Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 273 cluster # 273       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_273#0 length = 764 sequences # 2  

consensusID : consensus_273#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 764
fasta sequence
                              [TTTTTTTTTTTAACATTAAACATCCTTTGTGACTTTCATTCAGTTATAATCAGAAGGAAAACCACCTGAATTCCAACATAATTGACAAGTTGAGAAAGCCTGAGAGACTCATAAGCATTGAGCTTCCCCAAAAGTTAGCAACGTCCCCTGATTAGACCT-TAAAAGAGTTCATAAGTTCAAAACCATCTAAGAAGACTTCATCTAACCGAACTTCTGAAACAAAATACAGG-TCGACCCCTATATAACTATATAGCATCAGGTATATCATCCACCTGAATTCCAACATAATTGACAACAAGTTGAGAAAGCCTAAGAGACTCATAAGCCAGCTTCCCCCAAGTTAGCAACATCCCCTGATTACACCTCAAAAGAGTTCATAAGTTTCAAAACCATCTAAGCGGACTCCATCTAACCAAACTTCTGAAACAAAACATAGGTCGACCCCTATATAACTATATAGCATCAGGTATATCATCCACACTACCAGCTTCCTTTAGCCTTTTCCTTAGTTCTTCCTCTTACCTGATTTGGCTTTTGGAAACCACATACNAATGGCGGCCTGGACATCATAGTCAAGGATGGGGGCATAATCATCATCATCAAGATGACTTCTAGCTGCACATGGTGGATGCACAATCGTGCTTGCTTCACCACAGAAGATACCACGACCAANNAC-AGGGCTACTATCTTGAACAGGGCAGCACATGGGTTTTGCATGTGATTCATAAAATCGACCAGGTTGTGAGTCCCAGAATTCAGCGAAG]

[+] EMBL CA760560             [TTTTTTTTTTTAACATTAAACATCCTTTGTGACTTTCATTCAGTTATAATCAGAAGGAAAACCACCTGAATTCCAACATAATTGACAAGTTGAGAAAGCCTGAGAGACTCATAAGCATTGAGCTTCCCCAAAAGTTAGCAACGTCCCCTGATTAGACCT TAAAAGAGTTCATAAGTTCAAAACCATCTAAGAAGACTTCATCTAACCGAACTTCTGAAACAAAATACAGG TCGACCCCTATATAACTATATAGCATCAGGTATATCATCCACCTGAATTCCAACATAATTGACAACAAGTTGAGAAAGCCTAAGAGACTCATAAGCCAGCTTCCCCCAAGTTAGCAACATCCCCTGATTACACCTCAAAAGAGTTCATAAGTTTCAAAACCATCTAAGCGGACTCCATCTAACCAAACTTCTGAAACAAAACATAGGTCGACCCCTATATAACTATATAGCATCAGGTATATCATCCACACTACCAGCTTCCTTTAGCCTTTTCCTTAGTTCTTCCTCTTACCTGATTTGGCTTTTGGAAACCACATACNAATGGCGGCCTGGACATCATAGTCAAGGATGGGGGCATAATCATCATCATCAAGATGACTTCTAGCTGCACATGGTGGATGCACAATCGTGCTTGCTTCACCACAGAAGATACCACGACCAANNAC AGGGCTACTATCTTGAAC                                                                      ]
[+] EMBL CB630554             [                                                                                                                                         GCAACGTCCCCTGATTA CCATATAAAAGAGTTCATAAGTTCAAAACCATCTAAGAAGACTTCATCTAACCGAACTTCTGAAACAAAATATTGGCTC AAAACTATATAACTATATAGCATCAGGTATATCATCCACCTGAATTCCAACATAATTGACAACAAGTTGAGAAAGCCTAAGAGACTCATAAGCCAGCTTCCCCCAAGTTAGCAACATCCCCTGATTACACCTCAAAAGAGTTCATAAGTTTCAAAACCATCTAAGCGGACTCCATCTAACCAAACTTCTGAAACAAAACATAGGTCGACCCCTATATAACTATATAGCATCAGGTATATCATCCACTCTACGAGGTTCCTTTAGCCTTTTCCTTAGTTCTTCCTCTTACCTGATTTGGCTTTTGGAAACCACATACGAATGGCGGCCTGGACATCATAGTCAAGGATGGGGGCATAATCATCATCATCAAGATGACTTCTAGCTGCACATGGTGGATGCACAATCGTGCTTGCTTCACCACGGAAGATACAACGACCAA AACAAGGGCTACTATCTTGAACAGGGCAGCACATGGGTTTTGCATGTGATTCATAAAATCGACCAGGTTGTGAGTCCCAGAATTCAGCGAAG]


>consensus_273#0 TTTTTTTTTTTAACATTAAACATCCTTTGTGACTTTCATTCAGTTATAATCAGAAGGAAA ACCACCTGAATTCCAACATAATTGACAAGTTGAGAAAGCCTGAGAGACTCATAAGCATTG AGCTTCCCCAAAAGTTAGCAACGTCCCCTGATTAGACCTTAAAAGAGTTCATAAGTTCAA AACCATCTAAGAAGACTTCATCTAACCGAACTTCTGAAACAAAATACAGGTCGACCCCTA TATAACTATATAGCATCAGGTATATCATCCACCTGAATTCCAACATAATTGACAACAAGT TGAGAAAGCCTAAGAGACTCATAAGCCAGCTTCCCCCAAGTTAGCAACATCCCCTGATTA CACCTCAAAAGAGTTCATAAGTTTCAAAACCATCTAAGCGGACTCCATCTAACCAAACTT CTGAAACAAAACATAGGTCGACCCCTATATAACTATATAGCATCAGGTATATCATCCACA CTACCAGCTTCCTTTAGCCTTTTCCTTAGTTCTTCCTCTTACCTGATTTGGCTTTTGGAA ACCACATACNAATGGCGGCCTGGACATCATAGTCAAGGATGGGGGCATAATCATCATCAT CAAGATGACTTCTAGCTGCACATGGTGGATGCACAATCGTGCTTGCTTCACCACAGAAGA TACCACGACCAANNACAGGGCTACTATCTTGAACAGGGCAGCACATGGGTTTTGCATGTG ATTCATAAAATCGACCAGGTTGTGAGTCCCAGAATTCAGCGAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)