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Oryza sativa
cluster # 2662 cluster # 2662       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2662#0 length = 1613 sequences # 1  
consensus_2662#1 length = 1604 sequences # 1  

consensusID : consensus_2662#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1613
fasta sequence
                              [CCGCACCGCACGCCGACATCGCCGGAGAGGGCGCCGCTCGCCGGCATCGTCGTCGCCGGAGACTCGTCCGTCCATCCGCAAGGGAGTCCAGCAATACTCCATCATGCAAAGCCCCAGCAAGGTTTCTGAAGCCTCTGGCTCAGCACCCCCTGCCACGTCTGTGATCGAAGGTTGGGCAGAACTCCCAGAGGGCCTGCTTCACTCCATTGTTGCTCTATTGGGCTCTTTCCTTGACCTCCTTGCCTTCACTGGCACCTGCCATTCTTGGCGTGCTGCCTTCTCATCCTACCCATCAAAATCTAACTTTCGCACCATACTCCCACCCCTCCTCGTCCGACCCAATGTCCGCGTCAAAGCCCCTTATAGCAGCAATGGTCATCGCAAGCTACGCTCGTGTGAGGTCATTGATCTAGCCAACCGAAACACCCCACTCCGCTGCCAGATTCCTCAAGAAACTCTGCAGAGGATGCATTTTGCAGGTTCTTCCCATGGTCAGCTCATCTGCTGCCGCCGTGGTTATTGTCTTGTTGTTGATGTGTTCACCGGTGCTGAGGTTTCACCTCCACGCCTTCCATTCAGTGAGAACTGTGATGAGTTCTACTACTGTGGCATTCTGACGGCTCCTATCACGTCACCTAACTCACATCTCATTATCAGCACTCAGTCCTCCCTGTTTGATTGGCCAGTTGGAAGTGACTCTTGGTCTGAGCTCAAGCTGCCCGTTAATCGGGTCGATCAGATTGTGGAATTCAATGGTCAGCTCATCGCTGTGATTGAATACAGTCTGTACACTTTGCAGTTGGCCCCCATTCTTCGCTTGGAAAAGATAAAAACTCTCTGGTGGGATAACATGAATGAATGTCCGTATATGAGACCATGGTTTGTGGTTTGTGGTGACATGCTTCTCATTGTTGACCACTACATAAGTTTTTCATTTGGAGCACCGGTCCTCTACAGGCCATACCGTCTGGACATGTCGACCAAGCCTGCAAAATGGGTGGAGGTAAAGAAGCTGGAGAACTGGGCACTCTTCATTGGGGGTGATGCAAGGAGCCCTCCATTTTCTTTCAAGAACCCGGAGCGCTGGGGAGGGAGGAGCAACTGCTTGTACTATGCTCACTACTCTCAGCCATTGAGCCTGCATGGGTTAGGTGATGATGCAGATGCTGTGTGGGATCCTAACACTGATGACAACCTCGTGTTCAAAAGAAACTGGTACCGCCAGCTGCAGGCCTTGTGGGTGTACCCAAGCATGTTCTATTCAGCGGGAGACGGCCAGTGATTGCTGCACAAGAGCTCTGCTCTTATCATCTGATTCTGAGACTCTCTTCTGAATTCTGATGTAGGGCAGAGCATCTTAATGCTTAGCTTAATAATACTTGCAGTCGTTTTGTAGCTCAGTTGTTAGCTGCATTCTCTAGTCTAATATTTTCGAGGTGCACTGGATGCTTTTGTACCTAAACTATTAGTAGCTGTTGCTTTTATGCTGGAAGTCTGGATTCTGGAACTCGCTACCGTTGAGGATTTCCACTGGTGATGGAGATAATGTTTCGTTTTACGAGTGTTTGAGCTTAGCTGCTATATTTTGGAACATTAATATATATTCTTGTGTG]

