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Oryza sativa
cluster # 3005 cluster # 3005       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3005#0 length = 1931 sequences # 1  
consensus_3005#1 length = 1848 sequences # 1  

consensusID : consensus_3005#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1931
fasta sequence
                              [TGGTGGGACGAACTCACATTCACATCGGAGTATCGGACGACCGCTCTACCTCTACCCATCGCGAAGGAGGAGATCAAGCTCAGTCTCGAGTATGGCCACGACTTCCGATATCGCCGGTCGCTCCTTCCGCTGCAGCTGCACGCAGCGCGCCGCCGTCCGCGCCACCATTTCCAACGCCTCGAGCTGCCTCGCCGTTGGCTCCGCCGGCCGCCTGTCCAGCAACCTCCCCAGCTCGCCGTCTTCAATGATTGGAAGCGAAAAGGCTACCAAGTTGGTGACCTCGCCCTCCTCCTTCCGATCGATGAAAATTGGCCTCTTGCCCGTGAGCATCTCCAGCATCACGACGCCGAAGCTGTTCACGTCGCTGCTCCGCGTCTGATTCATTGTGCTGTAGAACTCCGGGTCGATGTATCCGGCCGTGCCGTGCACGACGGTGCTCGGACGCTCCATGCCGTTGATCACCGCCGCGCCGAAGTCCGTCAAATGCGGCACCCAGCTCGAGTCGACGAGGATGTTGGACAGCTTGATGTCCCCGTGGATGATCGGCGTCGTGGTGGCGCCGTGGTGCAGGTACTGGATGCCCCGCGACACGCCGAGCAGCATCTTGATGCGCATCTTCCACGACGCCATCACCGGCGACGACGACGACGACGACGACAGGTGGCCATGCAGCTGATCGGCGAGTGAGCCATTCTCCATGTAATCGTAGACGAGAAGGAGCTCTCCAGCCTGCCTCTCCGCCGCCGCCTTCTTTTTCTTCCGGAAGGATAGCAGCAGCGTGCTCTCCCTCTTCTTCTCCCTTACCACGCAGAAGCCAAGGAGGCGGACGATGTGGTCATGGCGGAGACGGGAGAGAATGGCGAGCCCCCTCATGAGAGATTCCTCCCGGCCATGGTCCGGCGATGTCTTTACCAAGGATTTGATTGCCACCTCCCGCCCGTCGCGAAGCCTTCCCTTGTACACGCTGCCGGAGCTGCCTCTGCCGATCTCGTTGGCAAAGTTGTTGGTCGCCGCCACGAGCTCCTTCACGGTGAACTCCTCTCCTCCATCTCCTTGAGAAATCCGTGCAAACTCCTACACAGATGATGCTCGTTCTCACTTAGGAATTACTAGTAATCAATTAATCTCAACGCAATCGATGTAAAAAAAAAAAAAACAGCTTGTAGTACCAGCGCATCTGGTGACTGCAGGGAGCCTGCAGATGAAGGAGAAGATGCTGCGGTCGTATCATTTGAAACAAGAATGTTGTAGATTTGATCCGACTGTGAGCTGCCTGCAGATGAAGAAGATGATGCTGCGGCCGTATCGTTTGGAGCAAGAATTCTGTAGATCTGATCGAGGCGACGGGTGATGTCGATGTGGGCGATGAAAGGGAAGACAATGAGGTAGGAGTCGATCTTGCTCTGCACGTCCCTGAACCTGTCAGCCAGGCGCCCCGCCATGACGAACCGATATGCCGCGCTCCGGCCTTGGCAGGAGGCCACGAGCTCGTGAGCCTCCCGGAGCGTGTCGCCGAGCTCCGCCAGCGGCCGCCGGACCTCCGGCCGCCGCATCACCTCCGGGTCCTGCAGGTGGGGCAGCAGGTCGGCGATCATGACGACGCGGCGGGCGAGCTGGTCGCACTCCCTCTTGTTCTGCCGAGCCGTCGCTGCCGCTTGGATGATGCTGGAGATGAGCCCGCCGACGTCCGCGCCGACCAGCTGCGCCACCGTCGCCGCCTGCCCCAACCCACCCCACACAGCCATGGATTACGTTAGAGGTCGAAACTCGATAAATCAAAGGGGAGATGGAGAGGTTTAATCATCTCTCTGTCAAGTCTTTTGGCTTAAATCTTCTTTATGATCGAGTGGTTTGCTTATTTGACCAACCATATTATTATATGATGGAATCATGGATTGATGGAAGTACCTTCGGCGAAATAAAGCATGTCT]

[+] EMBL AK109679             [TGGTGGGACGAACTCACATTCACATCGGAGTATCGGACGACCGCTCTACCTCTACCCATCGCGAAGGAGGAGATCAAGCTCAGTCTCGAGTATGGCCACGACTTCCGATATCGCCGGTCGCTCCTTCCGCTGCAGCTGCACGCAGCGCGCCGCCGTCCGCGCCACCATTTCCAACGCCTCGAGCTGCCTCGCCGTTGGCTCCGCCGGCCGCCTGTCCAGCAACCTCCCCAGCTCGCCGTCTTCAATGATTGGAAGCGAAAAGGCTACCAAGTTGGTGACCTCGCCCTCCTCCTTCCGATCGATGAAAATTGGCCTCTTGCCCGTGAGCATCTCCAGCATCACGACGCCGAAGCTGTTCACGTCGCTGCTCCGCGTCTGATTCATTGTGCTGTAGAACTCCGGGTCGATGTATCCGGCCGTGCCGTGCACGACGGTGCTCGGACGCTCCATGCCGTTGATCACCGCCGCGCCGAAGTCCGTCAAATGCGGCACCCAGCTCGAGTCGACGAGGATGTTGGACAGCTTGATGTCCCCGTGGATGATCGGCGTCGTGGTGGCGCCGTGGTGCAGGTACTGGATGCCCCGCGACACGCCGAGCAGCATCTTGATGCGCATCTTCCACGACGCCATCACCGGCGACGACGACGACGACGACGACAGGTGGCCATGCAGCTGATCGGCGAGTGAGCCATTCTCCATGTAATCGTAGACGAGAAGGAGCTCTCCAGCCTGCCTCTCCGCCGCCGCCTTCTTTTTCTTCCGGAAGGATAGCAGCAGCGTGCTCTCCCTCTTCTTCTCCCTTACCACGCAGAAGCCAAGGAGGCGGACGATGTGGTCATGGCGGAGACGGGAGAGAATGGCGAGCCCCCTCATGAGAGATTCCTCCCGGCCATGGTCCGGCGATGTCTTTACCAAGGATTTGATTGCCACCTCCCGCCCGTCGCGAAGCCTTCCCTTGTACACGCTGCCGGAGCTGCCTCTGCCGATCTCGTTGGCAAAGTTGTTGGTCGCCGCCACGAGCTCCTTCACGGTGAACTCCTCTCCTCCATCTCCTTGAGAAATCCGTGCAAACTCCTACACAGATGATGCTCGTTCTCACTTAGGAATTACTAGTAATCAATTAATCTCAACGCAATCGATGTAAAAAAAAAAAAAACAGCTTGTAGTACCAGCGCATCTGGTGACTGCAGGGAGCCTGCAGATGAAGGAGAAGATGCTGCGGTCGTATCATTTGAAACAAGAATGTTGTAGATTTGATCCGACTGTGAGCTGCCTGCAGATGAAGAAGATGATGCTGCGGCCGTATCGTTTGGAGCAAGAATTCTGTAGATCTGATCGAGGCGACGGGTGATGTCGATGTGGGCGATGAAAGGGAAGACAATGAGGTAGGAGTCGATCTTGCTCTGCACGTCCCTGAACCTGTCAGCCAGGCGCCCCGCCATGACGAACCGATATGCCGCGCTCCGGCCTTGGCAGGAGGCCACGAGCTCGTGAGCCTCCCGGAGCGTGTCGCCGAGCTCCGCCAGCGGCCGCCGGACCTCCGGCCGCCGCATCACCTCCGGGTCCTGCAGGTGGGGCAGCAGGTCGGCGATCATGACGACGCGGCGGGCGAGCTGGTCGCACTCCCTCTTGTTCTGCCGAGCCGTCGCTGCCGCTTGGATGATGCTGGAGATGAGCCCGCCGACGTCCGCGCCGACCAGCTGCGCCACCGTCGCCGCCTGCCCCAACCCACCCCACACAGCCATGGATTACGTTAGAGGTCGAAACTCGATAAATCAAAGGGGAGATGGAGAGGTTTAATCATCTCTCTGTCAAGTCTTTTGGCTTAAATCTTCTTTATGATCGAGTGGTTTGCTTATTTGACCAACCATATTATTATATGATGGAATCATGGATTGATGGAAGTACCTTCGGCGAAATAAAGCATGTCT]


>consensus_3005#0 TGGTGGGACGAACTCACATTCACATCGGAGTATCGGACGACCGCTCTACCTCTACCCATC GCGAAGGAGGAGATCAAGCTCAGTCTCGAGTATGGCCACGACTTCCGATATCGCCGGTCG CTCCTTCCGCTGCAGCTGCACGCAGCGCGCCGCCGTCCGCGCCACCATTTCCAACGCCTC GAGCTGCCTCGCCGTTGGCTCCGCCGGCCGCCTGTCCAGCAACCTCCCCAGCTCGCCGTC TTCAATGATTGGAAGCGAAAAGGCTACCAAGTTGGTGACCTCGCCCTCCTCCTTCCGATC GATGAAAATTGGCCTCTTGCCCGTGAGCATCTCCAGCATCACGACGCCGAAGCTGTTCAC GTCGCTGCTCCGCGTCTGATTCATTGTGCTGTAGAACTCCGGGTCGATGTATCCGGCCGT GCCGTGCACGACGGTGCTCGGACGCTCCATGCCGTTGATCACCGCCGCGCCGAAGTCCGT CAAATGCGGCACCCAGCTCGAGTCGACGAGGATGTTGGACAGCTTGATGTCCCCGTGGAT GATCGGCGTCGTGGTGGCGCCGTGGTGCAGGTACTGGATGCCCCGCGACACGCCGAGCAG CATCTTGATGCGCATCTTCCACGACGCCATCACCGGCGACGACGACGACGACGACGACAG GTGGCCATGCAGCTGATCGGCGAGTGAGCCATTCTCCATGTAATCGTAGACGAGAAGGAG CTCTCCAGCCTGCCTCTCCGCCGCCGCCTTCTTTTTCTTCCGGAAGGATAGCAGCAGCGT GCTCTCCCTCTTCTTCTCCCTTACCACGCAGAAGCCAAGGAGGCGGACGATGTGGTCATG GCGGAGACGGGAGAGAATGGCGAGCCCCCTCATGAGAGATTCCTCCCGGCCATGGTCCGG CGATGTCTTTACCAAGGATTTGATTGCCACCTCCCGCCCGTCGCGAAGCCTTCCCTTGTA CACGCTGCCGGAGCTGCCTCTGCCGATCTCGTTGGCAAAGTTGTTGGTCGCCGCCACGAG CTCCTTCACGGTGAACTCCTCTCCTCCATCTCCTTGAGAAATCCGTGCAAACTCCTACAC AGATGATGCTCGTTCTCACTTAGGAATTACTAGTAATCAATTAATCTCAACGCAATCGAT GTAAAAAAAAAAAAAACAGCTTGTAGTACCAGCGCATCTGGTGACTGCAGGGAGCCTGCA GATGAAGGAGAAGATGCTGCGGTCGTATCATTTGAAACAAGAATGTTGTAGATTTGATCC GACTGTGAGCTGCCTGCAGATGAAGAAGATGATGCTGCGGCCGTATCGTTTGGAGCAAGA ATTCTGTAGATCTGATCGAGGCGACGGGTGATGTCGATGTGGGCGATGAAAGGGAAGACA ATGAGGTAGGAGTCGATCTTGCTCTGCACGTCCCTGAACCTGTCAGCCAGGCGCCCCGCC ATGACGAACCGATATGCCGCGCTCCGGCCTTGGCAGGAGGCCACGAGCTCGTGAGCCTCC