cluster # 3000

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Oryza sativa
cluster # 3000 cluster # 3000 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3000#0 length = 1710 sequences # 2
consensusID : consensus_3000#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1710
fasta sequence
                              [TGTTCCTAATTCCTTCCCTGCAATTATTGGTTGCTGCTTCACTTGATCTTATTGGCAACCAGCTAGCTAAGCTTATACACACCCACGGCCAGACCTGAACCTTCTACCTACTACCGCACAAAAACAACAAGCTACCTAGCTCTCTAACAACAATCTCATTTGCATGAATCGCAGGAGATCGATAGTAGCTACTAGTTAGCAAGTTCATATATAGATCGATCTATGATCGATGCTAGCTAGCTAATAGTATCATCGATCGGGAAAACAGACACAAATTAGAGCTAGCTAGAGCCCCCGCCGGCCGGGTCGACGTACTGCTGCTAATCAATAGCCAGCACAAGACGTGGGAATTGATTAAGGCGCATGCAGGCAGGGCGGAGTTAATAATTAATGGAGGAGCACGACTACGACTCCAACTCGAACCCGCCGTTGATGAGCACGTACAAGCACCTGTTCGTGGAGCAGCACCGCCTGGACATGGACATGGGCGCCATCGACGTCGACGAGTGCGAGCTCCCTGTGATCGACCTCGCGGGGCTCATGGAGGCGGAGCAGGTGTGCCGCGCAGACATGGTGCGTGCGGCGTCGGAATGGGGCTTCTTCCAGGTGACCAACCACGGCGTGCCGCAGGCGCTGCTGCGCGAGCTGCACGACGCACAGGTGGCCGTGTTCCGGCGGCCCTTCCAGGAGAAGGTGACCGAGAGGCTGCTCGGCTTCTCGCCGGAGAGCTACCGGTGGGGAACGCCGACGGCCAAGTGCCTGGAGCAGCTGTCGTGGTCGGAGGCCTATCACATCCCAATGACGACGCCCAGGCCCAGCACGAGCATCAGGGCCAGGGCGGTGATCGAGGAGGTGTCGAGGGCGATGTACGAGCTGGCGCAGAAGCTGGCAGAGATCCTGATGAGAGGGCTGCCGGGCGCCGGCGAGGGCGAGACGATGGTGACGACGCGGGAGGAGACGTGCTTCCTGCGGCTGAACCGGTACCCACCGTGCGCCATGGCCATGGGGGGCTTCGGGCTGTGCCCGCACACGGACAGCGACTTGCTCACCATCGTGCACCAGCAGCAGGACACCGTCGGCGGCCTCCAGCTGCTCAAGGGCGGCAGGTGGGTGGCCGTGAAGCCCAGCCCCAGCACCCTCATCGTCAACGTCAGCGACCTCCTGCAGGCGTGGAGCAACGATGTGTACAAGAGCGTGGAGCACAGGGTGATGGCCAACGCCACGCTGGAGCGCTTCTCCATGGCCTTCTTCCTCTGCCCCTCCTACCACACGCTCATCATCCCAAGCAGCAGCCATGTCCACGACGACGATGCCCATTACCGGAGCTTCACCTTCGGCGAGTACAGGAAGCAGATCATGGAGGACGTCAGGAGCACAGGCCGCAAGATTGGACTGCACCGCTTTCGAACCCGATAGATAGATCCACCTGACCTACATACCCGCCCTACTCCTACTATATATATCAAATCACCACTGCTATAATGCATTATACTCGATCCACTATGCATTTTTCATCGCCACAATATGCATGTACCTAGCCAATAATTAATTAAGCTGCACTTTGCTTACTTATTGCTAGCTTGCTACTGCATCGATCTATATGCATGTACACACATTTCATTGCCTTAGCAGTGTATGTATATGCATTATTTTTTCCTTATTTGCCCTTAGCTTGCAGATTTCATAGCAGCTAATATATATCCGTCGGAA]

[+] EMBL AK106859             [TGTTCCTAATTCCTTCCCTGCAATTATTGGTTGCTGCTTCACTTGATCTTATTGGCAACCAGCTAGCTAAGCTTATACACACCCACGGCCAGACCTGAACCTTCTACCTACTACCGCACAAAAACAACAAGCTACCTAGCTCTCTAACAACAATCTCATTTGCATGAATCGCAGGAGATCGATAGTAGCTACTAGTTAGCAAGTTCATATATAGATCGATCTATGATCGATGCTAGCTAGCTAATAGTATCATCGATCGGGAAAACAGACACAAATTAGAGCTAGCTAGAGCCCCCGCCGGCCGGGTCGACGTACTGCTGCTAATCAATAGCCAGCACAAGACGTGGGAATTGATTAAGGCGCATGCAGGCAGGGCGGAGTTAATAATTAATGGAGGAGCACGACTACGACTCCAACTCGAACCCGCCGTTGATGAGCACGTACAAGCACCTGTTCGTGGAGCAGCACCGCCTGGACATGGACATGGGCGCCATCGACGTCGACGAGTGCGAGCTCCCTGTGATCGACCTCGCGGGGCTCATGGAGGCGGAGCAGGTGTGCCGCGCAGACATGGTGCGTGCGGCGTCGGAATGGGGCTTCTTCCAGGTGACCAACCACGGCGTGCCGCAGGCGCTGCTGCGCGAGCTGCACGACGCACAGGTGGCCGTGTTCCGGCGGCCCTTCCAGGAGAAGGTGACCGAGAGGCTGCTCGGCTTCTCGCCGGAGAGCTACCGGTGGGGAACGCCGACGGCCAAGTGCCTGGAGCAGCTGTCGTGGTCGGAGGCCTATCACATCCCAATGACGACGCCCAGGCCCAGCACGAGCATCAGGGCCAGGGCGGTGATCGAGGAGGTGTCGAGGGCGATGTACGAGCTGGCGCAGAAGCTGGCAGAGATCCTGATGAGAGGGCTGCCGGGCGCCGGCGAGGGCGAGACGATGGTGACGACGCGGGAGGAGACGTGCTTCCTGCGGCTGAACCGGTACCCACCGTGCGCCATGGCCATGGGGGGCTTCGGGCTGTGCCCGCACACGGACAGCGACTTGCTCACCATCGTGCACCAGCAGCAGGACACCGTCGGCGGCCTCCAGCTGCTCAAGGGCGGCAGGTGGGTGGCCGTGAAGCCCAGCCCCAGCACCCTCATCGTCAACGTCAGCGACCTCCTGCAGGCGTGGAGCAACGATGTGTACAAGAGCGTGGAGCACAGGGTGATGGCCAACGCCACGCTGGAGCGCTTCTCCATGGCCTTCTTCCTCTGCCCCTCCTACCACACGCTCATCATCCCAAGCAGCAGCCATGTCCACGACGACGATGCCCATTACCGGAGCTTCACCTTCGGCGAGTACAGGAAGCAGATCATGGAGGACGTCAGGAGCACAGGCCGCAAGATTGGACTGCACCGCTTTCGAACCCGATAGATAGATCCACCTGACCTACATACCCGCCCTACTCCTACTATATATATCAAATCACCACTGCTATAATGCATTATACTCGATCCACTATGCATTTTTCATCGCCACAATATGCATGTACCTAGCCAATAATTAATTAAGCTGCACTTTGCTTACTTATTGCTAGCTTGCTACTGCATCGATCTATATGCATGTACACACATTTCATTGCCTTAGCAGTGTATGTATATGCATTATTTTTTCCTTATTTGCCCTTAGCTTGCAGATTTCATAGCAGCTAATATATATCCGTCGGAA]
[-] EMBL AK109056             [                                                                                                                                                                                                                                                                                                                                                                          CATGCAGGCAGGGCGGAGTTAATAATTAATGGAGGAGCACGACTACGACTCCAACTCGAACCCGCCGTTGATGAGCACGTACAAGCACCTGTTCGTGGAGCAGCACCGCCTGGACATGGACATGGGCGCCATCGACGTCGACGAGTGCGAGCTCCCTGTGATCGACCTCGCGGGGCTCATGGAGGCGGAGCAGGTGTGCCGCGCAGACATGGTGCGTGCGGCGTCGGAATGGGGCTTCTTCCAGGTGACCAACCACGGCGTGCCGCAGGCGCTGCTGCGCGAGCTGCACGACGCACAGGTGGCCGTGTTCCGGCGGCCCTTCCAGGAGAAGGTGACCGAGAGGCTGCTCGGCTTCTCGCCGGAGAGCTACCGGTGGGGAACGCCGGCGGCCAAGTGCCTGGAGCAGCTGTCGTGGTCGGAGGCCTATCACATCCCAATGACGACGCCCAGGCCCAGCACGAGCATCAGGGCCAGGGCGGTGATCGAGGAGGTGTCGAGGGCGATGTACGAGCTGGCGCAGAAGCTGGCAGAGATCCTGATGAGAGGGCTGCCGGGCGCCGGCGAGGGCGAGACGATGGTGACGACGCGGGAGGAGACGTGCTTCCTGCGGCTGAACCGGTACCCACCGTGCGCCATGGCCAT