[+] EMBL AK072974             [CCGCACCGCACGCCGACATCGCCGGAGAGGGCGCCGCTCGCCGGCATCGTCGTCGCCGGAGACTCGTCCGTCCATCCGCAAGGGAGTCCAGCAATACTCCATCATGCAAAGCCCCAGCAAGGTTTCTGAAGCCTCTGGCTCAGCACCCCCTGCCACGTCTGTGATCGAAGGTTGGGCAGAACTCCCAGAGGGCCTGCTTCACTCCATTGTTGCTCTATTGGGCTCTTTCCTTGACCTCCTTGCCTTCACTGGCACCTGCCATTCTTGGCGTGCTGCCTTCTCATCCTACCCATCAAAATCTAACTTTCGCACCATACTCCCACCCCTCCTCGTCCGACCCAATGTCCGCGTCAAAGCCCCTTATAGCAGCAATGGTCATCGCAAGCTACGCTCGTGTGAGGTCATTGATCTAGCCAACCGAAACACCCCACTCCGCTGCCAGATTCCTCAAGAAACTCTGCAGAGGATGCATTTTGCAGGTTCTTCCCATGGTCAGCTCATCTGCTGCCGCCGTGGTTATTGTCTTGTTGTTGATGTGTTCACCGGTGCTGAGGTTTCACCTCCACGCCTTCCATTCAGTGAGAACTGTGATGAGTTCTACTACTGTGGCATTCTGACGGCTCCTATCACGTCACCTAACTCACATCTCATTATCAGCACTCAGTCCTCCCTGTTTGATTGGCCAGTTGGAAGTGACTCTTGGTCTGAGCTCAAGCTGCCCGTTAATCGGGTCGATCAGATTGTGGAATTCAATGGTCAGCTCATCGCTGTGATTGAATACAGTCTGTACACTTTGCAGTTGGCCCCCATTCTTCGCTTGGAAAAGATAAAAACTCTCTGGTGGGATAACATGAATGAATGTCCGTATATGAGACCATGGTTTGTGGTTTGTGGTGACATGCTTCTCATTGTTGACCACTACATAAGTTTTTCATTTGGAGCACCGGTCCTCTACAGGCCATACCGTCTGGACATGTCGACCAAGCCTGCAAAATGGGTGGAGGTAAAGAAGCTGGAGAACTGGGCACTCTTCATTGGGGGTGATGCAAGGAGCCCTCCATTTTCTTTCAAGAACCCGGAGCGCTGGGGAGGGAGGAGCAACTGCTTGTACTATGCTCACTACTCTCAGCCATTGAGCCTGCATGGGTTAGGTGATGATGCAGATGCTGTGTGGGATCCTAACACTGATGACAACCTCGTGTTCAAAAGAAACTGGTACCGCCAGCTGCAGGCCTTGTGGGTGTACCCAAGCATGTTCTATTCAGCGGGAGACGGCCAGTGATTGCTGCACAAGAGCTCTGCTCTTATCATCTGATTCTGAGACTCTCTTCTGAATTCTGATGTAGGGCAGAGCATCTTAATGCTTAGCTTAATAATACTTGCAGTCGTTTTGTAGCTCAGTTGTTAGCTGCATTCTCTAGTCTAATATTTTCGAGGTGCACTGGATGCTTTTGTACCTAAACTATTAGTAGCTGTTGCTTTTATGCTGGAAGTCTGGATTCTGGAACTCGCTACCGTTGAGGATTTCCACTGGTGATGGAGATAATGTTTCGTTTTACGAGTGTTTGAGCTTAGCTGCTATATTTTGGAACATTAATATATATTCTTGTGTG]


