Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2864 cluster # 2864       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2864#0 length = 1032 sequences # 2  
consensusID : consensus_2864#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1032
fasta sequence 
                              [TGCTTTGAATTTGTTAGAGATCAGGGCGGCTTGATTAAGCAAGATTAATTCATTCAAGATTCAACCATGAGGCTGTTCGAGGAGCCACCGGCGAAGCTCACCCACTGGGCTCACCCGGAGCACGAGCTGACGCTGGCCGCCACCGCCGGGGCGCCGTTCCGGTGCGACGGGTGCCAGGAGCCCGGCGGCGACGGGCCGAGGTACAGGTGCGCGCCGTGCAACTTCGACCTCCACACCGACTGCGCCCTCCCGCCGGCCACCCTGCAGCACCCGCTCCTCTTCAAGGGCGGCGGCTGCACCTTCGTCTTCCTCCGCGAGCCCCCCGCGCCCGCCGCCGCCAGCCGGCAGTGCGACGCGTGCGGCGACGACGTGCGCGGGTTCGTCTTCCACTGCGCCGACCGCGACCTCGACCTCCACCCGTGCTGCGCGAGCTTGGAGGACCGCATCGTCACGGGCGGGGGCGGCGACGGCGACGGCCGCGTCTTCGAGCTCACCAAGGCGGCGTCGTCGTCGTCGTCGCGGCGCCGCTGCGGCGTCTGCGGGGACAAGTCGCGCAGGACGTTCTGGTTCTACCGCGGCCGCTTCGACGGCGAGGACGTGTTCATCCACGTGGCGTGCGTGAAGGAGCTCGCCGTGCGGAGGTGGGAGGCGAGCTACCGCCGCCGCAGCGGCGCCGGCCAGATCGCGCTCGCCGGCGCGCCGCTCATGGAGGGCGCCCTGCAGAGCCTGCCAAGGAGGACGCGGCGGAGCGGCGGGTTCGAGCGGTTCAGCAAGATCGTGGGTGTCATCGTGAGCGCCATAATCGCCGTCATCTTCGGGAATCCGATGGGGTTGATCGCCGCGGTGGCCGGCCCTGACGGTCTTCTCCGCGGGTAGAAGACGAGTGGAAAACAGTGTGCTGCTAATTAGCAACAGTCAACGAGTGCGTCACGTGTAGAGTGTTCTTCTCTATGATTTTTTTTTCTTCGTATAAACCCGAATGTTTTATTTTTAATCTTGTGGTGGGTTTGGAATATTTTGAACAAAGATTGG]

[+] EMBL AK103556             [TGCTTTGAATTTGTTAGAGATCAGGGCGGCTTGATTAAGCAAGATTAATTCATTCAAGATTCAACCATGAGGCTGTTCGAGGAGCCACCGGCGAAGCTCACCCACTGGGCTCACCCGGAGCACGAGCTGACGCTGGCCGCCACCGCCGGGGCGCCGTTCCGGTGCGACGGGTGCCAGGAGCCCGGCGGCGACGGGCCGAGGTACAGGTGCGCGCCGTGCAACTTCGACCTCCACACCGACTGCGCCCTCCCGCCGGCCACCCTGCAGCACCCGCTCCTCTTCAAGGGCGGCGGCTGCACCTTCGTCTTCCTCCGCGAGCCCCCCGCGCCCGCCGCCGCCAGCCGGCAGTGCGACGCGTGCGGCGACGACGTGCGCGGGTTCGTCTTCCACTGCGCCGACCGCGACCTCGACCTCCACCCGTGCTGCGCGAGCTTGGAGGACCGCATCGTCACGGGCGGGGGCGGCGACGGCGACGGCCGCGTCTTCGAGCTCACCAAGGCGGCGTCGTCGTCGTCGTCGCGGCGCCGCTGCGGCGTCTGCGGGGACAAGTCGCGCAGGACGTTCTGGTTCTACCGCGGCCGCTTCGACGGCGAGGACGTGTTCATCCACGTGGCGTGCGTGAAGGAGCTCGCCGTGCGGAGGTGGGAGGCGAGCTACCGCCGCCGCAGCGGCGCCGGCCAGATCGCGCTCGCCGGCGCGCCGCTCATGGAGGGCGCCCTGCAGAGCCTGCCAAGGAGGACGCGGCGGAGCGGCGGGTTCGAGCGGTTCAGCAAGATCGTGGGTGTCATCGTGAGCGCCATAATCGCCGTCATCTTCGGGAATCCGATGGGGTTGATCGCCGCGGTGGCCGGCCCTGACGGTCTTCTCCGCGGGTAGAAGACGAGTGGAAAACAGTGTGCTGCTAATTAGCAACAGTCAACGAGTGCGTCACGTGTAGAGTGTTCTTCTCTATGATTTTTTTTTCTTCGTATAAACCCGAATGTTTTATTTTTAATCTTGTGGTGGGTTTGGAATATTTTGAACAAAGATTGG]
