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Oryza sativa
cluster # 2681 cluster # 2681       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2681#0 length = 1329 sequences # 2  

consensusID : consensus_2681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1329
fasta sequence
                              [CTTTTTCTTCTGCCCATAATAAAGGTTGGGCATTTTGCTAGTGTTGTGTATATATGAACAAGAACGCGCCCAGAGATCCCTCCATTAATTATCCCCCCTCTCTGCTCCGTCAGTCGGTTTGGCGGTCGATCGATCGGTGACGCCGTGACGGTGTATGTAGGCCGACTGGTCCACGTACGTGCGGTGCGATTGCTGTTGTGATCGAGGAACCGCGAAATGGGTCGCGGGGGCGACGTGGACGGCGCGGCGGGCGCGCTGCGGCGGTTCGTGCGGGAAGCGGGAGGGTGCGCGGTGGTGGACGGCGGGCTGGCCACGGAGCTGGAGGCGCACGGCGCGGACCTGCATGACGAGCTCTGGAGCGCCAGCTGCCTCGTCTCCGCCCCTCACCTCATCCGCAAGGTGCATTTGGACTACCTCGACGCCGGCGCCAACATCATAACCTCGGCGTCTTACCAGGCGACGATACAGGGGTTCCAGGCGAGAGGCCTGTCGCGTGAGCGGAGCGAGGCGCTGCTTCGTCGGAGCGTCCACATCGCGCAGGAGGCGCGCGCCATCTTCGCCGAGGGCTGGTCCAAGGGCCCGTACGCCAACCACCGCTCCTCGCCGCGCCGGCCCGTGCTCGTGGCCGCCTCCATCGGCAGCTACGGCGCCTATCTCGCCGACGGCTCCGAGTACACCGGCGACTACGGCATATCGGTGACCAAGGAGACGCTCAAGAGCTTCCACCGGAGGAGGCTGCAGGTGCTCGCCGACGCGGGGCCCGATCTCATCGCGTTCGAGACGATCCCGAACAAGCTGGAGGCGCAGGCGAGCGGCGACCCCATCACGGAGTGCGCCGCCGTGGCCGACGCCTGCGCGAGGGTCGGCGCCGTAGGGGTGAACTGCACCGCCCCCAGGCTGGTGCACGGCCTGATCCTCTCCATCAGGAAGGTGACGAGCAAGCCGGTCGTCGTGTACCCCAACAGCGGGGAGACCTACGTGGCCGAGACCAAAGAATGGGTGGAGTCGGAGGGCGGCGCGTCGGAGACGGACTTCGTGTCGTGCGTCGGCAAGTGGAGGCAGGCGGGCGCCGCCCTCGTCGGGGGTTGCTGCAGGACGAGCCCGGCCACGGTGAGGGCCATCTCGTGGGCGCTGCGTGAATCGGATGACGCCGTGGGTGGTGACGGCGATCGCGACGATTTCCCTGCAGTGGCCGTGCTCTAGTTGTTCCTGCCTTGTCGTCGATCATCGAGTCTCGTGGTTGTCTGGTTGAGCGCGCAGTTTTGTGTGTGTATCCATGCTTCCAATCAATGGAAAATGGAAAT-AAAATGGTTCGGTTCGTGCAGTTTA]