>consensus_2662#0 CCGCACCGCACGCCGACATCGCCGGAGAGGGCGCCGCTCGCCGGCATCGTCGTCGCCGGA GACTCGTCCGTCCATCCGCAAGGGAGTCCAGCAATACTCCATCATGCAAAGCCCCAGCAA GGTTTCTGAAGCCTCTGGCTCAGCACCCCCTGCCACGTCTGTGATCGAAGGTTGGGCAGA ACTCCCAGAGGGCCTGCTTCACTCCATTGTTGCTCTATTGGGCTCTTTCCTTGACCTCCT TGCCTTCACTGGCACCTGCCATTCTTGGCGTGCTGCCTTCTCATCCTACCCATCAAAATC TAACTTTCGCACCATACTCCCACCCCTCCTCGTCCGACCCAATGTCCGCGTCAAAGCCCC TTATAGCAGCAATGGTCATCGCAAGCTACGCTCGTGTGAGGTCATTGATCTAGCCAACCG AAACACCCCACTCCGCTGCCAGATTCCTCAAGAAACTCTGCAGAGGATGCATTTTGCAGG TTCTTCCCATGGTCAGCTCATCTGCTGCCGCCGTGGTTATTGTCTTGTTGTTGATGTGTT CACCGGTGCTGAGGTTTCACCTCCACGCCTTCCATTCAGTGAGAACTGTGATGAGTTCTA CTACTGTGGCATTCTGACGGCTCCTATCACGTCACCTAACTCACATCTCATTATCAGCAC TCAGTCCTCCCTGTTTGATTGGCCAGTTGGAAGTGACTCTTGGTCTGAGCTCAAGCTGCC CGTTAATCGGGTCGATCAGATTGTGGAATTCAATGGTCAGCTCATCGCTGTGATTGAATA CAGTCTGTACACTTTGCAGTTGGCCCCCATTCTTCGCTTGGAAAAGATAAAAACTCTCTG GTGGGATAACATGAATGAATGTCCGTATATGAGACCATGGTTTGTGGTTTGTGGTGACAT GCTTCTCATTGTTGACCACTACATAAGTTTTTCATTTGGAGCACCGGTCCTCTACAGGCC ATACCGTCTGGACATGTCGACCAAGCCTGCAAAATGGGTGGAGGTAAAGAAGCTGGAGAA CTGGGCACTCTTCATTGGGGGTGATGCAAGGAGCCCTCCATTTTCTTTCAAGAACCCGGA GCGCTGGGGAGGGAGGAGCAACTGCTTGTACTATGCTCACTACTCTCAGCCATTGAGCCT GCATGGGTTAGGTGATGATGCAGATGCTGTGTGGGATCCTAACACTGATGACAACCTCGT GTTCAAAAGAAACTGGTACCGCCAGCTGCAGGCCTTGTGGGTGTACCCAAGCATGTTCTA TTCAGCGGGAGACGGCCAGTGATTGCTGCACAAGAGCTCTGCTCTTATCATCTGATTCTG AGACTCTCTTCTGAATTCTGATGTAGGGCAGAGCATCTTAATGCTTAGCTTAATAATACT TGCAGTCGTTTTGTAGCTCAGTTGTTAGCTGCATTCTCTAGTCTAATATTTTCGAGGTGC ACTGGATGCTTTTGTACCTAAACTATTAGTAGCTGTTGCTTTTATGCTGGAAGTCTGGAT TCTGGAACTCGCTACCGTTGAGGATTTCCACTGGTGATGGAGATAATGTTTCGTTTTACG AGTGTTTGAGCTTAGCTGCTATATTTTGGAACATTAATATATATTCTTGTGTG



