 1427
                      *** ** *    ****** ****** ******************** **** * *   * 

consensus_2652#0      GTGATGATTTGCTAACAGCTTATAGCATTCTTTGTCGTGACAATGGCCGTCTATTCAAAG 1794
consensus_2652#1      GCGATGATTTGCTGAAAGCGTATAGTATTCTTTGCCGTGACAATGGCCGCCTATTTAGGT 1487
                      * *********** * *** ***** ******** ************** ***** *   

consensus_2652#0      CCCTTATGGGGCTCCCAATGAGTATGAGGAAGAAATTGTTGCTGATAGAAATTAAGGCTT 1854
consensus_2652#1      CTCTTCTTGGGCTCCCAATGAGTCTGAGGAAGAAGTGGCTGTTGATAGAAATTAAGGCTT 1547
                      * *** * *************** ********** * * ** ******************

consensus_2652#0      ATCTAAACTGTCATGTCTGCTCTACATGTACAAC--ATGATC-ATGATATATTGGAA--- 1908
consensus_2652#1      GTCGAGATTGTCCCGT-TGCAGTGCATGTACAACTGATGGCCTATAACATGATTGATTAA 1606
                       ** * * ****  ** ***  * **********  ***  * ** * **  * **    

consensus_2652#0      ------------------------------------------------------------
consensus_2652#1      AATATTTGTTATAGTGGTACTTGTATACACTTGTGGGATTAACTGTGCTAATTCTGCTGA 1666
                                                                                  

consensus_2652#0      ------------------
consensus_2652#1      ATTAAGTTCCTTATTTGT 1684
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)