[+] EMBL AK108951             [                                                                     AGGCTGTTCGAGGAGCCACCGGCGAAGCTCACCCACTGGGCTCACCCGGAGCACGAGCTGACGCTGGCCGCCACCGCCGGGGCGCCGTTCCGGTGCGACGGGTGCCAGGAGCCCGGCGGCGACGGGCCGAGGTACAGGTGCGCGCCGTGCAACTTCGACCTCCACACCGACTGCGCCCTCCCGCCGGCCACCCTGCAGCACCCGCTCCTCTTCAAGGGCGGCGGCTGCACCTTCGTCTTCCTCCGCGAGCCCCCCGCGCCCGCCGCCGCCAGCCGGCAGTGCGACGCGTGCGGCGACGACGTGCGCGGGTTCGTCTTCCACTGCGCCGACCGCGACCTCGACCTCCACCCGTGCTGCGCGAGCTTGGAGGACCGCATCGTCACGGGCGGGGGCGGCGACGGCGACGGCCGCGTCTTCGAGCTCACCAAGGCGGCGTCGTCGTCGTCGTCGCGGCGCCGCTGCGGCGTCTGCGGGGACAAGTCGCGCAGGACGTTCTGGTTCTACCGCGGCCGCTTCGACGGCGAGGACGTGTTCATCCACGTGGCGTGCGTGAAGGAGCTCGCCGTGCGGAGGTGGGAGGCGAGCTACCGCCGCCGCAGCGGCGCCGGCCAGATCGCGCTCGCCGGCGCGCCGCTCATGGAGGGCGCCCTGCAGAGCCTGCCAAGGAGGACGCGGCGGAGCGGCGGGTTCGAGCGGTTCAGCAAGATCGTGGGTGTCATCGTGAGCGCCATAATCGCCGTCATCTTCGGGAATCCGATGGGGTTGATCGCCGCGGTGGCCGGCCCTGACGGTCTTCTCCGCGGGTAGAAGACGAGTGGAAAACAGTGTGCTGCTAATTAGCAACAGTCAACGAGTGCGTCACGTGTAGAGTGTTCTTCTCTATGATTTTTTTTTCTTCGTATAAACCCGAATGTTTTATTTTTAATCTTGTGGTGGGTTTGGAATATTTTGAACAAAGAT   ]




>consensus_2864#0
TGCTTTGAATTTGTTAGAGATCAGGGCGGCTTGATTAAGCAAGATTAATTCATTCAAGAT
TCAACCATGAGGCTGTTCGAGGAGCCACCGGCGAAGCTCACCCACTGGGCTCACCCGGAG
CACGAGCTGACGCTGGCCGCCACCGCCGGGGCGCCGTTCCGGTGCGACGGGTGCCAGGAG
CCCGGCGGCGACGGGCCGAGGTACAGGTGCGCGCCGTGCAACTTCGACCTCCACACCGAC
TGCGCCCTCCCGCCGGCCACCCTGCAGCACCCGCTCCTCTTCAAGGGCGGCGGCTGCACC
TTCGTCTTCCTCCGCGAGCCCCCCGCGCCCGCCGCCGCCAGCCGGCAGTGCGACGCGTGC
GGCGACGACGTGCGCGGGTTCGTCTTCCACTGCGCCGACCGCGACCTCGACCTCCACCCG
TGCTGCGCGAGCTTGGAGGACCGCATCGTCACGGGCGGGGGCGGCGACGGCGACGGCCGC
GTCTTCGAGCTCACCAAGGCGGCGTCGTCGTCGTCGTCGCGGCGCCGCTGCGGCGTCTGC
GGGGACAAGTCGCGCAGGACGTTCTGGTTCTACCGCGGCCGCTTCGACGGCGAGGACGTG
TTCATCCACGTGGCGTGCGTGAAGGAGCTCGCCGTGCGGAGGTGGGAGGCGAGCTACCGC
CGCCGCAGCGGCGCCGGCCAGATCGCGCTCGCCGGCGCGCCGCTCATGGAGGGCGCCCTG
CAGAGCCTGCCAAGGAGGACGCGGCGGAGCGGCGGGTTCGAGCGGTTCAGCAAGATCGTG
GGTGTCATCGTGAGCGCCATAATCGCCGTCATCTTCGGGAATCCGATGGGGTTGATCGCC
GCGGTGGCCGGCCCTGACGGTCTTCTCCGCGGGTAGAAGACGAGTGGAAAACAGTGTGCT
GCTAATTAGCAACAGTCAACGAGTGCGTCACGTGTAGAGTGTTCTTCTCTATGATTTTTT
TTTCTTCGTATAAACCCGAATGTTTTATTTTTAATCTTGTGGTGGGTTTGGAATATTTTG
AACAAAGATTGG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)