consensusID : consensus_2662#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1604
fasta sequence
                              [ATCGCCGGAGAGGTCGCCGGCGGCATCGTCGTCCTCCCCGTCGCCGGAGATCGGACCTCCTCCACAAGGGAGTTCGGCAATCTGCCATCATGCAAAGCCCCAGCAAGATCTCTGATGCCTCTGGCTCAATGCCCCCTGCCACGTCTGTGCGCAAAGGTTCCAAGAAGAACTGCTTCACTCCATTGTTCCTCTGTTGGGCTCCTTCGTCGACATTCTCGCCTTTGCTGGCACCTGCCATTCTTGGCGTGCTGCCTTCTCATCATACCCATCAAAATCTGCCTTTCGCACCTTACTCCCACCACTCCTCGTCCGACCCAATGTCCGCGTCAAATCCCCTTGTATCCCTTCTACCAGCAATGGTCCTCACAAGCTACTACGCTCATGTCAGGTCATTGATCTAGCCAACCGAAACACCCCGCTCCGCTGCCAGATTCCTCGAGAAACTCTGCAGAAGATGCTTTTTGCAGGCTCTTCTCATGGTCAACTCATATGCTGCCGCAGTGGTTACTGTCTCGTTGTTGATGTGTTCACCGGTGCTGAGGTTTCACCACCACGTCTTCCATTCAGCAAGGACCATGAGGAGATCTACTTTTGTGGCACTCTGACGGCTCCTATCACGTCACCCAACTCACATCTCCTTATCAGCAACCGGTCATCTCTGTTCGATTGGCCGGTTGGAAGTGACTCCTGGTCTGAGCTCAAGCTTCCTGTTAATCGGGTCGATCAGATTGTGGAATTCAATGGTCAGCTCATCGCCGTGATTGAATACAAGCTGTACACTTTGCAGTTGGCCCCCAAGCTTCGCCTGAAGAAGATGAAAACCCTGTGGTGGGATGACATGAGTGAATGTCCATATTTGAGACCATGGCTAGTGGTTTGCGATGGCATGCTTCTCATTGTTGACCACTACATAACTTTGTCATTTGGAGCACCAGTCAACTACAGACCGTACCGCCTGGACATGTCAGCCAAGCCTGCAAAATGGGTGGAGGTAAAGAAGCTGGAGAACTGGGCACTCTTTATCGGGGGTGATGCGAGAAGCCCGCCGTTTGCTTTCAAGAACCCGGAGCGCTGGGGAGGGAGGAGCAACTGCTTGTACTATGCTCACTACTCCCAGCCATGGAGCCTTCATGGGTTGGGTGATGATGCAGATGCTGTGTGGGATCCTACCACTGATGATAACCTTGTGTTCAAAAGAAACTGGTACAGTCAGCTGCAGGCCTTCTGGGTGTATCCAAGCATGTTCTATTCAGACGGAGACGGCCAGTGATTGGCACACGCACGAGTGCCCTGCTCTTATTAGCTTCTTCTAAAATTGCCCCCTTGTGATGTAGAGCAGAGACTTGTGCAACTTGGCCTAGAAATCTAGGAGATCCTCATGGTGGTCTTTATGTCTAGTTTAACACTTGCAGTCGTTTTGTAGTTCAGTTATTAGCTGCATTACCATCTGATAGTAGGGTGTGACTGCACTGGATGCAAGTGTAGTTAACTAGTTGTTGCTTTTCCACTGGTGATGGTAGGTAATGTTTCGTTCTGTAAGGGTTTGGAACTTTTGTTCTTCTTCACAGCAATGGTTTGGAACACTAATGTAATGCTTGTGCACT]

