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Oryza sativa
cluster # 2704 cluster # 2704       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2704#0 length = 1090 sequences # 2  

consensusID : consensus_2704#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1090
fasta sequence
                              [CCGTGGGCGTGGCGGATCGACCAAATCAACTTCTCCCCCGCGTCAGAACTGCAGCGTCCACATGCTGATCATGATCATCGATGGCGCGCCGGCGGCGTCGTCGTGGATCTGCACGAACGTCAGCTCACCGTCGCTCACGTTCACGCACCGGTACTTGGCTTGGGGGGTTCGCATCGCTGGAGTACGCGGTAGCTTGCATCCCTCAGGGAGCGGCACGAAGCGCATGTCAGGCTGGAGCTCGGCCACCAAACGGATCCGGTGTTTGCCATCCGCTGCAGTCCTGGGGATCATGCCGACGTTCCCGGCGCAGAGGAGCCGGTAGTCGTCGGAGCAGGGCGGGTAGAGGAAGGCCGTGCGGAGCCAAGCGTCGCAGAGGATGTAGCCGCCATCGTTGGCGCAGCTCGGTGCAGGGTCGAAGCCGAGCGCGACGCCGCCGGGGCCGAAATCGTGGGCGCTGCGGAGCAGGAGTCGGCCGGCGGAGACGCGGAGTCGACGGAGACGACAAGGGGTGATCGTCGCGGTCGAGGCAGAAGTCCTGAGGCGCGGGGGAGACAGAGATCTAAAGGAGGGAGGCGCCCGCCGCCCGGCGGATCGCGCCACTCGAAGGCGGGCGAGGTGGTCGCCGGCCTAGAAGTTGAAGTCGTCGTCGGAAGAGGACACGCTCGGGACGCATGCCAGGATCACCCACGTGGTCGCCGGCGGCGGCGGCGGCAAGGACGAGGAGAGAAACGTACCCACAGGGTCCTCGCGGTCACCGATCGTACATAGAGGATCAAACGAGTTGGCATCGCCTTGCTTGAAATTGATCTCCGGAACAGCGAGGGTGGCCATGCTCGTTCACCGCCGGCAACGCGTGTGCATATTAGTCCATGGCGGCGGCGGCGGCGGCGGCGGTGGAGCGGGTGGCGAACTGGCGACGTGCAGTGCGGGCGAGGCGAATTGGAAATGGTGCGCTGCGCTCCCATCTCAATTTGCCGGCTTATGTAGAGGGAGAAAAGGAGGAGCTACTAGTCGTGTACTCGTGTCTTGTGCTTGTCTTGCAGGACAAGCTGGTTAATTAGTTAGTTAGGCTTATCCAATTCTAATCTCT]