[+] EMBL AK073362             [CTTTTTCTTCTGCCCATAATAAAGGTTGGGCATTTTGCTAGTGTTGTGTATATATGAACAAGAACGCGCCCAGAGATCCCTCCATTAATTATCCCCCCTCTCTGCTCCGTCAGTCGGTTTGGCGGTCGATCGATCGGTGACGCCGTGACGGTGTATGTAGGCCGACTGGTCCACGTACGTGCGGTGCGATTGCTGTTGTGATCGAGGAACCGCGAAATGGGTCGCGGGGGCGACGTGGACGGCGCGGCGGGCGCGCTGCGGCGGTTCGTGCGGGAAGCGGGAGGGTGCGCGGTGGTGGACGGCGGGCTGGCCACGGAGCTGGAGGCGCACGGCGCGGACCTGCATGACGAGCTCTGGAGCGCCAGCTGCCTCGTCTCCGCCCCTCACCTCATCCGCAAGGTGCATTTGGACTACCTCGACGCCGGCGCCAACATCATAACCTCGGCGTCTTACCAGGCGACGATACAGGGGTTCCAGGCGAGAGGCCTGTCGCGTGAGCGGAGCGAGGCGCTGCTTCGTCGGAGCGTCCACATCGCGCAGGAGGCGCGCGCCATCTTCGCCGAGGGCTGGTCCAAGGGCCCGTACGCCAACCACCGCTCCTCGCCGCGCCGGCCCGTGCTCGTGGCCGCCTCCATCGGCAGCTACGGCGCCTATCTCGCCGACGGCTCCGAGTACACCGGCGACTACGGCATATCGGTGACCAAGGAGACGCTCAAGAGCTTCCACCGGAGGAGGCTGCAGGTGCTCGCCGACGCGGGGCCCGATCTCATCGCGTTCGAGACGATCCCGAACAAGCTGGAGGCGCAGGCGAGCGGCGACCCCATCACGGAGTGCGCCGCCGTGGCCGACGCCTGCGCGAGGGTCGGCGCCGTAGGGGTGAACTGCACCGCCCCCAGGCTGGTGCACGGCCTGATCCTCTCCATCAGGAAGGTGACGAGCAAGCCGGTCGTCGTGTACCCCAACAGCGGGGAGACCTACGTGGCCGAGACCAAAGAATGGGTGGAGTCGGAGGGCGGCGCGTCGGAGACGGACTTCGTGTCGTGCGTCGGCAAGTGGAGGCAGGCGGGCGCCGCCCTCGTCGGGGGTTGCTGCAGGACGAGCCCGGCCACGGTGAGGGCCATCTCGTGGGCGCTGCGTGAATCGGATGACGCCGTGGGTGGTGACGGCGATCGCGACGATTTCCCTGCAGTGGCCGTGCTCTAGTTGTTCCTGCCTTGTCGTCGATCATCGAGTCTCGTGGTTGTCTGGTTGAGCGCGCAGTTTTGTGTGTGTATCCATGCTTCCAATCAATGGAAAATGGAAAT AAAATGGTTCGGTTCGTGCAGTTTA]
[+] EMBL AK104962             [                                                                                            CCCCCCTCTCTGCTCCGTCAGTCGGTTTGGCGGTCGATCGATCGGTGACGCCGTGACGGTGTATGTAGGCCGACTGGTCCACGTACGTGCGGTGCGATTGCTGTTGTGATCGAGGAACCGCGAAATGGGTCGCGGGGGCGACGTGGACGGCGCGGCGGGCGCGCTGCGGCGGTTCGTGCGGGAAGCGGGAGGGTGCGCGGTGGTGGACGGCGGGCTGGCCACGGAGCTGGAGGCGCACGGCGCGGACCTGCATGACGAGCTCTGGAGCGCCAGCTGCCTCGTCTCCGCCCCTCACCTCATCCGCAAGGTGCATTTGGACTACCTCGACGCCGGCGCCAACATCATAACCTCGGCGTCTTACCAGGCGACGATACAGGGGTTCCAGGCGAGAGGCCTGTCGCGTGAGCGGAGCGAGGCGCTGCTTCGTCGGAGCGTCCACATCGCGCAGGAGGCGCGCGCCATCTTCGCCGAGGGCTGGTCCAAGGGCCCGTACGCCAACCACCGCTCCTCGCCGCGCCGGCCCGTGCTCGTGGCCGCCTCCATCGGCAGCTACGGCGCCTATCTCGCCGACGGCTCCGAGTACACCGGCGACTACGGCATATCGGTGACCAAGGAGACGCTCAAGAGCTTCCACCGGAGGAGGCTGCAGGTGCTCGCCGACGCGGGGCCCGATCTCATCGCGTTCGAGACGATCCCGAACAAGCTGGAGGCGCAGGCGAGCGGCGACCCCATCACGGAGTGCGCCGCCGTGGCCGACGCCTGCGCGAGGGTCGGCGCCGTCGGGGTGAACTGCACCGCCCCCAGGCTGGTGCACGGCCTGATCCTCTCCATCAGGAAGGTGACGAGCAAGCCGGTCGTCGTGTACCCCAACAGCGGGGAGACCTACGTGGCCGAGACCAAAGAATGGGTGGAGTCGGAGGGCGGCGCGTCGGAGACGGACTTCGTGTCGTGCGTCGGCAAGTGGAGGCAGGCGGGCGCCGCCCTCGTCGGGGGTTGCTGCAGGACGAGCCCGGCCACGGTGAGGGCCATCTCGTGGGCGCTGCGTGAATCGGATGACGCCGTGGGTGGTGACGGCGATCGCGACGATTTCCCTGCAGTGGCCGTGCTCTAGTTGTTCCTGCCTTGTCGTCGATCATCGAGTCTCGTGGTTGTCTGGTTGAGCGCGCAGTTTTGTGTGTGTATCCATGCTTCCAATCAATGGAAAATGGAAATAAAAATGGTTCGGT            ]


>consensus_2681#0 CTTTTTCTTCTGCCCATAATAAAGGTTGGGCATTTTGCTAGTGTTGTGTATATATGAACA AGAACGCGCCCAGAGATCCCTCCATTAATTATCCCCCCTCTCTGCTCCGTCAGTCGGTTT GGCGGTCGATCGATCGGTGACGCCGTGACGGTGTATGTAGGCCGACTGGTCCACGTACGT GCGGTGCGATTGCTGTTGTGATCGAGGAACCGCGAAATGGGTCGCGGGGGCGACGTGGAC GGCGCGGCGGGCGCGCTGCGGCGGTTCGTGCGGGAAGCGGGAGGGTGCGCGGTGGTGGAC GGCGGGCTGGCCACGGAGCTGGAGGCGCACGGCGCGGACCTGCATGACGAGCTCTGGAGC GCCAGCTGCCTCGTCTCCGCCCCTCACCTCATCCGCAAGGTGCATTTGGACTACCTCGAC GCCGGCGCCAACATCATAACCTCGGCGTCTTACCAGGCGACGATACAGGGGTTCCAGGCG AGAGGCCTGTCGCGTGAGCGGAGCGAGGCGCTGCTTCGTCGGAGCGTCCACATCGCGCAG GAGGCGCGCGCCATCTTCGCCGAGGGCTGGTCCAAGGGCCCGTACGCCAACCACCGCTCC TCGCCGCGCCGGCCCGTGCTCGTGGCCGCCTCCATCGGCAGCTACGGCGCCTATCTCGCC GACGGCTCCGAGTACACCGGCGACTACGGCATATCGGTGACCAAGGAGACGCTCAAGAGC TTCCACCGGAGGAGGCTGCAGGTGCTCGCCGACGCGGGGCCCGATCTCATCGCGTTCGAG ACGATCCCGAACAAGCTGGAGGCGCAGGCGAGCGGCGACCCCATCACGGAGTGCGCCGCC GTGGCCGACGCCTGCGCGAGGGTCGGCGCCGTAGGGGTGAACTGCACCGCCCCCAGGCTG GTGCACGGCCTGATCCTCTCCATCAGGAAGGTGACGAGCAAGCCGGTCGTCGTGTACCCC AACAGCGGGGAGACCTACGTGGCCGAGACCAAAGAATGGGTGGAGTCGGAGGGCGGCGCG TCGGAGACGGACTTCGTGTCGTGCGTCGGCAAGTGGAGGCAGGCGGGCGCCGCCCTCGTC GGGGGTTGCTGCAGGACGAGCCCGGCCACGGTGAGGGCCATCTCGTGGGCGCTGCGTGAA TCGGATGACGCCGTGGGTGGTGACGGCGATCGCGACGATTTCCCTGCAGTGGCCGTGCTC TAGTTGTTCCTGCCTTGTCGTCGATCATCGAGTCTCGTGGTTGTCTGGTTGAGCGCGCAG TTTTGTGTGTGTATCCATGCTTCCAATCAATGGAAAATGGAAATAAAATGGTTCGGTTCG TGCAGTTTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)