[+] EMBL AK107286             [ATCGCCGGAGAGGTCGCCGGCGGCATCGTCGTCCTCCCCGTCGCCGGAGATCGGACCTCCTCCACAAGGGAGTTCGGCAATCTGCCATCATGCAAAGCCCCAGCAAGATCTCTGATGCCTCTGGCTCAATGCCCCCTGCCACGTCTGTGCGCAAAGGTTCCAAGAAGAACTGCTTCACTCCATTGTTCCTCTGTTGGGCTCCTTCGTCGACATTCTCGCCTTTGCTGGCACCTGCCATTCTTGGCGTGCTGCCTTCTCATCATACCCATCAAAATCTGCCTTTCGCACCTTACTCCCACCACTCCTCGTCCGACCCAATGTCCGCGTCAAATCCCCTTGTATCCCTTCTACCAGCAATGGTCCTCACAAGCTACTACGCTCATGTCAGGTCATTGATCTAGCCAACCGAAACACCCCGCTCCGCTGCCAGATTCCTCGAGAAACTCTGCAGAAGATGCTTTTTGCAGGCTCTTCTCATGGTCAACTCATATGCTGCCGCAGTGGTTACTGTCTCGTTGTTGATGTGTTCACCGGTGCTGAGGTTTCACCACCACGTCTTCCATTCAGCAAGGACCATGAGGAGATCTACTTTTGTGGCACTCTGACGGCTCCTATCACGTCACCCAACTCACATCTCCTTATCAGCAACCGGTCATCTCTGTTCGATTGGCCGGTTGGAAGTGACTCCTGGTCTGAGCTCAAGCTTCCTGTTAATCGGGTCGATCAGATTGTGGAATTCAATGGTCAGCTCATCGCCGTGATTGAATACAAGCTGTACACTTTGCAGTTGGCCCCCAAGCTTCGCCTGAAGAAGATGAAAACCCTGTGGTGGGATGACATGAGTGAATGTCCATATTTGAGACCATGGCTAGTGGTTTGCGATGGCATGCTTCTCATTGTTGACCACTACATAACTTTGTCATTTGGAGCACCAGTCAACTACAGACCGTACCGCCTGGACATGTCAGCCAAGCCTGCAAAATGGGTGGAGGTAAAGAAGCTGGAGAACTGGGCACTCTTTATCGGGGGTGATGCGAGAAGCCCGCCGTTTGCTTTCAAGAACCCGGAGCGCTGGGGAGGGAGGAGCAACTGCTTGTACTATGCTCACTACTCCCAGCCATGGAGCCTTCATGGGTTGGGTGATGATGCAGATGCTGTGTGGGATCCTACCACTGATGATAACCTTGTGTTCAAAAGAAACTGGTACAGTCAGCTGCAGGCCTTCTGGGTGTATCCAAGCATGTTCTATTCAGACGGAGACGGCCAGTGATTGGCACACGCACGAGTGCCCTGCTCTTATTAGCTTCTTCTAAAATTGCCCCCTTGTGATGTAGAGCAGAGACTTGTGCAACTTGGCCTAGAAATCTAGGAGATCCTCATGGTGGTCTTTATGTCTAGTTTAACACTTGCAGTCGTTTTGTAGTTCAGTTATTAGCTGCATTACCATCTGATAGTAGGGTGTGACTGCACTGGATGCAAGTGTAGTTAACTAGTTGTTGCTTTTCCACTGGTGATGGTAGGTAATGTTTCGTTCTGTAAGGGTTTGGAACTTTTGTTCTTCTTCACAGCAATGGTTTGGAACACTAATGTAATGCTTGTGCACT]


