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Oryza sativa
cluster # 2809 cluster # 2809       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2809#0 length = 1187 sequences # 2  

consensusID : consensus_2809#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1187
fasta sequence
                              [CCGCCGCACGCGGCCTCCTCCTTCCCCTCCCCCCTCAACAACCCAACCGCCTCCTCCTCCAAACAAATCCACGGGGAACCATCTCTCTCTCCTCGCCCCCGCCGCCGCCGCTGCTCCTCCTCCGATCGGTGGAGCAGCAGCCTTCATGAAGGGCGAGGCGGGTCTCGATCGGTGGAGGGGGAGAGATTTCTCCTCCAGTTTTCCTCTAGTTTTGATCCTGGAGGAGGTGGCTGCTGCATCTTCTTCTTCACCGAAGATTGGAGGAGTGGATTTCGTGTGGTTGTTGCGGCCGACCGCTTTCTTGCTCTCTTGGCTCGTCGGCCTCCGCCGCCGATGCTGCGGGATGCCGTCCCCCGACGCCGCCGCCGGCGATATTGAGAGCGCCCTCGACGACTTCGCCCGCGCCGACGCCGACTGCATCGCCGCCGCCCTCGCCTGCGGCCGCACCAGCTTCTCCTACCGCCGCCTCCCCGAGCCGCGCCGCCTCCGCCTCACCGTCCGCAAGCTCGACGACTCCTACTTCGATGTGCAAATCGCGAGGTCAGCCGCGGTGTGGGAGCTCAAGGCGGCCATCGAGGACGTGTTCGCCGCGCTCTACGATGAAACGGACAACAAGGCCATCTCTTGGCAGCACGTGTGGAGCCACTTTTGCTTATGTTTCAAGGACGAGAAATTGACAGATGACAAGGCAACATTGCGTGCATTTGGTATAAGAGATGGTGATGAGGTTCATTTTGCCCAGCATCTTTCTGTTGAATACAGACCCTGCAAGTCCCTTTCCCTCAGAAGGTCAAGGACTTCATTGGATGATTTCAGTGCTAGGTCAAGGAGTTTGTTGGACGATCTCGGCGAAGATGATGGTGATAAGTTTATCGACACGAGGCATTCTACTAGTGCTTTGGAGGAAGGGCTATATGTTTATCAGCACGATGAGGAGCGCATGGAAGAGAGTCGCAAGAAGGGAGGCTTCTTTAGCGGTTGGTTCTCCTATTCTAGATTGAGGGGCAACAGTAGGACACATTCAGAGGATGCCATCCAATCCTCCTGCGAAAAGAGAGATACTCGAACTCGGCCAAAGCTGGGGAGATGGTTGTCTTCCAAAAAAACTAAAGGCACATAGCAATCTGGATTGCCAACTGTATCTCACACGTGTTGCTTTGTTCTTCTGAAATGAAAATCAAAATTAC]

