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Oryza sativa
cluster # 2676 cluster # 2676       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2676#0 length = 1989 sequences # 2  

consensusID : consensus_2676#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1989
fasta sequence
                              [GAGGGAGAGAGAGAGATCCCGAGCTCCCGACCCGAGCGACACGCTCGCGCTCCTTGCCAATCTTGGGCCTCCCGAGTTTTGCTGCCATTGCCGCTCGCTGCTGCTCTCGAGTGCGCGCGTGCGTGCGTGCGTGTTGCGCCGGGGGGAATGGGGATAGTGAGAGCCGCGGAGGATGTGGAGGGCGCGGTGGTGGCCGGAGCCGCGGGCGGCGGCGGCGGAGGCGGAGGCGGCGAGGTGACGGCGCCGCTGCTCCTCCGGCAGCACAAGCAGGGGCGGGGCGATGAGGAGAAGATCCAGAATGATGCGGGCGGCGATGGCGGGGGTCGGCGCGGAGGAGGAGGAGGAGGGTCCATGTCGATGCTGATGCTCTCCACCGCCGTCGCCGTGTGCGGCTCCTTCGAGTTCGGCACCTGCGTGGGTTATTCTGCACCCACTCAGTCAGGGATTGTGGATGAAGTTGGACTGTCCATTTCGCAGTTTGCACTATTCGGATCTGTACTGACGATTGGGGCAATGATTGGTGATGTCACTAGTGGTCGCTTAGCAGATTTTCTTGGACGTAAAATGACAATGCGGATATCAGCTACTATTTGCATTTTTGGATGGCTTTCTTTGCATTTGGCTAAGGGTGTTATCATGCTCTACTTTGGAAGGATATTGTTGGGCTTTAGTACTGGGATTCTTTCTTATGTGGTGCCTGTGTTCATCGCTGAAATAGCACCAAAGAATCTCAGGGGAGGCCTTGCAACTTCAAACCAGTTGCTGATCTGTTCTGGGAGTTCAGCTACATACATAATTGGCGCCCTGGTTGCATGGCGTAATCTTGTGTTAGTAGGTATAGTACCATGTGTTTTGCTATTAACAGGACTTCTCTTCATTCCAGAGTCACCAAGATGGCTGGCTAACGTTGGAAGGGAGAAAGAATTTCATGCCTCATTGCAAATGCTACGGGGAGAGGATGCTGACGTTTCTGAAGAGGCCGTCGAGATTAAAGAGTATATTGAATCACTCCATAGGTTCCCAAAGGCCAGGGTTCAAGATTTGTTTCTCAGAAAAAATATATACGCTGTCACTGTGGGTGTTGGCTTGATGATATTTCAGCAATTAGGAGGGATAAATGGTGTAGGCTTTTATGCAAGCTCTATCTTCACTTCTGCAGGTTTCTCTGGAAAACTTGGAACCATCTTGATTGGCATTATTCAGATTCCTATTACATTGTTCGGAGCCATTCTAATGGATAAGAGTGGAAGACGGGTTCTTCTAATGGTCTCGGCATCCGGAACATTTTTGGGCTGCTTTCTGACAGGAATATCCTTCTACCTAAAGGCACAAGGGCTATTCTCAGAATGGGTTCCTGAATTGGCTCTTACCGGTATACTGGTTTATATTGGAGCATACTCGATTGGAATGGGCCCTGTCCCTTGGGTTGTCATGTCTGAGATATTCTCGATTGACATGAAAGCAATCGGTGGAAGCTTGGTGACACTAGTTAGTTGGTTAGGTTCCTTCGCGATTTCTTACTCGTTCAGCTTCCTCATGGACTGGAGTTCTGCAGGGACCTTCTTCATGTTCTCCGCGGCGAGCTTGATCACCATCCTGTTCGTGGTGATGGTCGTGCCTGAAACCAAAGGGAGGACGCTCGAGGAGATTCAGGACTCGCTCATCGACTCCAGATCAAGATTGAGGGATCCATAGACCATAGAGATATGATCCACTTGCTCCACTCTTTCTACCTGAGCCGCCGTCAAATTCGACGCACCTCTCTCTCTCACTCTCTCTGTCTCTTTAGCCTCCTGATCTTTCTCTCTCCGGTTCTTGGCAGTTTTGCCGTAGTGTACTCAATACCTAGCTAGGCTAAGTCCCGGGCTACTACGCATGCAAGCTATGTATACCATGTCACTCTGAATTGTATTGAGCAATATATATATGGGACACACACACATATGTGTGTTCTGAGGCTTTACGCTGTTTTGTCGTGAAAAAAAAAAA]