[+] EMBL AK111472             [CCGTGGGCGTGGCGGATCGACCAAATCAACTTCTCCCCCGCGTCAGAACTGCAGCGTCCACATGCTGATCATGATCATCGATGGCGCGCCGGCGGCGTCGTCGTGGATCTGCACGAACGTCAGCTCACCGTCGCTCACGTTCACGCACCGGTACTTGGCTTGGGGGGTTCGCATCGCTGGAGTACGCGGTAGCTTGCATCCCTCAGGGAGCGGCACGAAGCGCATGTCAGGCTGGAGCTCGGCCACCAAACGGATCCGGTGTTTGCCATCCGCTGCAGTCCTGGGGATCATGCCGACGTTCCCGGCGCAGAGGAGCCGGTAGTCGTCGGAGCAGGGCGGGTAGAGGAAGGCCGTGCGGAGCCAAGCGTCGCAGAGGATGTAGCCGCCATCGTTGGCGCAGCTCGGTGCAGGGTCGAAGCCGAGCGCGACGCCGCCGGGGCCGAAATCGTGGGCGCTGCGGAGCAGGAGTCGGCCGGCGGAGACGCGGAGTCGACGGAGACGACAAGGGGTGATCGTCGCGGTCGAGGCAGAAGTCCTGAGGCGCGGGGGAGACAGAGATCTAAAGGAGGGAGGCGCCCGCCGCCCGGCGGATCGCGCCACTCGAAGGCGGGCGAGGTGGTCGCCGGCCTAGAAGTTGAAGTCGTCGTCGGAAGAGGACACGCTCGGGACGCATGCCAGGATCACCCACGTGGTCGCCGGCGGCGGCGGCGGCAAGGACGAGGAGAGAAACGTACCCACAGGGTCCTCGCGGTCACCGATCGTACATAGAGGATCAAACGAGTTGGCATCGCCTTGCTTGAAATTGATCTCCGGAACAGCGAGGGTGGCCATGCTCGTTCACCGCCGGCAACGCGTGTGCATATTAGTCCATGGCGGCGGCGGCGGCGGCGGCGGTGGAGCGGGTGGCGAACTGGCGACGTGCAGTGCGGGCGAGGCGAATTGGAAATGGTGCGCTGCGCTCCCATCTCAATTTGCCGGCTTATGTAGAGGGAGAAAAGGAGGAGCTACTAGTCGTGTACTCGTGTCTTGTGCTTGTCTTGCAGGACAAGCTGGTTAATTAGTTAGTTAGGCTTATCCAATTCTAATCTCT]
[+] EMBL AK073682             [CCGTGGGCGTGGCGGATCGACCAAATCAACTTCTCCCCCGCGTCAGAACTGCAGCGTCCACATGCTGATCATGATCATCGATGGCGCGCCGGCGGCGTCGTCGTGGATCTGCACGAACGTCAGCTCACCGTCGCTCACGTTCACGCACCGGTACTTGGCTTGGGGGGTTCGCATCGCTGGAGTACGCGGTAGCTTGCATCCCTCAGGGAGCGGCACGAAGCGCATGTCAGGCTGGAGCTCGGCCACCAAACGGATCCGGTGTTTGCCATCCGCTGCAGTCCTGGGGATCATGCCGACGTTCCCGGCGCAGAGGAGCCGGTAGTCGTCGGAGCAGGGCGGGTAGAGGAAGGCCGTGCGGAGCCAAGCGTCGCAGAGGATGTAGCCGCCATCGTTGGCGCAGCTCGGTGCAGGGTCGAAGCCGAGCGCGACGCCGCCGGGGCCGAAATCGTGGGCGCTGCGGAGCAGGAGTCGGCCGGCGGAGACGCGGAGTCGACGGAGACGACAAGGGGTGATCGTCGCGGTCGAGGCAGAAGTCCTGAGGCGCGGGGGAGACAGAGATCTAAAGGAGGGAGGCGCCCGCCGCCCGGCGGATCGCGCCACTCGAAGGCGGGCGAGGTGGTCGCCGGCCTAGAAGTTGAAGTCGTCGTCGGAAGAGGACACGCTCGGGACGCATGCCAGGATCACCCACGTGGTCGCCGGCGGCGGCGGCGGCAAGGACGAGGAGAGAAACGTACCCACAGGGTCCTCGCGGTCACCGATCGTACATAGAGGATCAAACGAGTTGGCATCGCCTTGCTTGAAATTGATCTCCGGAACAGCGAGGGTGGCCATGCTCGTTCACCGCCGGCAACGCGTGTGCATATTAGTCCATGGCGGCGGCGGCGGCGGCGGCGGTGGAGCGGGTGGCGAACTGGCGACGTGCAGTGCGGGCGAGGCGAATTGGAAATGGTGCGCTGCGCTCCCATCTCAATTTGCCGGCTTATGTAGAGGGAGAAAAGGAGGAGCTACTAGTCGTGTACTCGTGTCTTGTGCTTGTCTTGCAGGACAAGCTGGGTAATTAGTTAGTTAGGCTTATCCAATT         ]


>consensus_2704#0 CCGTGGGCGTGGCGGATCGACCAAATCAACTTCTCCCCCGCGTCAGAACTGCAGCGTCCA CATGCTGATCATGATCATCGATGGCGCGCCGGCGGCGTCGTCGTGGATCTGCACGAACGT CAGCTCACCGTCGCTCACGTTCACGCACCGGTACTTGGCTTGGGGGGTTCGCATCGCTGG AGTACGCGGTAGCTTGCATCCCTCAGGGAGCGGCACGAAGCGCATGTCAGGCTGGAGCTC GGCCACCAAACGGATCCGGTGTTTGCCATCCGCTGCAGTCCTGGGGATCATGCCGACGTT CCCGGCGCAGAGGAGCCGGTAGTCGTCGGAGCAGGGCGGGTAGAGGAAGGCCGTGCGGAG CCAAGCGTCGCAGAGGATGTAGCCGCCATCGTTGGCGCAGCTCGGTGCAGGGTCGAAGCC GAGCGCGACGCCGCCGGGGCCGAAATCGTGGGCGCTGCGGAGCAGGAGTCGGCCGGCGGA GACGCGGAGTCGACGGAGACGACAAGGGGTGATCGTCGCGGTCGAGGCAGAAGTCCTGAG GCGCGGGGGAGACAGAGATCTAAAGGAGGGAGGCGCCCGCCGCCCGGCGGATCGCGCCAC TCGAAGGCGGGCGAGGTGGTCGCCGGCCTAGAAGTTGAAGTCGTCGTCGGAAGAGGACAC GCTCGGGACGCATGCCAGGATCACCCACGTGGTCGCCGGCGGCGGCGGCGGCAAGGACGA GGAGAGAAACGTACCCACAGGGTCCTCGCGGTCACCGATCGTACATAGAGGATCAAACGA GTTGGCATCGCCTTGCTTGAAATTGATCTCCGGAACAGCGAGGGTGGCCATGCTCGTTCA CCGCCGGCAACGCGTGTGCATATTAGTCCATGGCGGCGGCGGCGGCGGCGGCGGTGGAGC GGGTGGCGAACTGGCGACGTGCAGTGCGGGCGAGGCGAATTGGAAATGGTGCGCTGCGCT CCCATCTCAATTTGCCGGCTTATGTAGAGGGAGAAAAGGAGGAGCTACTAGTCGTGTACT CGTGTCTTGTGCTTGTCTTGCAGGACAAGCTGGTTAATTAGTTAGTTAGGCTTATCCAAT TCTAATCTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)