[+] EMBL AK106917             [CCGCCGCACGCGGCCTCCTCCTTCCCCTCCCCCCTCAACAACCCAACCGCCTCCTCCTCCAAACAAATCCACGGGGAACCATCTCTCTCTCCTCGCCCCCGCCGCCGCCGCTGCTCCTCCTCCGATCGGTGGAGCAGCAGCCTTCATGAAGGGCGAGGCGGGTCTCGATCGGTGGAGGGGGAGAGATTTCTCCTCCAGTTTTCCTCTAGTTTTGATCCTGGAGGAGGTGGCTGCTGCATCTTCTTCTTCACCGAAGATTGGAGGAGTGGATTTCGTGTGGTTGTTGCGGCCGACCGCTTTCTTGCTCTCTTGGCTCGTCGGCCTCCGCCGCCGATGCTGCGGGATGCCGTCCCCCGACGCCGCCGCCGGCGATATTGAGAGCGCCCTCGACGACTTCGCCCGCGCCGACGCCGACTGCATCGCCGCCGCCCTCGCCTGCGGCCGCACCAGCTTCTCCTACCGCCGCCTCCCCGAGCCGCGCCGCCTCCGCCTCACCGTCCGCAAGCTCGACGACTCCTACTTCGATGTGCAAATCGCGAGGTCAGCCGCGGTGTGGGAGCTCAAGGCGGCCATCGAGGACGTGTTCGCCGCGCTCTACGATGAAACGGACAACAAGGCCATCTCTTGGCAGCACGTGTGGAGCCACTTTTGCTTATGTTTCAAGGACGAGAAATTGACAGATGACAAGGCAACATTGCGTGCATTTGGTATAAGAGATGGTGATGAGGTTCATTTTGCCCAGCATCTTTCTGTTGAATACAGACCCTGCAAGTCCCTTTCCCTCAGAAGGTCAAGGACTTCATTGGATGATTTCAGTGCTAGGTCAAGGAGTTTGTTGGACGATCTCGGCGAAGATGATGGTGATAAGTTTATCGACACGAGGCATTCTACTAGTGCTTTGGAGGAAGGGCTATATGTTTATCAGCACGATGAGGAGCGCATGGAAGAGAGTCGCAAGAAGGGAGGCTTCTTTAGCGGTTGGTTCTCCTATTCTAGATTGAGGGGCAACAGTAGGACACATTCAGAGGATGCCATCCAATCCTCCTGCGAAAAGAGAGATACTCGAACTCGGCCAAAGCTGGGGAGATGGTTGTCTTCCAAAAAAACTAAAGGCACATAGCAATCTGGATTGCCAACTGTATCTCACACGTGTTGCTTTGTTCTTCTGAAATGAAAATCA       ]
[+] EMBL AK102004             [                                                                              CCATCTCTCTCTCCTCGCCCCCGCCGCCGCCGCTGCTCCTCCTCCGATCGGTGGAGCAGCAGCCTTCATGAAGGGCGAGGCGGGTCTCGATCGGTGGAGGGGGAAAGATTTCTCCTCCAGTTTTCCTCTAGTTTTGATCCTGGAGGAGGTGGCTGCTGCATCTTCTTCTTCACCGAAGATTGGAGGAGTGGATTTCGTGTGGTTGTTGCGGCCGACCGCTTTCTTGCTCTCTTGGCTCGTCGGCCTCCGCCGCCGATGCTGCGGGATGCCGTCCCCCGACGCCGCCGCCGGCGATATTGAGAGCGCCCTCGACGACTTCGCCCGCGCCGACGCCGACTGCATCGCCGCCGCCCTCGCCTGCGGCCGCACCAGCTTCTCCTACCGCCGCCTCCCCGAGCCGCGCCGCCTCCGCCTCACCGTCCGCAAGCTCGACGACTCCTACTTCGATGTGCAAATCGCGAGGTCAGCCGCGGTGTGGGAGCTCAAGGCGGCCATCGAGGACGTGTTCGCCGCGCTCTACGATGAAACGGACAACAAGGCCATCTCTTGGCAGCACGTGTGGAGCCACTTTTGCTTATGTTTCAAGGACGAGAAATTGACAGATGACAAGGCAACATTGCGTGCATTTGGTATAAGAGATGGTGATGAGGTTCATTTTGCCCAGCATCTTTCTGTTGAATACAGACCCTGCAAGTCCCTTTCCCTCAGAAGGTCAAGGACTTCATTGGATGATTTCAGTGCTAGGTCAAGGAGTTTGTTGGACGATCTCGGCGAAGATGATGGTGATAAGTTTATCGACACGAGGCATTCTACTAGTGTTTTGGAGGAAGGGCTATATGTTTATCAGCACGATGAGGAGCGCATGGAAGAGAGTCGCAAGAAGGGAGGCTTCTTTAGCGGTTGGTTCTCCTATTCTAGATTGAGGGGCAACAGTAGGACACATTCAGAGGATGCCATCCAATCCTCCTGCGAAAAGAGAGATACTCGAACTCGGCCAAAGCTGGGGAGATGGTTGTCTTCCAAAAAAACTAAAGGCACATAGCAATCTAGATTGCCAACTGTATCTCACACGTGTTGCTTTGTTCTTCTGAAATGAAAATCAAAATTAC]


>consensus_2809#0 CCGCCGCACGCGGCCTCCTCCTTCCCCTCCCCCCTCAACAACCCAACCGCCTCCTCCTCC AAACAAATCCACGGGGAACCATCTCTCTCTCCTCGCCCCCGCCGCCGCCGCTGCTCCTCC TCCGATCGGTGGAGCAGCAGCCTTCATGAAGGGCGAGGCGGGTCTCGATCGGTGGAGGGG GAGAGATTTCTCCTCCAGTTTTCCTCTAGTTTTGATCCTGGAGGAGGTGGCTGCTGCATC TTCTTCTTCACCGAAGATTGGAGGAGTGGATTTCGTGTGGTTGTTGCGGCCGACCGCTTT CTTGCTCTCTTGGCTCGTCGGCCTCCGCCGCCGATGCTGCGGGATGCCGTCCCCCGACGC CGCCGCCGGCGATATTGAGAGCGCCCTCGACGACTTCGCCCGCGCCGACGCCGACTGCAT CGCCGCCGCCCTCGCCTGCGGCCGCACCAGCTTCTCCTACCGCCGCCTCCCCGAGCCGCG CCGCCTCCGCCTCACCGTCCGCAAGCTCGACGACTCCTACTTCGATGTGCAAATCGCGAG GTCAGCCGCGGTGTGGGAGCTCAAGGCGGCCATCGAGGACGTGTTCGCCGCGCTCTACGA TGAAACGGACAACAAGGCCATCTCTTGGCAGCACGTGTGGAGCCACTTTTGCTTATGTTT CAAGGACGAGAAATTGACAGATGACAAGGCAACATTGCGTGCATTTGGTATAAGAGATGG TGATGAGGTTCATTTTGCCCAGCATCTTTCTGTTGAATACAGACCCTGCAAGTCCCTTTC CCTCAGAAGGTCAAGGACTTCATTGGATGATTTCAGTGCTAGGTCAAGGAGTTTGTTGGA CGATCTCGGCGAAGATGATGGTGATAAGTTTATCGACACGAGGCATTCTACTAGTGCTTT GGAGGAAGGGCTATATGTTTATCAGCACGATGAGGAGCGCATGGAAGAGAGTCGCAAGAA GGGAGGCTTCTTTAGCGGTTGGTTCTCCTATTCTAGATTGAGGGGCAACAGTAGGACACA TTCAGAGGATGCCATCCAATCCTCCTGCGAAAAGAGAGATACTCGAACTCGGCCAAAGCT GGGGAGATGGTTGTCTTCCAAAAAAACTAAAGGCACATAGCAATCTGGATTGCCAACTGT ATCTCACACGTGTTGCTTTGTTCTTCTGAAATGAAAATCAAAATTAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)