GGGGGCTTCGGGCTGTGCCCGCACACGGACAGCGACTTGCTCACCATCGTGCACCAGCAGCAGGACACCGTCGGCGGCCTCCAGCTGCTCAAGGGCGGCAGGTGGGTGGCCGTGAAGCCCAGCCCCAGCACCCTCATCGTCAACGTCGGCGACCTCCTGCAGGCGTGGAGCAACGATGTGTACAAGAGCGTGGAGCACAGGGTGATGGCCAACGCCACGCTGGAGCGCTTCTCCATGGCCTTCTTCCTCTGCCCCTCCTACCACACGCTCATCATCCCAAGCAGCAGCCGTGTCCACGACGACGATGCCCATTACCGGAGCTTCACCTTCGGCGAGTACAGGAAGCAGATCATGGAGGACGTCAGGAGCACAGGCCGCAAGATTGGACTGCACCGCTTTCGAACCCGATAGATAG                                                                                                                                                                                                                                                                                                  ]




>consensus_3000#0
TGTTCCTAATTCCTTCCCTGCAATTATTGGTTGCTGCTTCACTTGATCTTATTGGCAACC
AGCTAGCTAAGCTTATACACACCCACGGCCAGACCTGAACCTTCTACCTACTACCGCACA
AAAACAACAAGCTACCTAGCTCTCTAACAACAATCTCATTTGCATGAATCGCAGGAGATC
GATAGTAGCTACTAGTTAGCAAGTTCATATATAGATCGATCTATGATCGATGCTAGCTAG
CTAATAGTATCATCGATCGGGAAAACAGACACAAATTAGAGCTAGCTAGAGCCCCCGCCG
GCCGGGTCGACGTACTGCTGCTAATCAATAGCCAGCACAAGACGTGGGAATTGATTAAGG
CGCATGCAGGCAGGGCGGAGTTAATAATTAATGGAGGAGCACGACTACGACTCCAACTCG
AACCCGCCGTTGATGAGCACGTACAAGCACCTGTTCGTGGAGCAGCACCGCCTGGACATG
GACATGGGCGCCATCGACGTCGACGAGTGCGAGCTCCCTGTGATCGACCTCGCGGGGCTC
ATGGAGGCGGAGCAGGTGTGCCGCGCAGACATGGTGCGTGCGGCGTCGGAATGGGGCTTC
TTCCAGGTGACCAACCACGGCGTGCCGCAGGCGCTGCTGCGCGAGCTGCACGACGCACAG
GTGGCCGTGTTCCGGCGGCCCTTCCAGGAGAAGGTGACCGAGAGGCTGCTCGGCTTCTCG
CCGGAGAGCTACCGGTGGGGAACGCCGACGGCCAAGTGCCTGGAGCAGCTGTCGTGGTCG
GAGGCCTATCACATCCCAATGACGACGCCCAGGCCCAGCACGAGCATCAGGGCCAGGGCG
GTGATCGAGGAGGTGTCGAGGGCGATGTACGAGCTGGCGCAGAAGCTGGCAGAGATCCTG
ATGAGAGGGCTGCCGGGCGCCGGCGAGGGCGAGACGATGGTGACGACGCGGGAGGAGACG
TGCTTCCTGCGGCTGAACCGGTACCCACCGTGCGCCATGGCCATGGGGGGCTTCGGGCTG
TGCCCGCACACGGACAGCGACTTGCTCACCATCGTGCACCAGCAGCAGGACACCGTCGGC
GGCCTCCAGCTGCTCAAGGGCGGCAGGTGGGTGGCCGTGAAGCCCAGCCCCAGCACCCTC
ATCGTCAACGTCAGCGACCTCCTGCAGGCGTGGAGCAACGATGTGTACAAGAGCGTGGAG
CACAGGGTGATGGCCAACGCCACGCTGGAGCGCTTCTCCATGGCCTTCTTCCTCTGCCCC
TCCTACCACACGCTCATCATCCCAAGCAGCAGCCATGTCCACGACGACGATGCCCATTAC
CGGAGCTTCACCTTCGGCGAGTACAGGAAGCAGATCATGGAGGACGTCAGGAGCACAGGC
CGCAAGATTGGACTGCACCGCTTTCGAACCCGATAGATAGATCCACCTGACCTACATACC
CGCCCTACTCCTACTATATATATCAAATCACCACTGCTATAATGCATTATACTCGATCCA
CTATGCATTTTTCATCGCCACAATATGCATGTACCTAGCCAATAATTAATTAAGCTGCAC
TTTGCTTACTTATTGCTAGCTTGCTACTGCATCGATCTATATGCATGTACACACATTTCA
TTGCCTTAGCAGTGTATGTATATGCATTATTTTTTCCTTATTTGCCCTTAGCTTGCAGAT
TTCATAGCAGCTAATATATATCCGTCGGAA
clustalw multiple alignements is not computed in this case