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Oryza sativa
cluster # 2777 cluster # 2777       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2777#0 length = 1001 sequences # 2  

consensusID : consensus_2777#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1001
fasta sequence
                              [AGCCTCTCGCAACCTTAGCTACAGTCCTACAGAAACAAAAGGAGAGCGCGATCAAGGAACGGGCGTTGCGCGACATCGGCGCGGGTCGGCGCAGATGGGCAACTGCCAGGCGGCGGAGGTGGCGACGGTGGTCATCCAGCACCCGGGCGGCGGCCGCACGGAGCGCGCGTACTGGGCGATGTCCGCGGGCGCCGTCATGGCGGCCAACCCGGGACACTACGTCGCCGCCGTGATCACCTCGCCTCCCGCCGCCGGCGCCTCCTCGGCCACCCCCGCCGCCGCGCCCGTCAAGCACCTCAAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGAAGAGGTGCTGAGAGAGTTCGCGTCGAAGCGGCATGTCAAGCTAAGCCGTGCCACGATCAAGGCCAAGGATGACGTGGAGGAGGAGACGAATCCCGCCAAGCCTCGCCGCCGGCGAGGCAGCGGCGGCATCGCGCCAGAGGAGGAGTACTCCAGCCGGTCACTCGCAAAGGTCATGCGCCAGAGTGACGAGCCGGAGCCCGTGGCGAGGGCGAGCCCGTCCGCCGCGCCGAAGCCGGAGAGCGACATTGATGACCACGCCGACGGCGAGGCGGCCGAGCCGGACTGCGACCTGGAGGCGCTGCTGCCGCCGCACGGGGTGGTGTTCGGCCGGCGAGTCGCCCGGCAATGGAGACCGGCGCTGCAGAGCATTGCGGAAGGGTGAGGCCGACCCACTGGCTCAGGCTGGCCGACGGCGAGCCGGCTGCAAGACTTCGTCGTCGACTCGTCGTTTCCGAGCACACAGCGTAGTACTGCAGTTGTAGAAAGTGAAGTAGTGACAAGTCTCACTGGACGTGTAGCGTGACAAGTCATGTAGAATAAAGCTACGAGTA-CCTTGTGGATATATCCAGCTGATGCATGTACGTATACTATGGATTGATGATGGGTGTAACGTGACGGATCGTATACTCCAAAAAAAAAAA]

[+] EMBL AK066091             [AGCCTCTCGCAACCTTAGCTACAGTCCTACAGAAACAAAAGGAGAGCGCGATCAAGGAACGGGCGTTGCGCGACATCGGCGCGGGTCGGCGCAGATGGGCAACTGCCAGGCGGCGGAGGTGGCGACGGTGGTCATCCAGCACCCGGGCGGCGGCCGCACGGAGCGCGCGTACTGGGCGATGTCCGCGGGCGCCGTCATGGCGGCCAACCCGGGACACTACGTCGCCGCCGTGATCACCTCGCCTCCCGCCGCCGGCGCCTCCTCGGCCACCCCCGCCGCCGCGCCCGTCAAGCACCTCAAGCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGAAGAGGTGCTGAGAGAGTTCGCGTCGAAGCGGCATGTCAAGCTAAGCCGTGCCACGATCAAGGCCAAGGATGACGTGGAGGAGGAGACGAATCCCGCCAAGCCTCGCCGCCGGCGAGGCAGCGGCGGCATCGCGCCAGAGGAGGAGTACTCCAGCCGGTCACTCGCAAAGGTCATGCGCCAGAGTGACGAGCCGGAGCCCGTGGCGAGGGCGAGCCCGTCCGCCGCGCCGAAGCCGGAGAGCGACATTGATGACCACGCCGACGGCGAGGCGGCCGAGCCGGACTGCGACCTGGAGGCGCTGCTGCCGCCGCACGGGGTGGTGTTCGGCCGGCGAGTCGCCCGGCAATGGAGACCGGCGCTGCAGAGCATTGCGGAAGGGTGAGGCCGACCCACTGGCTCAGGCTGGCCGACGGCGAGCCGGCTGCAAGACTTCGTCGTCGACTCGTCGTTTCCGAGCACACAGCGTAGTACTGCAGTTGTAGAAAGTGAAGTAGTGACAAGTCTCACTGGACGTGTAGCGTGACAAGTCATGTAGAATAAAGCTACGAGTA CCTTGTGGATATATCCAGCTGATGCATGTACGTATACTATGGATTGATGATGGGTGTAACGTGACGGATCGTATACTCCA          ]
[+] EMBL BI796452             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTCACTGGACGTGTAGCGTGACAAGTCATGTAGAATAAAGCTACGAGTACCCTTGTGGATATATCCAGCTGATGCATGTACGTATACTATGGATTGATGATGGGTGTAACGTGACGGATCGTATACTCCCAAAAAAAAAA]


>consensus_2777#0 AGCCTCTCGCAACCTTAGCTACAGTCCTACAGAAACAAAAGGAGAGCGCGATCAAGGAAC GGGCGTTGCGCGACATCGGCGCGGGTCGGCGCAGATGGGCAACTGCCAGGCGGCGGAGGT GGCGACGGTGGTCATCCAGCACCCGGGCGGCGGCCGCACGGAGCGCGCGTACTGGGCGAT GTCCGCGGGCGCCGTCATGGCGGCCAACCCGGGACACTACGTCGCCGCCGTGATCACCTC GCCTCCCGCCGCCGGCGCCTCCTCGGCCACCCCCGCCGCCGCGCCCGTCAAGCACCTCAA GCTGCTCCGCCCCGACGACACGCTCCTGCTCGGCCGCGTCTACCGCCTCGTCAGCTTCGA AGAGGTGCTGAGAGAGTTCGCGTCGAAGCGGCATGTCAAGCTAAGCCGTGCCACGATCAA GGCCAAGGATGACGTGGAGGAGGAGACGAATCCCGCCAAGCCTCGCCGCCGGCGAGGCAG CGGCGGCATCGCGCCAGAGGAGGAGTACTCCAGCCGGTCACTCGCAAAGGTCATGCGCCA GAGTGACGAGCCGGAGCCCGTGGCGAGGGCGAGCCCGTCCGCCGCGCCGAAGCCGGAGAG CGACATTGATGACCACGCCGACGGCGAGGCGGCCGAGCCGGACTGCGACCTGGAGGCGCT GCTGCCGCCGCACGGGGTGGTGTTCGGCCGGCGAGTCGCCCGGCAATGGAGACCGGCGCT GCAGAGCATTGCGGAAGGGTGAGGCCGACCCACTGGCTCAGGCTGGCCGACGGCGAGCCG GCTGCAAGACTTCGTCGTCGACTCGTCGTTTCCGAGCACACAGCGTAGTACTGCAGTTGT AGAAAGTGAAGTAGTGACAAGTCTCACTGGACGTGTAGCGTGACAAGTCATGTAGAATAA AGCTACGAGTACCTTGTGGATATATCCAGCTGATGCATGTACGTATACTATGGATTGATG ATGGGTGTAACGTGACGGATCGTATACTCCAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)