cluster # 2828

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Oryza sativa
cluster # 2828 cluster # 2828 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2828#0 length = 1369 sequences # 2
consensusID : consensus_2828#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1369
fasta sequence
                              [AGACACCTCATCAGGGTGGTCGAAGTCGTCATCCAGAGGCGGCGGCGGCTGCGCCCCCTCTATGACGGGACCCACAGGCGGTGAGGCTTGCCATGGCGCCATCGCCGCGCCTCTCCCCTCCCCTCTCCCCCTTCCCCTCCTGTCGCGAGGCGCTCAAGGCGGCGGAGCTTGGCGGCCACCTGTCTGTCACACTCGGATTTTCCCTTCCCTTAGGTTTCAAATCACTAATAAATGGCTTCAAGAATTTGCTTTAGTTAACCAGAAGAAAACCCCAGTTAGCAATGCATTTAATAATCGGAATTGTTAGGAAGAATTTTTTTCGAATTCTCTTTGCTCTGAAAATCACTAACAGAACTTAAAGGATAAACATCTTCCTCATTTGCCTTTGGTCGTGAATTATGCCCAATTCACTCTCTTCTCAGTCCGCGGTTTCGTTTTGCATGACGAACCGTATCTGTTCGCGGGACCGTTTTCTTTCCTTTTCTAAAACGGCACCGCATTGTTTTTCCTTGTTGGGAAAGTCTCCCCTCTCTGCCAACATTGTTGAAGAAAAGCGAAGAGAAGAAGAAAAGAGAAGAGAAGATAGGAGAGAAGAAGGAAGAGACTTACATGTGGGTCCCACAATTTTTTATTTTTTTATTTTGCTGAGTAGGATGCCACGTCAGCAAACCAGATATCCATACTGCCATGGGACCGAAATTGCATGGTTTTGTAAAGTTTAAGGGTGAACATTTCTGGTTTTGGGGTTTAGGGATGTCATACAAACTCAACGTAAAGTTAAGGGAAGGATGGTGAACTTATTCCAATTTGTTGAGACGGCTGAGCAGCTACGCTTATGGCCCAGCTTCAGGCCGAAACTCTACCCCAGGCCAGCCCAACAGGAAGGATTCGTGTAGCCATTAGCTAGCCCATCACCGACTGGAGGTTTTTTTTTTTTTTAACACATTATAGATTT-GGTTTCGACTATTT-GATATCT-GGTTCATTTTATCATAGG-CATTGTCATGAAGTGCTAACACAATCAAAATGACAACGAATGTATGGCTCATTTTATCATAGGCATTGGTGTAAAACTGGATGTCCCATTTCGAATTTGATTTCTCAGCTTCATTGTAGTTAGACATTATTAGGCATGTAAAAAAAATTGTGACTGAAATCTAGCCTTTGCCAAATGTTCTGTTTTGTCTTTTGATGTTCAACATGGCCATATGTAATAGAGAAGTGAAGCCATAAAATATGTTTGTTTAGGAGGCAAGGCATAAAAGATTGTATTAATCAGATGACCTATATTGCCCTCGAAAACTGCATGCCAACCCAGGAAAACTGTAGCCTATATTCTGATGATTCTTGTTCTGAATTGTGCATATACAAA]

