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Oryza sativa
cluster # 2707 cluster # 2707       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2707#0 length = 1503 sequences # 2  

consensusID : consensus_2707#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1503
fasta sequence
                              [CAATCGCCGCCGCCTGTCGCCGCCGCCGCCGCCGCCTCCATATTCTAGCTCTCGGTGATCTCTGATGGAGCCCGAAGGCGGCGTCAGGCTGCCAACCCTAGATCGCGTCAGGCGCGGCGTCAGAAGTAGCTGTGATACCGAGAGCTGGGAATGCTTTCAATGCGGTTCGATAAACCTCCCTGTTGAGAAACTACTGTTTGATCTACCAGCATTCCATTGTCGTGGATGCGAAGCTCCGTTTCTTGGTGAAATGAACTTCTGCTATGACCTCGTCAAGGCAAACAAGCGTTCTCTGATTGGTGGGCTCGACAATATCAAGAATCAATACGATAATCCTGAATGTATCGCCTATTCTATAGCCTCTTGCCTTGAGATAGCAGACAGGATTAAGACGGTTCTTCAGGGAAAAAATCCCGACTCCGTAAAAGAGATAGACCCAACTGCCATTGTTGACATGTTTGATGGTAAGTGCTTGGCCAACTGTTCTGATGGCACATCGGGAATCGGAAAACTTGTTACAATGGCGCTTGCTGTCCAAACTGATGGCATACAATCTGCCGATCATTCAAGGCTTTACACTGCTGTAGCAGTGGAAACAATTGATAAGTATGACTTTGAAGGGATATGTGCCACACTTGCTGATGGCATTCCGCTTGTTGGTGCGTTTTACTGCGGCAGCAGATTGGAAAAGCTTGAGTATTGCCAAATTTACAGAGTGCCCAAACTATCCAAATTCCTGGATAGAAATCTGATTCCTACTGGCCATGCTGCTGTTATCATTGGGGCTGGAATGCGCTGCGGGATACAATATTTGTATTTTCTAAATTCGTGGGGTAACTTCTTTTGCCCACGCTATGACAAAGATGGTAATCTTGTGAAAGCTGGAGTTGGAAAGTTGAGGTTTTATGATTTGCTCTGCAATCCGATTATGTTCATAACAGATTCTGCCAAGCGTGTTGGGTTGAATAGGCAGCTACTGCCTATGGGCACTGGGAAGCTGTCAGATCACAACAAGAGCATGCTGATGGGCCGAAAACAAACTGATGTTATACCTGAAGACCTATCTATTGGCGTAACCTCCGAGTTTGTTGGGAATCAACCACAAATTTCTTCAAAAAGAAAAATGGCTAATGCCACTTTGGATGGTGATGGTCAAACTCAAAAGAGAAACAAGTGTAGAACTTTCGGCCGAAGTTCTGTCGATCTCAATGAAGCCAACAACAAACGGAATGCAAAGGAAGATGAGATGTGAGGTCATGGGGATGAAGAACCCTGCAGACATACTTTTGCTTTGTGAAAAAGGGCCTGATGTTTTTTGCTCTGAGAGTTGGTAGGGTTTGTGAGCCACCTCACCAAGCATCAATGATGCATATTTTTCATTATGCTACACTTGGATGTCTCAATTTAATCTACTGAGACTCTTTTTCGTTGATGATCACTGGCTCACTGCTCATGTAAATCCTGGAGAGTATTTATTGTTGAAACGAAGACATGATCTTCTGT]

[+] EMBL AK073721             [CAATCGCCGCCGCCTGTCGCCGCCGCCGCCGCCGCCTCCATATTCTAGCTCTCGGTGATCTCTGATGGAGCCCGAAGGCGGCGTCAGGCTGCCAACCCTAGATCGCGTCAGGCGCGGCGTCAGAAGTAGCTGTGATACCGAGAGCTGGGAATGCTTTCAATGCGGTTCGATAAACCTCCCTGTTGAGAAACTACTGTTTGATCTACCAGCATTCCATTGTCGTGGATGCGAAGCTCCGTTTCTTGGTGAAATGAACTTCTGCTATGACCTCGTCAAGGCAAACAAGCGTTCTCTGATTGGTGGGCTCGACAATATCAAGAATCAATACGATAATCCTGAATGTATCGCCTATTCTATAGCCTCTTGCCTTGAGATAGCAGACAGGATTAAGACGGTTCTTCAGGGAAAAAATCCCGACTCCGTAAAAGAGATAGACCCAACTGCCATTGTTGACATGTTTGATGGTAAGTGCTTGGCCAACTGTTCTGATGGCACATCGGGAATCGGAAAACTTGTTACAATGGCGCTTGCTGTCCAAACTGATGGCATACAATCTGCCGATCATTCAAGGCTTTACACTGCTGTAGCAGTGGAAACAATTGATAAGTATGACTTTGAAGGGATATGTGCCACACTTGCTGATGGCATTCCGCTTGTTGGTGCGTTTTACTGCGGCAGCAGATTGGAAAAGCTTGAGTATTGCCAAATTTACAGAGTGCCCAAACTATCCAAATTCCTGGATAGAAATCTGATTCCTACTGGCCATGCTGCTGTTATCATTGGGGCTGGAATGCGCTGCGGGATACAATATTTGTATTTTCTAAATTCGTGGGGTAACTTCTTTTGCCCACGCTATGACAAAGATGGTAATCTTGTGAAAGCTGGAGTTGGAAAGTTGAGGTTTTATGATTTGCTCTGCAATCCGATTATGTTCATAACAGATTCTGCCAAGCGTGTTGGGTTGAATAGGCAGCTACTGCCTATGGGCACTGGGAAGCTGTCAGATCACAACAAGAGCATGCTGATGGGCCGAAAACAAACTGATGTTATACCTGAAGACCTATCTATTGGCGTAACCTCCGAGTTTGTTGGGAATCAACCACAAATTTCTTCAAAAAGAAAAATGGCTAATGCCACTTTGGATGGTGATGGTCAAACTCAAAAGAGAAACAAGTGTAGAACTTTCGGCCGAAGTTCTGTCGATCTCAATGAAGCCAACAACAAACGGAATGCAAAGGAAGATGAGATGTGAGGTCATGGGGATGAAGAACCCTGCAGACATACTTTTGCTTTGTGAAAAAGGGCCTGATGTTTTTTGCTCTGAGAGTTGGTAGGGTTTGTGAGCCACCTCACCAAGCATCAATGATGCATATTTTTCATTATGCTACACTTGGATGTCTCAATTTAATCTACTGAGACTCTTTTTCGTTGATGATCACTGGCTCACTGCTCATGTAAATCCTGGAGAGTATTTATTGTTGAAACGAAGACATGATCTTCTGT]
[+] EMBL AK104064             [                                                                                                                                                                                                                                                                  CTGCTATGACCTCGTCAAGGCAAACAAGCGTTCTCTGATTGGTGGGCTCGACAATATCAAGAATCAATACGATAATCCTGAATGTATCGCCTATTCTATAGCCTCTTGCCTTGAGATAGCAGACAGGATTAAGACGGTTCTTCAGGGAAAAAATCCCGACTCCGTAAAAGAGATAGACCCAACTGCCATTGTTGACATGTTTGATGGTAAGTGCTTGGCCAACTGTTCTGATGGCACATCGGGAATCGGAAAACTTGTTACAATGGCGCTTGCTGTCCAAACTGATGGCATACAATCTACCGATCATTCAAGGCTTTACACTGCTGTAGCAGTGGAAACAATTGATAAGTATGACTTTGAAGGGATATGTGCCACACTTGCTGATGGCATTCCGCTTGTTGGTGCGTTTTACTGCGGCAGCAGATTGGAAAAGCTTGAGTATTGCCAAATTTACAGAGTGCCCAAACTATCCAAATTCCTGGATAGAAATCTGATTCCTACTGGCCATGCTGCTGTTATCATTGGGGCTGGAATGCGCTGCGGGATACAATATTTGTATTTTCTAAATTCGTGGGGTAACTTCTTTTGCCCACGCTATGACAAAGATGGTAATCTTGTGAAAGCTGGAGTTGGAAAGTTGAGGTTTTATGATTTGCTCTGCAATCCGATTATGTTCATAACAGATTCTGCCAAGCGTGTTGGGTTGAATAGGCAGCTACTGCCTATGGGCACTGGGAAGCTGTCAGATCACAACAAGAGCATGCTGATGGGCCGAAAACAAACTGATGTTATACCTGAAGACCTATCTATTGGCGTAACCTCCGAGTTTGTTGGGAATCAACCACAAATTTCTTCAAAAAGAAAAATGGCTAATGCCACTTTGGATGGTGATGGTCAAACTCAAAAGAGAAACAAGTGTAGAACTTTCGGCCGAAGTTCTGTCGATCTCAATGAAGCCAACAACAAACGGAATGCAAAGGAAGATGAGATGTGAGGTCATGGGGATGAAGAACCCTGCAGACATACTTTTGCTTTGTGAAAAAGGGCCTGATGTTTTTTGCTCTGAGAGTTGGTAGGGTTTGTGAGCCACCTCACCAAGCATCAATGATGCATATTTTTCATTATGCTACACTTGGATGTCTCAATTTAATCTACTGAGACTCTTTTTCGTTGATGATCACTGGCTCACTGCTCATGTAAATCCTGGAGAGTA                                ]


>consensus_2707#0 CAATCGCCGCCGCCTGTCGCCGCCGCCGCCGCCGCCTCCATATTCTAGCTCTCGGTGATC TCTGATGGAGCCCGAAGGCGGCGTCAGGCTGCCAACCCTAGATCGCGTCAGGCGCGGCGT CAGAAGTAGCTGTGATACCGAGAGCTGGGAATGCTTTCAATGCGGTTCGATAAACCTCCC TGTTGAGAAACTACTGTTTGATCTACCAGCATTCCATTGTCGTGGATGCGAAGCTCCGTT TCTTGGTGAAATGAACTTCTGCTATGACCTCGTCAAGGCAAACAAGCGTTCTCTGATTGG TGGGCTCGACAATATCAAGAATCAATACGATAATCCTGAATGTATCGCCTATTCTATAGC CTCTTGCCTTGAGATAGCAGACAGGATTAAGACGGTTCTTCAGGGAAAAAATCCCGACTC CGTAAAAGAGATAGACCCAACTGCCATTGTTGACATGTTTGATGGTAAGTGCTTGGCCAA CTGTTCTGATGGCACATCGGGAATCGGAAAACTTGTTACAATGGCGCTTGCTGTCCAAAC TGATGGCATACAATCTGCCGATCATTCAAGGCTTTACACTGCTGTAGCAGTGGAAACAAT TGATAAGTATGACTTTGAAGGGATATGTGCCACACTTGCTGATGGCATTCCGCTTGTTGG TGCGTTTTACTGCGGCAGCAGATTGGAAAAGCTTGAGTATTGCCAAATTTACAGAGTGCC CAAACTATCCAAATTCCTGGATAGAAATCTGATTCCTACTGGCCATGCTGCTGTTATCAT TGGGGCTGGAATGCGCTGCGGGATACAATATTTGTATTTTCTAAATTCGTGGGGTAACTT CTTTTGCCCACGCTATGACAAAGATGGTAATCTTGTGAAAGCTGGAGTTGGAAAGTTGAG GTTTTATGATTTGCTCTGCAATCCGATTATGTTCATAACAGATTCTGCCAAGCGTGTTGG GTTGAATAGGCAGCTACTGCCTATGGGCACTGGGAAGCTGTCAGATCACAACAAGAGCAT GCTGATGGGCCGAAAACAAACTGATGTTATACCTGAAGACCTATCTATTGGCGTAACCTC CGAGTTTGTTGGGAATCAACCACAAATTTCTTCAAAAAGAAAAATGGCTAATGCCACTTT GGATGGTGATGGTCAAACTCAAAAGAGAAACAAGTGTAGAACTTTCGGCCGAAGTTCTGT CGATCTCAATGAAGCCAACAACAAACGGAATGCAAAGGAAGATGAGATGTGAGGTCATGG GGATGAAGAACCCTGCAGACATACTTTTGCTTTGTGAAAAAGGGCCTGATGTTTTTTGCT CTGAGAGTTGGTAGGGTTTGTGAGCCACCTCACCAAGCATCAATGATGCATATTTTTCAT TATGCTACACTTGGATGTCTCAATTTAATCTACTGAGACTCTTTTTCGTTGATGATCACT GGCTCACTGCTCATGTAAATCCTGGAGAGTATTTATTGTTGAAACGAAGACATGATCTTC TGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)