>consensus_2662#1 ATCGCCGGAGAGGTCGCCGGCGGCATCGTCGTCCTCCCCGTCGCCGGAGATCGGACCTCC TCCACAAGGGAGTTCGGCAATCTGCCATCATGCAAAGCCCCAGCAAGATCTCTGATGCCT CTGGCTCAATGCCCCCTGCCACGTCTGTGCGCAAAGGTTCCAAGAAGAACTGCTTCACTC CATTGTTCCTCTGTTGGGCTCCTTCGTCGACATTCTCGCCTTTGCTGGCACCTGCCATTC TTGGCGTGCTGCCTTCTCATCATACCCATCAAAATCTGCCTTTCGCACCTTACTCCCACC ACTCCTCGTCCGACCCAATGTCCGCGTCAAATCCCCTTGTATCCCTTCTACCAGCAATGG TCCTCACAAGCTACTACGCTCATGTCAGGTCATTGATCTAGCCAACCGAAACACCCCGCT CCGCTGCCAGATTCCTCGAGAAACTCTGCAGAAGATGCTTTTTGCAGGCTCTTCTCATGG TCAACTCATATGCTGCCGCAGTGGTTACTGTCTCGTTGTTGATGTGTTCACCGGTGCTGA GGTTTCACCACCACGTCTTCCATTCAGCAAGGACCATGAGGAGATCTACTTTTGTGGCAC TCTGACGGCTCCTATCACGTCACCCAACTCACATCTCCTTATCAGCAACCGGTCATCTCT GTTCGATTGGCCGGTTGGAAGTGACTCCTGGTCTGAGCTCAAGCTTCCTGTTAATCGGGT CGATCAGATTGTGGAATTCAATGGTCAGCTCATCGCCGTGATTGAATACAAGCTGTACAC TTTGCAGTTGGCCCCCAAGCTTCGCCTGAAGAAGATGAAAACCCTGTGGTGGGATGACAT GAGTGAATGTCCATATTTGAGACCATGGCTAGTGGTTTGCGATGGCATGCTTCTCATTGT TGACCACTACATAACTTTGTCATTTGGAGCACCAGTCAACTACAGACCGTACCGCCTGGA CATGTCAGCCAAGCCTGCAAAATGGGTGGAGGTAAAGAAGCTGGAGAACTGGGCACTCTT TATCGGGGGTGATGCGAGAAGCCCGCCGTTTGCTTTCAAGAACCCGGAGCGCTGGGGAGG GAGGAGCAACTGCTTGTACTATGCTCACTACTCCCAGCCATGGAGCCTTCATGGGTTGGG TGATGATGCAGATGCTGTGTGGGATCCTACCACTGATGATAACCTTGTGTTCAAAAGAAA CTGGTACAGTCAGCTGCAGGCCTTCTGGGTGTATCCAAGCATGTTCTATTCAGACGGAGA CGGCCAGTGATTGGCACACGCACGAGTGCCCTGCTCTTATTAGCTTCTTCTAAAATTGCC CCCTTGTGATGTAGAGCAGAGACTTGTGCAACTTGGCCTAGAAATCTAGGAGATCCTCAT GGTGGTCTTTATGTCTAGTTTAACACTTGCAGTCGTTTTGTAGTTCAGTTATTAGCTGCA TTACCATCTGATAGTAGGGTGTGACTGCACTGGATGCAAGTGTAGTTAACTAGTTGTTGC TTTTCCACTGGTGATGGTAGGTAATGTTTCGTTCTGTAAGGGTTTGGAACTTTTGTTCTT CTTCACAGCAATGGTTTGGAACACTAATGTAATGCTTGTGCACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2662#0      CCGCACCGCACGCCGACATCGCCGGAGAGGGCGCCGC-----TCGCCGGCATCGTCGTCG 55
consensus_2662#1      -----------------ATCGCCGGAGAGGTCGCCGGCGGCATCGTCGTCCTCCCCGTCG 43
                                       ************* *****      *** ** * **  *****

consensus_2662#0      CCGGAGACTCGTCCGTCCATCCGCAAGGGAGTCCAGCAATACTCCATCATGCAAAGCCCC 115
consensus_2662#1      CCGGAGATCGGACC--TCCTCCACAAGGGAGTTCGGCAATCTGCCATCATGCAAAGCCCC 101
                      *******   * **   * *** ********* * *****   *****************

consensus_2662#0      AGCAAGGTTTCTGAAGCCTCTGGCTCAGCACCCCCTGCCACGTCTGTGATCGAAGGTTGG 175
consensus_2662#1      AGCAAGATCTCTGATGCCTCTGGCTCAATGCCCCCTGCCACGTCTGTGCGCAAAGGTT-- 159
                      ****** * ***** ************   ******************  * ******  

consensus_2662#0      GCAGAACTCCCAGAGGGCCTGCTTCACTCCATTGTTGCTCTATTGGGCTCTTTCCTTGAC 235
consensus_2662#1      --------CCAAGAAGAACTGCTTCACTCCATTGTTCCTCTGTTGGGCTCCTTCGTCGAC 211
                              ** *** *  ****************** **** ******** *** * ***

consensus_2662#0      CTCCTTGCCTTCACTGGCACCTGCCATTCTTGGCGTGCTGCCTTCTCATCCTACCCATCA 295
consensus_2662#1      ATTCTCGCCTTTGCTGGCACCTGCCATTCTTGGCGTGCTGCCTTCTCATCATACCCATCA 271
                       * ** *****  ************************************* *********

consensus_2662#0      AAATCTAACTTTCGCACCATACTCCCACCCCTCCTCGTCCGACCCAATGTCCGCGTCAAA 355
consensus_2662#1      AAATCTGCCTTTCGCACCTTACTCCCACCACTCCTCGTCCGACCCAATGTCCGCGTCAAA 331
                      ******  ********** ********** ******************************