[+] EMBL AK106658             [GAGGGAGAGAGAGAGATCCCGAGCTCCCGACCCGAGCGACACGCTCGCGCTCCTTGCCAATCTTGGGCCTCCCGAGTTTTGCTGCCATTGCCGCTCGCTGCTGCTCTCGAGTGCGCGCGTGCGTGCGTGCGTGTTGCGCCGGGGGGAATGGGGATAGTGAGAGCCGCGGAGGATGTGGAGGGCGCGGTGGTGGCCGGAGCCGCGGGCGGCGGCGGCGGAGGCGGAGGCGGCGAGGTGACGGCGCCGCTGCTCCTCCGGCAGCACAAGCAGGGGCGGGGCGATGAGGAGAAGATCCAGAATGATGCGGGCGGCGATGGCGGGGGTCGGCGCGGAGGAGGAGGAGGAGGGTCCATGTCGATGCTGATGCTCTCCACCGCCGTCGCCGTGTGCGGCTCCTTCGAGTTCGGCACCTGCGTGGGTTATTCTGCACCCACTCAGTCAGGGATTGTGGATGAAGTTGGACTGTCCATTTCGCAGTTTGCACTATTCGGATCTGTACTGACGATTGGGGCAATGATTGGTGATGTCACTAGTGGTCGCTTAGCAGATTTTCTTGGACGTAAAATGACAATGCGGATATCAGCTACTATTTGCATTTTTGGATGGCTTTCTTTGCATTTGGCTAAGGGTGTTATCATGCTCTACTTTGGAAGGATATTGTTGGGCTTTAGTACTGGGATTCTTTCTTATGTGGTGCCTGTGTTCATCGCTGAAATAGCACCAAAGAATCTCAGGGGAGGCCTTGCAACTTCAAACCAGTTGCTGATCTGTTCTGGGAGTTCAGCTACATACATAATTGGCGCCCTGGTTGCATGGCGTAATCTTGTGTTAGTAGGTATAGTACCATGTGTTTTGCTATTAACAGGACTTCTCTTCATTCCAGAGTCACCAAGATGGCTGGCTAACGTTGGAAGGGAGAAAGAATTTCATGCCTCATTGCAAATGCTACGGGGAGAGGATGCTGACGTTTCTGAAGAGGCCGTCGAGATTAAAGAGTATATTGAATCACTCCATAGGTTCCCAAAGGCCAGGGTTCAAGATTTGTTTCTCAGAAAAAATATATACGCTGTCACTGTGGGTGTTGGCTTGATGATATTTCAGCAATTAGGAGGGATAAATGGTGTAGGCTTTTATGCAAGCTCTATCTTCACTTCTGCAGGTTTCTCTGGAAAACTTGGAACCATCTTGATTGGCATTATTCAGATTCCTATTACATTGTTCGGAGCCATTCTAATGGATAAGAGTGGAAGACGGGTTCTTCTAATGGTCTCGGCATCCGGAACATTTTTGGGCTGCTTTCTGACAGGAATATCCTTCTACCTAAAGGCACAAGGGCTATTCTCAGAATGGGTTCCTGAATTGGCTCTTACCGGTATACTGGTTTATATTGGAGCATACTCGATTGGAATGGGCCCTGTCCCTTGGGTTGTCATGTCTGAGATATTCTCGATTGACATGAAAGCAATCGGTGGAAGCTTGGTGACACTAGTTAGTTGGTTAGGTTCCTTCGCGATTTCTTACTCGTTCAGCTTCCTCATGGACTGGAGTTCTGCAGGGACCTTCTTCATGTTCTCCGCGGCGAGCTTGATCACCATCCTGTTCGTGGTGATGGTCGTGCCTGAAACCAAAGGGAGGACGCTCGAGGAGATTCAGGACTCGCTCATCGACTCCAGATCAAGATTGAGGGATCCATAGACCATAGAGATATGATCCACTTGCTCCACTCTTTCTACCTGAGCCGCCGTCAAATTCGACGCACCTCTCTCTCTCACTCTCTCTGTCTCTTTAGCCTCCTGATCTTTCTCTCTCCGGTTCTTGGCAGTTTTGCCGTAGTGTACTCAATACCTAGCTAGGCTAAGTCCCGGGCTACTACGCATGCAAGCTATGTATACCATGTCACTCTGAATTGTATTGAGCAATATATATATGGGACACACACACATATGTGTGTTCTGAGGCTTTACGCTGTTTTGTCGTGAAAAAAAAAAA]
[+] EMBL CB680388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGGTGCTATCATGCTCTACTTTGGAAGGATATTGTTGGGCTTTAGTACTGGGATTCTTTCTTATGTGGTGCCTGTGTTCATCGCTGAAATAGCACCAAAGAATCTCAGGGGAGGCCTTGCAACTTCAAACCAGTTGCTGATCTGTTCTGGGAGTTCAGCTACATACATAATTGGCGCCCTGGTTGCATGGCGTAATCTTGTGTTAGTAGGTATAGTACCATGTGTTTTGCTATTAACAGGACTTCTCTTCATTCCAGAGTCACCAAGATGGCTGGCTAACGTTGGAAGGGAGAAAGAATTTCATGCCTCATTGCAAATGCTACGGGGAGAGGATGCTGACGTTTCTGAAGAGGCCGTCGAGATTAAAGAGTATATTGAATCACTCCATAGGTTCCCAAAGGCCAGGGTTCAAGATTTGTTTCTCAGAAAAAATATATACGCTGTCACTGTGGGTGTTGGCTTGATGATATTTCAGCAATTAGGAGGGATAAATGGTGTAGGCTTTTATGCAAGCTCTATCTTCACTTCTGCAGGTTTCTCTGGAAAACTTGGAACCATCTTGATTGGCATTATTCAGATTCCTATTACATTGTTCGGAGCCATTCTAATGGATAAGAGTGGAAGACGGGTTCTTCTAATGGTCTCGGCATCCGGAACATTTTTGGGCTGCTTTCTGACAGGAATATCCTTCTACCTAAAGGCACAAGGGCTATTCTCAGAATGAGTTCCTGAATTGGCTCTTACCGGTATACTGGTTTATATTGGAGCATACTCGATTGGAATGGGCCCTGTCCCTTGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_2676#0 GAGGGAGAGAGAGAGATCCCGAGCTCCCGACCCGAGCGACACGCTCGCGCTCCTTGCCAA TCTTGGGCCTCCCGAGTTTTGCTGCCATTGCCGCTCGCTGCTGCTCTCGAGTGCGCGCGT GCGTGCGTGCGTGTTGCGCCGGGGGGAATGGGGATAGTGAGAGCCGCGGAGGATGTGGAG GGCGCGGTGGTGGCCGGAGCCGCGGGCGGCGGCGGCGGAGGCGGAGGCGGCGAGGTGACG GCGCCGCTGCTCCTCCGGCAGCACAAGCAGGGGCGGGGCGATGAGGAGAAGATCCAGAAT GATGCGGGCGGCGATGGCGGGGGTCGGCGCGGAGGAGGAGGAGGAGGGTCCATGTCGATG CTGATGCTCTCCACCGCCGTCGCCGTGTGCGGCTCCTTCGAGTTCGGCACCTGCGTGGGT TATTCTGCACCCACTCAGTCAGGGATTGTGGATGAAGTTGGACTGTCCATTTCGCAGTTT GCACTATTCGGATCTGTACTGACGATTGGGGCAATGATTGGTGATGTCACTAGTGGTCGC TTAGCAGATTTTCTTGGACGTAAAATGACAATGCGGATATCAGCTACTATTTGCATTTTT GGATGGCTTTCTTTGCATTTGGCTAAGGGTGTTATCATGCTCTACTTTGGAAGGATATTG TTGGGCTTTAGTACTGGGATTCTTTCTTATGTGGTGCCTGTGTTCATCGCTGAAATAGCA CCAAAGAATCTCAGGGGAGGCCTTGCAACTTCAAACCAGTTGCTGATCTGTTCTGGGAGT TCAGCTACATACATAATTGGCGCCCTGGTTGCATGGCGTAATCTTGTGTTAGTAGGTATA GTACCATGTGTTTTGCTATTAACAGGACTTCTCTTCATTCCAGAGTCACCAAGATGGCTG GCTAACGTTGGAAGGGAGAAAGAATTTCATGCCTCATTGCAAATGCTACGGGGAGAGGAT GCTGACGTTTCTGAAGAGGCCGTCGAGATTAAAGAGTATATTGAATCACTCCATAGGTTC CCAAAGGCCAGGGTTCAAGATTTGTTTCTCAGAAAAAATATATACGCTGTCACTGTGGGT GTTGGCTTGATGATATTTCAGCAATTAGGAGGGATAAATGGTGTAGGCTTTTATGCAAGC TCTATCTTCACTTCTGCAGGTTTCTCTGGAAAACTTGGAACCATCTTGATTGGCATTATT CAGATTCCTATTACATTGTTCGGAGCCATTCTAATGGATAAGAGTGGAAGACGGGTTCTT CTAATGGTCTCGGCATCCGGAACATTTTTGGGCTGCTTTCTGACAGGAATATCCTTCTAC CTAAAGGCACAAGGGCTATTCTCAGAATGGGTTCCTGAATTGGCTCTTACCGGTATACTG GTTTATATTGGAGCATACTCGATTGGAATGGGCCCTGTCCCTTGGGTTGTCATGTCTGAG ATATTCTCGATTGACATGAAAGCAATCGGTGGAAGCTTGGTGACACTAGTTAGTTGGTTA GGTTCCTTCGCGATTTCTTACTCGTTCAGCTTCCTCATGGACTGGAGTTCTGCAGGGACC TTCTTCATGTTCTCCGCGGCGAGCTTGATCACCATCCTGTTCGTGGTGATGGTCGTGCCT GAAACCAAAGGGAGGACGCTCGAGGAGATTCAGGACTCGCTCATCGACTCCAGATCAAGA TTGAGGGATCCATAGACCATAGAGATATGATCCACTTGCTCCACTCTTTCTACCTGAGCC GCCGTCAAATTCGACGCACCTCTCTCTCTCACTCTCTCTGTCTCTTTAGCCTCCTGATCT TTCTCTCTCCGGTTCTTGGCAGTTTTGCCGTAGTGTACTCAATACCTAGCTAGGCTAAGT CCCGGGCTACTACGCATGCAAGCTATGTATACCATGTCACTCTGAATTGTATTGAGCAAT ATATATATGGGACACACACACATATGTGTGTTCTGAGGCTTTACGCTGTTTTGTCGTGAA AAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)