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Oryza sativa
cluster # 2726 cluster # 2726       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2726#0 length = 1515 sequences # 2  

consensusID : consensus_2726#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1515
fasta sequence
                              [CAGGCGAAGATGGCGCCACCGTGCGGCCGCGTGGTCCTCTTCCCGATGCCGTACCCGGGCCACACCATCCCCATGTTCCACCTCGCCGCCGTGCTCCGCTCCCGTGGCTTCTCCATCACCGTCCTCCACACCGAGCTCAGAGCGCCGGACCCGGCGGCGCATCCGCCGGAGTACCGCTTCGTGGCCGTGGCCGACGGCACCCCGCCCGAGCTCGTGGTGTCCGAGGACGCCGCGGCGGTCCTGACTTCGCTCAACGAGACCTGCGCCGCGCCGTTCGCGGACCGGCTGGCCGCGCTGCTCGCCGAGGAGGGCGGCGTCCTGTGCGTAATCGCCGACGTGATGTGGTACGCGCCGGCGGCGGCGGCGCCAGAGCTCGGCGTGCCGCTGATGCTGCTGATGACGAGCAGCGCGTCGAGCTTCCGGACGTTCATGGAGTACCCTCTTCTGCTTGAGAGGGGCTTCTTGCCTGTCGACGATGCCCAAAAGGACACTCTAGTCGACATTCTCCCCCCTTTCCGAGTGAAGGATCTACAGCGCATTGACACGACAAACCTCTACAGCTTCGCCAACGTGCTTGCCAATGTAGTCGCCGCAGCGCGGCTGTCATCAGGGCTCATACTCAACACCTTCGACTTCATCGAGGGTGACAACATTTGCAGGATCCGCGACGAGCTCTCCATCCCTGTGTTTGCCATTGGTCCACTCAACAAACTCATACCACTCGTCGGAAGAAGCAGCTTTCTTCCCCCAGATTGTGATTGCCTGAGGTGGCTTGACACACAAGCCCCTAGCTCTGTGTTGTTCGTGAGCTTCGGCACCATGGCCACCATTGATGCTCAGGAGTTTCTGGAGGTGGCATGGGGCTTGGCTGGCACCAAGCTACCATTTCTATGGGTGGTTCGGCCAAGCCTTGTCCGTGGGTTACGGCTGCATTCCAGTGAGCTCCCTAGTGATTTGCAGGAAGAGATCAATGGTCGAGGCAGGATAGTCTCTTGGGCACCGCAAGAAAAGGTACTAGGTCACCCTTCTGTCCGCGCATTCATGACGCATAATGGATGGAACTCGACGATAGAGAGTATATCTGAAGGCGTGCCGATGATATGTAGGCCATGTTTTGGAGATCAGATGGGAAATGCGAGGTATGTTTGTGCTGTTTGGAGGTTGGGTGTGGAGATGGAGGTAGGGAGTGTTCTGCAGAGGGCAAAAGTTCAAACTGCTGTTGAGAAATTAGTGAATGGGGAGGAAGGTCAAAATGTGAAACAGAGAATGAGAAATCTGAGGATAGAAGCTGAAAAATGTGTTAGTAAAGGAGGATCATCAGACACCGGTCTACGTAACTTAGTAGATTCGATATTATCTTTTGGAAAATGTTGATTATCTGCACAGATATAACGTAGTCATGTCTTCGACTAATACTTGTAGCCTCTTTAAATGCGGATGGTATTGAGAAGATCATTAAATGTTGTAATATCTAGTTTTCATCTACTACTAATAACCAGGTTCAAAAATTGCCGA]

[+] EMBL AK099588             [CAGGCGAAGATGGCGCCACCGTGCGGCCGCGTGGTCCTCTTCCCGATGCCGTACCCGGGCCACACCATCCCCATGTTCCACCTCGCCGCCGTGCTCCGCTCCCGTGGCTTCTCCATCACCGTCCTCCACACCGAGCTCAGAGCGCCGGACCCGGCGGCGCATCCGCCGGAGTACCGCTTCGTGGCCGTGGCCGACGGCACCCCGCCCGAGCTCGTGGTGTCCGAGGACGCCGCGGCGGTCCTGACTTCGCTCAACGAGACCTGCGCCGCGCCGTTCGCGGACCGGCTGGCCGCGCTGCTCGCCGAGGAGGGCGGCGTCCTGTGCGTAATCGCCGACGTGATGTGGTACGCGCCGGCGGCGGCGGCGCCAGAGCTCGGCGTGCCGCTGATGCTGCTGATGACGAGCAGCGCGTCGAGCTTCCGGACGTTCATGGAGTACCCTCTTCTGCTTGAGAGGGGCTTCTTGCCTGTCGACGATGCCCAAAAGGACACTCTAGTCGACATTCTCCCCCCTTTCCGAGTGAAGGATCTACAGCGCATTGACACGACAAACCTCTACAGCTTCGCCAACGTGCTTGCCAATGTAGTCGCCGCAGCGCGGCTGTCATCAGGGCTCATACTCAACACCTTCGACTTCATCGAGGGTGACAACATTTGCAGGATCCGCGACGAGCTCTCCATCCCTGTGTTTGCCATTGGTCCACTCAACAAACTCATACCACTCGTCGGAAGAAGCAGCTTTCTTCCCCCAGATTGTGATTGCCTGAGGTGGCTTGACACACAAGCCCCTAGCTCTGTGTTGTTCGTGAGCTTCGGCACCATGGCCACCATTGATGCTCAGGAGTTTCTGGAGGTGGCATGGGGCTTGGCTGGCACCAAGCTACCATTTCTATGGGTGGTTCGGCCAAGCCTTGTCCGTGGGTTACGGCTGCATTCCAGTGAGCTCCCTAGTGATTTGCAGGAAGAGATCAATGGTCGAGGCAGGATAGTCTCTTGGGCACCGCAAGAAAAGGTACTAGGTCACCCTTCTGTCCGCGCATTCATGACGCATAATGGATGGAACTCGACGATAGAGAGTATATCTGAAGGCGTGCCGATGATATGTAGGCCATGTTTTGGAGATCAGATGGGAAATGCGAGGTATGTTTGTGCTGTTTGGAGGTTGGGTGTGGAGATGGAGGTAGGGAGTGTTCTGCAGAGGGCAAAAGTTCAAACTGCTGTTGAGAAATTAGTGAATGGGGAGGAAGGTCAAAATGTGAAACAGAGAATGAGAAATCTGAGGATAGAAGCTGAAAAATGTGTTAGTAAAGGAGGATCATCAGACACCGGTCTACGTAACTTAGTAGATTCGATATTATCTTTTGGAAAATGTTGATTATCTGCACAGATATAACGTAGTCATGTCTTCGACTAATACTTGTAGCCTCTTTAAATGCGGATGGTATTGAGAAGATCATTAAATGTTGTAATATCTAGTTTTCATCTACTACTAATAACCAGGTTCAAAAATTGCCGA]
[+] EMBL AK105931             [              GCCACCGTGCGGCCGCGTGGTCCTCTTCCCGATGCCGTACCCGGGCCACACCATCCCCATGTTCCACCTCGCCGCCGTGCTCCGCTCCCGTGGCTTCTCCATCACCGTCCTCCACACCGAGCTCAGAGCGCCGGACCCGGCGGCGCATCCGCCGGAGTACCGCTTCGTGGCCGTGGCCGACGGCACCCCGCCCGAGCTCGTGGTGTCCGAGGACGCCGCGGCGGTCCTGACTTCGCTCAACGAGACCTGCGCCGCGCCGTTCGCGGACCGGCTGGCCGCGCTGCTCGCCGAGGAGGGCGGCGTCCTGTGCGTAATCGCCGACGTGATGTGGTACGCGCCGGCGGCGGCGGCGCCAGAGCTCGGCGTGCCGCTGATGCTGCTGATGACGAGCAGCGCGTCGAGCTTCCGGACGTTCATGGAGTACCCTCTTCTGCTTGAGAGGGGCTTCTTGCCTGTCGACGATGCCCAAAAGGACACTCTAGTCGACATTCTCCCCCCTTTCCGAGTGAAGGATCTACAGCGCATTGACACGACAAACCTCTACAGCTTCGCCAACGTGCTTGCCAATGTAGTCGCCGCAGCGCGGCTGTCATCAGGGCTCATACTCAACACCTTCGACTTCATCGAGGGTGACAACATTTGCAGGATCCGCGACGAGCTCTCCATCCCTGTGTTTGCCATTGGTCCACTCAACAAACTCATACCACTCGTCGGAAGAAGCAGCTTTCTTCCCCCAGATTGTGATTGCCTGAGGTGGCTTGACACACAAGCCCCTAGCTCTGTGTTGTTCGTGAGCTTCGGCACCATGGCCACCATTGATGCTCAGGAGTTTCTGGAGGTGGCATGGGGCTTGGCTGGCACCAAGCTACCATTTCTATGGGTGGTTCGGCCAAGCCTTGTCCGTGGGTTACGGCTGCATTCCAGTGAGCTCCCTAGTGATTTGCAGGAAGAGATCAATGGTCGAGGCAGGATAGTCTCTTGGGCACCGCAAGAAAAGGTACTAGGTCACCCTTCTGTCCGCGCATTCATGACGCATAATGGATGGAACTCGACGATAGAGAGTATATCTGAAGGCGTGCCGATGATATGTAGGCCATGTTTTGGAGATCAGATGGGAAATGCGAGGTATGTTTGTGCTGTTTGGAGGTTGGGTGTGGAGATGGAGGTAGGGAGTGTTCTGCAGAGGGCAAAAGTTCAAACTGCTGTTGAGAAATTAGTGAATGGGGAGGAAGGTCAAAATGTGAAACAGAGAATGAGAAATCTGAGGATAGAAGCTGAAAAATGTGTTAGTAAAGGAGGATCATCAGACACCGGTCTACGTAACTTAGTAGATTCGATATTATCTTTTGGAAAATGTTGATTATCTGCACAGATATAACGTAGTCATGTCTTCGACTAATACTTGTAGCCTCTTTAAATGCGGATGGTATTGAGAAGATCATTAAATGTTGTAATATCTAGTTTTCATCTACTACTAATAACCAGGTTCA           ]


>consensus_2726#0 CAGGCGAAGATGGCGCCACCGTGCGGCCGCGTGGTCCTCTTCCCGATGCCGTACCCGGGC CACACCATCCCCATGTTCCACCTCGCCGCCGTGCTCCGCTCCCGTGGCTTCTCCATCACC GTCCTCCACACCGAGCTCAGAGCGCCGGACCCGGCGGCGCATCCGCCGGAGTACCGCTTC GTGGCCGTGGCCGACGGCACCCCGCCCGAGCTCGTGGTGTCCGAGGACGCCGCGGCGGTC CTGACTTCGCTCAACGAGACCTGCGCCGCGCCGTTCGCGGACCGGCTGGCCGCGCTGCTC GCCGAGGAGGGCGGCGTCCTGTGCGTAATCGCCGACGTGATGTGGTACGCGCCGGCGGCG GCGGCGCCAGAGCTCGGCGTGCCGCTGATGCTGCTGATGACGAGCAGCGCGTCGAGCTTC CGGACGTTCATGGAGTACCCTCTTCTGCTTGAGAGGGGCTTCTTGCCTGTCGACGATGCC CAAAAGGACACTCTAGTCGACATTCTCCCCCCTTTCCGAGTGAAGGATCTACAGCGCATT GACACGACAAACCTCTACAGCTTCGCCAACGTGCTTGCCAATGTAGTCGCCGCAGCGCGG CTGTCATCAGGGCTCATACTCAACACCTTCGACTTCATCGAGGGTGACAACATTTGCAGG ATCCGCGACGAGCTCTCCATCCCTGTGTTTGCCATTGGTCCACTCAACAAACTCATACCA CTCGTCGGAAGAAGCAGCTTTCTTCCCCCAGATTGTGATTGCCTGAGGTGGCTTGACACA CAAGCCCCTAGCTCTGTGTTGTTCGTGAGCTTCGGCACCATGGCCACCATTGATGCTCAG GAGTTTCTGGAGGTGGCATGGGGCTTGGCTGGCACCAAGCTACCATTTCTATGGGTGGTT CGGCCAAGCCTTGTCCGTGGGTTACGGCTGCATTCCAGTGAGCTCCCTAGTGATTTGCAG GAAGAGATCAATGGTCGAGGCAGGATAGTCTCTTGGGCACCGCAAGAAAAGGTACTAGGT CACCCTTCTGTCCGCGCATTCATGACGCATAATGGATGGAACTCGACGATAGAGAGTATA TCTGAAGGCGTGCCGATGATATGTAGGCCATGTTTTGGAGATCAGATGGGAAATGCGAGG TATGTTTGTGCTGTTTGGAGGTTGGGTGTGGAGATGGAGGTAGGGAGTGTTCTGCAGAGG GCAAAAGTTCAAACTGCTGTTGAGAAATTAGTGAATGGGGAGGAAGGTCAAAATGTGAAA CAGAGAATGAGAAATCTGAGGATAGAAGCTGAAAAATGTGTTAGTAAAGGAGGATCATCA GACACCGGTCTACGTAACTTAGTAGATTCGATATTATCTTTTGGAAAATGTTGATTATCT GCACAGATATAACGTAGTCATGTCTTCGACTAATACTTGTAGCCTCTTTAAATGCGGATG GTATTGAGAAGATCATTAAATGTTGTAATATCTAGTTTTCATCTACTACTAATAACCAGG TTCAAAAATTGCCGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)