consensus_2662#0      GCCCCTTATAGC---------AGCAATGGTCATCGCAAGCTAC---GCTCGTGTGAGGTC 403
consensus_2662#1      TCCCCTTGTATCCCTTCTACCAGCAATGGTCCTCACAAGCTACTACGCTCATGTCAGGTC 391
                       ****** ** *         ********** ** ********   **** *** *****

consensus_2662#0      ATTGATCTAGCCAACCGAAACACCCCACTCCGCTGCCAGATTCCTCAAGAAACTCTGCAG 463
consensus_2662#1      ATTGATCTAGCCAACCGAAACACCCCGCTCCGCTGCCAGATTCCTCGAGAAACTCTGCAG 451
                      ************************** ******************* *************

consensus_2662#0      AGGATGCATTTTGCAGGTTCTTCCCATGGTCAGCTCATCTGCTGCCGCCGTGGTTATTGT 523
consensus_2662#1      AAGATGCTTTTTGCAGGCTCTTCTCATGGTCAACTCATATGCTGCCGCAGTGGTTACTGT 511
                      * ***** ********* ***** ******** ***** ********* ******* ***

consensus_2662#0      CTTGTTGTTGATGTGTTCACCGGTGCTGAGGTTTCACCTCCACGCCTTCCATTCAGTGAG 583
consensus_2662#1      CTCGTTGTTGATGTGTTCACCGGTGCTGAGGTTTCACCACCACGTCTTCCATTCAGCAAG 571
                      ** *********************************** ***** ***********  **

consensus_2662#0      AACTGTGATGAGTTCTACTACTGTGGCATTCTGACGGCTCCTATCACGTCACCTAACTCA 643
consensus_2662#1      GACCATGAGGAGATCTACTTTTGTGGCACTCTGACGGCTCCTATCACGTCACCCAACTCA 631
                       **  *** *** ******  ******* ************************ ******

consensus_2662#0      CATCTCATTATCAGCACTCAGTCCTCCCTGTTTGATTGGCCAGTTGGAAGTGACTCTTGG 703
consensus_2662#1      CATCTCCTTATCAGCAACCGGTCATCTCTGTTCGATTGGCCGGTTGGAAGTGACTCCTGG 691
                      ****** *********  * *** ** ***** ******** ************** ***

consensus_2662#0      TCTGAGCTCAAGCTGCCCGTTAATCGGGTCGATCAGATTGTGGAATTCAATGGTCAGCTC 763
consensus_2662#1      TCTGAGCTCAAGCTTCCTGTTAATCGGGTCGATCAGATTGTGGAATTCAATGGTCAGCTC 751
                      ************** ** ******************************************

consensus_2662#0      ATCGCTGTGATTGAATACAGTCTGTACACTTTGCAGTTGGCCCCCATTCTTCGCTTGGAA 823
consensus_2662#1      ATCGCCGTGATTGAATACAAGCTGTACACTTTGCAGTTGGCCCCCAAGCTTCGCCTGAAG 811
                      ***** *************  *************************  ****** ** * 

consensus_2662#0      AAGATAAAAACTCTCTGGTGGGATAACATGAATGAATGTCCGTATATGAGACCATGGTTT 883
consensus_2662#1      AAGATGAAAACCCTGTGGTGGGATGACATGAGTGAATGTCCATATTTGAGACCATGGCTA 871
                      ***** ***** ** ********* ****** ********* *** *********** * 

consensus_2662#0      GTGGTTTGTGGTGACATGCTTCTCATTGTTGACCACTACATAAGTTTTTCATTTGGAGCA 943
consensus_2662#1      GTGGTTTGCGATGGCATGCTTCTCATTGTTGACCACTACATAACTTTGTCATTTGGAGCA 931
                      ******** * ** ***************************** *** ************

consensus_2662#0      CCGGTCCTCTACAGGCCATACCGTCTGGACATGTCGACCAAGCCTGCAAAATGGGTGGAG 1003
consensus_2662#1      CCAGTCAACTACAGACCGTACCGCCTGGACATGTCAGCCAAGCCTGCAAAATGGGTGGAG 991
                      ** ***  ****** ** ***** ***********  ***********************