[+] EMBL AK106466             [AGACACCTCATCAGGGTGGTCGAAGTCGTCATCCAGAGGCGGCGGCGGCTGCGCCCCCTCTATGACGGGACCCACAGGCGGTGAGGCTTGCCATGGCGCCATCGCCGCGCCTCTCCCCTCCCCTCTCCCCCTTCCCCTCCTGTCGCGAGGCGCTCAAGGCGGCGGAGCTTGGCGGCCACCTGTCTGTCACACTCGGATTTTCCCTTCCCTTAGGTTTCAAATCACTAATAAATGGCTTCAAGAATTTGCTTTAGTTAACCAGAAGAAAACCCCAGTTAGCAATGCATTTAATAATCGGAATTGTTAGGAAGAATTTTTTTCGAATTCTCTTTGCTCTGAAAATCACTAACAGAACTTAAAGGATAAACATCTTCCTCATTTGCCTTTGGTCGTGAATTATGCCCAATTCACTCTCTTCTCAGTCCGCGGTTTCGTTTTGCATGACGAACCGTATCTGTTCGCGGGACCGTTTTCTTTCCTTTTCTAAAACGGCACCGCATTGTTTTTCCTTGTTGGGAAAGTCTCCCCTCTCTGCCAACATTGTTGAAGAAAAGCGAAGAGAAGAAGAAAAGAGAAGAGAAGATAGGAGAGAAGAAGGAAGAGACTTACATGTGGGTCCCACAATTTTTTATTTTTTTATTTTGCTGAGTAGGATGCCACGTCAGCAAACCAGATATCCATACTGCCATGGGACCGAAATTGCATGGTTTTGTAAAGTTTAAGGGTGAACATTTCTGGTTTTGGGGTTTAGGGATGTCATACAAACTCAACGTAAAGTTAAGGGAAGGATGGTGAACTTATTCCAATTTGTTGAGACGGCTGAGCAGCTACGCTTATGGCCCAGCTTCAGGCCGAAACTCTACCCCAGGCCAGCCCAACAGGAAGGATTCGTGTAGCCATTAGCTAGCCCATCACCGACTGGAGGTTTTTTTTTTTTTTAACACATTATAGATTT GGTTTCGACTATTT GATATCT GGTTCATTTTATCATAGG CATTGTCATGAAGTGCTAACACAATCAAAATGACAACGAATGTATGGCTCATTTTATCATAGGCATTGGTGTAAAACTGGATGTCCCATTTCGAATTTGATTTCTCAGCTTCATTGTAGTTAGACATTATTAGGCATGTAAAAAAAATTGTGACTGAAATCTAGCCTTTGCCAAATGTTCTGTTTTGTCTTTTGATGTTCAACATGGCCATATGTAATAGAGAAGTGAAGCCATAAAATATGTTTGTTTAGGAGGCAAGGCATAAAAGATTGTATTAATCAGATGACCTATATTGCCCTCGAAAACTGCATGCCAACCCAGGAAAACTGTAGCCTATATTCTGATGATTCTTGTTCTGAATTGTGCATATACAAA]
[+] EMBL CA764086             [                                                                                                                                                                                                     TTTTCCCTTCCCTTAGGTTTCAAATCACTAATAAATGGCTTCAAGAATTTGCTTTGGTTAACCAGAAGAAAACCCCAGTTAGCAATGCATTTAATAATCGGAATTGTTAGGAAGAATTTTTTTCGAATTCTCTTTGCTCTGAAAATCACTAACAGAACTTAAAGGATAAACATCTTCTTCATTTGCCTTTGGTCGTGAATTATGCCCAATTCACTCCCTTCTCAGTCCGCGGTTTCGTTTTGCATGACGAACCGTATCTGTTCGCGGGACCGTTTTCTTTCCTTTTCTAAAACGGCACCGCATTGTTTTTCCTTGTTGGGAAAGTCTCCCCTCTCTGCCAACATTGTTGAAGAAAAGCGAAGAGAAGAAGAAAAGAGAAGAGAAGATAGGAGAGAAGAAGGAAGAGACTTACATGTGGGTCCCACAATTTTTTATTTTTTTATTTTGCTGTGTAGGATGCCACGTCAGCAAACCAGATATCCATACTGCCATGGGACCGAAATTGCATGATTTTATAAAGTTTAAGGGTGAACATTTCTGGTTTTGGGGTTTAGGGATGTCATACAAACTCAACGTAAAGGTAAGGGAAGGATGGTGAACTTATTCCAATTTGNTGAGACGGCTGAGCAGCTACGCTTATGGCCCAGCTTCAGGCCGAAACTCTACCCCAGGTCAGCCCAACAGGAAGGATTCATGTAGCCATTAGCTAGCCCATCACCGACTGGAGGGTTTTTTTTTTTTTAACACANTATAGATTTGGGTTTCGACTATTTGGATATCTGGGNTCATTTTATCATAGGCCATGGGCATGAAGGGCTACCNCAATCNAAAGGNCACCGGATGgttn                                                                                                                                                                                                                                                                                                                                         ]




>consensus_2828#0
AGACACCTCATCAGGGTGGTCGAAGTCGTCATCCAGAGGCGGCGGCGGCTGCGCCCCCTC
TATGACGGGACCCACAGGCGGTGAGGCTTGCCATGGCGCCATCGCCGCGCCTCTCCCCTC
CCCTCTCCCCCTTCCCCTCCTGTCGCGAGGCGCTCAAGGCGGCGGAGCTTGGCGGCCACC
TGTCTGTCACACTCGGATTTTCCCTTCCCTTAGGTTTCAAATCACTAATAAATGGCTTCA
AGAATTTGCTTTAGTTAACCAGAAGAAAACCCCAGTTAGCAATGCATTTAATAATCGGAA
TTGTTAGGAAGAATTTTTTTCGAATTCTCTTTGCTCTGAAAATCACTAACAGAACTTAAA
GGATAAACATCTTCCTCATTTGCCTTTGGTCGTGAATTATGCCCAATTCACTCTCTTCTC
AGTCCGCGGTTTCGTTTTGCATGACGAACCGTATCTGTTCGCGGGACCGTTTTCTTTCCT
TTTCTAAAACGGCACCGCATTGTTTTTCCTTGTTGGGAAAGTCTCCCCTCTCTGCCAACA
TTGTTGAAGAAAAGCGAAGAGAAGAAGAAAAGAGAAGAGAAGATAGGAGAGAAGAAGGAA
GAGACTTACATGTGGGTCCCACAATTTTTTATTTTTTTATTTTGCTGAGTAGGATGCCAC
GTCAGCAAACCAGATATCCATACTGCCATGGGACCGAAATTGCATGGTTTTGTAAAGTTT
AAGGGTGAACATTTCTGGTTTTGGGGTTTAGGGATGTCATACAAACTCAACGTAAAGTTA
AGGGAAGGATGGTGAACTTATTCCAATTTGTTGAGACGGCTGAGCAGCTACGCTTATGGC
CCAGCTTCAGGCCGAAACTCTACCCCAGGCCAGCCCAACAGGAAGGATTCGTGTAGCCAT
TAGCTAGCCCATCACCGACTGGAGGTTTTTTTTTTTTTTAACACATTATAGATTTGGTTT
CGACTATTTGATATCTGGTTCATTTTATCATAGGCATTGTCATGAAGTGCTAACACAATC
AAAATGACAACGAATGTATGGCTCATTTTATCATAGGCATTGGTGTAAAACTGGATGTCC
CATTTCGAATTTGATTTCTCAGCTTCATTGTAGTTAGACATTATTAGGCATGTAAAAAAA
ATTGTGACTGAAATCTAGCCTTTGCCAAATGTTCTGTTTTGTCTTTTGATGTTCAACATG
GCCATATGTAATAGAGAAGTGAAGCCATAAAATATGTTTGTTTAGGAGGCAAGGCATAAA
AGATTGTATTAATCAGATGACCTATATTGCCCTCGAAAACTGCATGCCAACCCAGGAAAA
CTGTAGCCTATATTCTGATGATTCTTGTTCTGAATTGTGCATATACAAA
clustalw multiple alignements is not computed in this case