consensus_2662#0      GTAAAGAAGCTGGAGAACTGGGCACTCTTCATTGGGGGTGATGCAAGGAGCCCTCCATTT 1063
consensus_2662#1      GTAAAGAAGCTGGAGAACTGGGCACTCTTTATCGGGGGTGATGCGAGAAGCCCGCCGTTT 1051
                      ***************************** ** *********** ** ***** ** ***

consensus_2662#0      TCTTTCAAGAACCCGGAGCGCTGGGGAGGGAGGAGCAACTGCTTGTACTATGCTCACTAC 1123
consensus_2662#1      GCTTTCAAGAACCCGGAGCGCTGGGGAGGGAGGAGCAACTGCTTGTACTATGCTCACTAC 1111
                       ***********************************************************

consensus_2662#0      TCTCAGCCATTGAGCCTGCATGGGTTAGGTGATGATGCAGATGCTGTGTGGGATCCTAAC 1183
consensus_2662#1      TCCCAGCCATGGAGCCTTCATGGGTTGGGTGATGATGCAGATGCTGTGTGGGATCCTACC 1171
                      ** ******* ****** ******** ******************************* *

consensus_2662#0      ACTGATGACAACCTCGTGTTCAAAAGAAACTGGTACCGCCAGCTGCAGGCCTTGTGGGTG 1243
consensus_2662#1      ACTGATGATAACCTTGTGTTCAAAAGAAACTGGTACAGTCAGCTGCAGGCCTTCTGGGTG 1231
                      ******** ***** ********************* * ************** ******

consensus_2662#0      TACCCAAGCATGTTCTATTCAGCGGGAGACGGCCAGTGATTGCT----GCACAAGAGCTC 1299
consensus_2662#1      TATCCAAGCATGTTCTATTCAGACGGAGACGGCCAGTGATTGGCACACGCACGAGTGCCC 1291
                      ** *******************  ******************      **** ** ** *

consensus_2662#0      TGCTCTTATCATCTGATTCTGAGACTCTCTTCTGAATTCTGATGTAGGGCAGAGCATCTT 1359
consensus_2662#1      TGCTCTTATTAGCTTCTTCTAAAATTGCCCCC----TTGTGATGTAGAGCAGAGACTTGT 1347
                      ********* * **  **** * * *  *  *    ** ******** ******  *  *

consensus_2662#0      AATGCTTAGCTTAATAATACTTGCAGTCGTTTTGTAGCTCAGTTGTTAGCTGCATTCTCT 1419
consensus_2662#1      GCAACTTGGCCTAGAAATCTAGGAGATCCTCATGGTGGTC--TTTATGTCTAGTTTAACA 1405
                          *** ** **  ***    *   ** *  **  * **  **  *  **   **  * 

consensus_2662#0      AGTCTAATATTTTCGAGGTGCACTGGATGCTTTTGTACCTAAACTATTAGTAGCTGTTGC 1479
consensus_2662#1      CTTGCAGTCGTTTTGTAGTTCAGTTATTAGCTGCATTACCAT-CTGATAGTAG--GGTGT 1462
                        *  * *  *** *  ** ** *   *   *   *  * *  **  ******  * ** 

consensus_2662#0      TTTTATGCTGGAAGTCTGGATTCTGGAACTCGCTACCGTTGAGGATTTCCACTGGTGATG 1539
consensus_2662#1      GACTGCACTGGATGCAAGTGTAGTT-AACTAGTTGTTGCT-----TTTCCACTGGTGATG 1516
                         *   ***** *   *  *  *  **** * *   * *     ***************

consensus_2662#0      G-AGATAATGTTTCGTTTTACGAGTGTTTGAG------------CTTAGCTGCTATATTT 1586
consensus_2662#1      GTAGGTAATGTTTCGTTCTGTAAGGGTTTGGAACTTTTGTTCTTCTTCACAGCAATGGTT 1576
                      * ** ************ *   ** *****              ***  * ** **  **

consensus_2662#0      TGGAACATTAATATATATTCTTGTGTG-- 1613
consensus_2662#1      TGGAACACTAATGTA-ATGCTTGTGCACT 1604
                      ******* **** ** ** ******    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)