CGGAGCGTGTCGCCGAGCTCCGCCAGCGGCCGCCGGACCTCCGGCCGCCGCATCACCTCC GGGTCCTGCAGGTGGGGCAGCAGGTCGGCGATCATGACGACGCGGCGGGCGAGCTGGTCG CACTCCCTCTTGTTCTGCCGAGCCGTCGCTGCCGCTTGGATGATGCTGGAGATGAGCCCG CCGACGTCCGCGCCGACCAGCTGCGCCACCGTCGCCGCCTGCCCCAACCCACCCCACACA GCCATGGATTACGTTAGAGGTCGAAACTCGATAAATCAAAGGGGAGATGGAGAGGTTTAA TCATCTCTCTGTCAAGTCTTTTGGCTTAAATCTTCTTTATGATCGAGTGGTTTGCTTATT TGACCAACCATATTATTATATGATGGAATCATGGATTGATGGAAGTACCTTCGGCGAAAT AAAGCATGTCT



consensusID : consensus_3005#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1848
fasta sequence
                              [TCACATACAATTTTTTTTCTCCATGAAAATAGGAGAAACAGGTAAATTTCCTTTACATCGTTTTACATGACGTCTGAAACTCAAGTTAAAGAAGCATACATTCATACATGTCTTCCTTGAAAAGCATCTTACTGAAGCTATGTTTGACGATTGGAATTCTGAAGCTATTTTTTCCGTTGGAATTTGGATGCAGCAAATGGTGGGACGAACTCACATTCACATCGGAGTATCGGACGACCGCTCTACCTCTACCCATCGCGAAGGAGGAGATCAAGCTCAGTCTCGAGTATGGCCACGACTTCCGATATCGCCGGTCGCTCCTTCCGCTGCAGCTGCACGCAGCGCGCCGCCGTCCGCGCCACCATTTCCAACGCCTCGAGCTGCCTCGCCGTTGGCTCCGCCGGCCGCCTGTCCAGCAACCTCCCCAGCTCGCCGTCTTCAATGATTGGAAGCGAAAAGGCTACCAAGTTGGTGACCTCGCCCTCCTCCTTCCGATCGATGAAAATTGGCCTCTTGCCCGTGAGCATCTCCAGCATCACGACGCCGAAGCTGTTCACGTCGCTGCTCCGCGTCTGATTCATTGTGCTGTAGAACTCCGGGTCGATGCATCCGGCCGTGCCGTGCACGACGGTGCTCGGACGCTCCATGCCGTTGATCACCGCCGCGCCGAAGTCCGTCAAATGCGGCACCCAGCTCGAGTCGACGAGGATGTTGGACAGCTTGATGTCCCCGTGGATGATCGGCGTCGTGGTGGCGCCGTGGTGCAGGTACTGGATGCCCCGCGACACGCCGAGCAGCATCTTGATGCGCATCTTCCACGACGCCATCACCGGCGACGACGACGACGACGACGACAGGTGGCCATGCAGCTGATCGGCGAGTGAGCCATTCTCCATGTAATCGTAGACGAGAAGGAGCTCTCCAGCCTGCCTCTCCGCCGCCGCCTTCTTTTTCTTCCGGAAGGATAGCAGCAGCGTGCTCTCCCTCTTCTTCTCCCTTACCACGCAGAAGCCAAGGAGGCGGACGATGTGGTCATGGCGGAGACGGGAGAGAATGGCGAGCCCCCTCATGAGAGATTCCTCCCGGCCATGGTCCGGCGATGTCTTTACCAAGGATTTGATTGCCACCTCCCGCCCGTCGCGAAGCCTTCCCTTGTACACGCTGCCGGAGCTGCCTCTGCCGATCTCGTTGGCAAAGTTGTTGGTCGCCGCCACGAGCTCCTTCACGGTGAACTCCTCTCCTCCATCTCCTTGAGAAATCCGTGCAAACTCCAGCGCATCTGGTGACTGCAGGGAGCCTGCAGATGAAGGAGAAGATGCTGCGGTCGTATCATTTGAAACAAGAATGTTGTAGATTTGATCCGACTGTGAGCTGCCTGCAGATGAAGAAGATGATGCTGCGGCCGTATCGTTTGGAGCAAGAATTCTGTAGATCTGATCGAGGCGACGGGTGATGTCGATGTGGGCGATGAAAGGGAAGACAATGAGGTAGGAGTCGATCTTGCTCTGCACGTCCCTGAACCTGTCAGCCAGGCGCCCCGCCATGACGAACCGATATGCCGCGCTCCGACCTTGGCAGGAGGCCACGAGCTCGTGAGCCTCCCGGAGCGTGTCGCCGAGCTCCGCCAGCGGCCGCCGGACCTCCGGCCGCCGCATCACCTCCGGGTCCTGCAGGTGGGGCAGCAGGTCGGCGATCATGACGACGCGGCGGGCGAGCTGGTCGCACTCCCTCTTGTTCTGCCGAGCCGTCGCTGCCGCTTGGATGATGCTGGAGATGAGCCCGCCGACGTCCGCGCCGACCAGCTGCGCCACCGTCGCCGCCTGCCCCAACCCACCCCACACAGCCATG]

[-] EMBL AK106925             [TCACATACAATTTTTTTTCTCCATGAAAATAGGAGAAACAGGTAAATTTCCTTTACATCGTTTTACATGACGTCTGAAACTCAAGTTAAAGAAGCATACATTCATACATGTCTTCCTTGAAAAGCATCTTACTGAAGCTATGTTTGACGATTGGAATTCTGAAGCTATTTTTTCCGTTGGAATTTGGATGCAGCAAATGGTGGGACGAACTCACATTCACATCGGAGTATCGGACGACCGCTCTACCTCTACCCATCGCGAAGGAGGAGATCAAGCTCAGTCTCGAGTATGGCCACGACTTCCGATATCGCCGGTCGCTCCTTCCGCTGCAGCTGCACGCAGCGCGCCGCCGTCCGCGCCACCATTTCCAACGCCTCGAGCTGCCTCGCCGTTGGCTCCGCCGGCCGCCTGTCCAGCAACCTCCCCAGCTCGCCGTCTTCAATGATTGGAAGCGAAAAGGCTACCAAGTTGGTGACCTCGCCCTCCTCCTTCCGATCGATGAAAATTGGCCTCTTGCCCGTGAGCATCTCCAGCATCACGACGCCGAAGCTGTTCACGTCGCTGCTCCGCGTCTGATTCATTGTGCTGTAGAACTCCGGGTCGATGCATCCGGCCGTGCCGTGCACGACGGTGCTCGGACGCTCCATGCCGTTGATCACCGCCGCGCCGAAGTCCGTCAAATGCGGCACCCAGCTCGAGTCGACGAGGATGTTGGACAGCTTGATGTCCCCGTGGATGATCGGCGTCGTGGTGGCGCCGTGGTGCAGGTACTGGATGCCCCGCGACACGCCGAGCAGCATCTTGATGCGCATCTTCCACGACGCCATCACCGGCGACGACGACGACGACGACGACAGGTGGCCATGCAGCTGATCGGCGAGTGAGCCATTCTCCATGTAATCGTAGACGAGAAGGAGCTCTCCAGCCTGCCTCTCCGCCGCCGCCTTCTTTTTCTTCCGGAAGGATAGCAGCAGCGTGCTCTCCCTCTTCTTCTCCCTTACCACGCAGAAGCCAAGGAGGCGGACGATGTGGTCATGGCGGAGACGGGAGAGAATGGCGAGCCCCCTCATGAGAGATTCCTCCCGGCCATGGTCCGGCGATGTCTTTACCAAGGATTTGATTGCCACCTCCCGCCCGTCGCGAAGCCTTCCCTTGTACACGCTGCCGGAGCTGCCTCTGCCGATCTCGTTGGCAAAGTTGTTGGTCGCCGCCACGAGCTCCTTCACGGTGAACTCCTCTCCTCCATCTCCTTGAGAAATCCGTGCAAACTCCAGCGCATCTGGTGACTGCAGGGAGCCTGCAGATGAAGGAGAAGATGCTGCGGTCGTATCATTTGAAACAAGAATGTTGTAGATTTGATCCGACTGTGAGCTGCCTGCAGATGAAGAAGATGATGCTGCGGCCGTATCGTTTGGAGCAAGAATTCTGTAGATCTGATCGAGGCGACGGGTGATGTCGATGTGGGCGATGAAAGGGAAGACAATGAGGTAGGAGTCGATCTTGCTCTGCACGTCCCTGAACCTGTCAGCCAGGCGCCCCGCCATGACGAACCGATATGCCGCGCTCCGACCTTGGCAGGAGGCCACGAGCTCGTGAGCCTCCCGGAGCGTGTCGCCGAGCTCCGCCAGCGGCCGCCGGACCTCCGGCCGCCGCATCACCTCCGGGTCCTGCAGGTGGGGCAGCAGGTCGGCGATCATGACGACGCGGCGGGCGAGCTGGTCGCACTCCCTCTTGTTCTGCCGAGCCGTCGCTGCCGCTTGGATGATGCTGGAGATGAGCCCGCCGACGTCCGCGCCGACCAGCTGCGCCACCGTCGCCGCCTGCCCCAACCCACCCCACACAGCCATG]


>consensus_3005#1 TCACATACAATTTTTTTTCTCCATGAAAATAGGAGAAACAGGTAAATTTCCTTTACATCG TTTTACATGACGTCTGAAACTCAAGTTAAAGAAGCATACATTCATACATGTCTTCCTTGA AAAGCATCTTACTGAAGCTATGTTTGACGATTGGAATTCTGAAGCTATTTTTTCCGTTGG AATTTGGATGCAGCAAATGGTGGGACGAACTCACATTCACATCGGAGTATCGGACGACCG CTCTACCTCTACCCATCGCGAAGGAGGAGATCAAGCTCAGTCTCGAGTATGGCCACGACT TCCGATATCGCCGGTCGCTCCTTCCGCTGCAGCTGCACGCAGCGCGCCGCCGTCCGCGCC ACCATTTCCAACGCCTCGAGCTGCCTCGCCGTTGGCTCCGCCGGCCGCCTGTCCAGCAAC CTCCCCAGCTCGCCGTCTTCAATGATTGGAAGCGAAAAGGCTACCAAGTTGGTGACCTCG CCCTCCTCCTTCCGATCGATGAAAATTGGCCTCTTGCCCGTGAGCATCTCCAGCATCACG ACGCCGAAGCTGTTCACGTCGCTGCTCCGCGTCTGATTCATTGTGCTGTAGAACTCCGGG TCGATGCATCCGGCCGTGCCGTGCACGACGGTGCTCGGACGCTCCATGCCGTTGATCACC GCCGCGCCGAAGTCCGTCAAATGCGGCACCCAGCTCGAGTCGACGAGGATGTTGGACAGC TTGATGTCCCCGTGGATGATCGGCGTCGTGGTGGCGCCGTGGTGCAGGTACTGGATGCCC CGCGACACGCCGAGCAGCATCTTGATGCGCATCTTCCACGACGCCATCACCGGCGACGAC GACGACGACGACGACAGGTGGCCATGCAGCTGATCGGCGAGTGAGCCATTCTCCATGTAA TCGTAGACGAGAAGGAGCTCTCCAGCCTGCCTCTCCGCCGCCGCCTTCTTTTTCTTCCGG AAGGATAGCAGCAGCGTGCTCTCCCTCTTCTTCTCCCTTACCACGCAGAAGCCAAGGAGG CGGACGATGTGGTCATGGCGGAGACGGGAGAGAATGGCGAGCCCCCTCATGAGAGATTCC TCCCGGCCATGGTCCGGCGATGTCTTTACCAAGGATTTGATTGCCACCTCCCGCCCGTCG CGAAGCCTTCCCTTGTACACGCTGCCGGAGCTGCCTCTGCCGATCTCGTTGGCAAAGTTG TTGGTCGCCGCCACGAGCTCCTTCACGGTGAACTCCTCTCCTCCATCTCCTTGAGAAATC CGTGCAAACTCCAGCGCATCTGGTGACTGCAGGGAGCCTGCAGATGAAGGAGAAGATGCT GCGGTCGTATCATTTGAAACAAGAATGTTGTAGATTTGATCCGACTGTGAGCTGCCTGCA GATGAAGAAGATGATGCTGCGGCCGTATCGTTTGGAGCAAGAATTCTGTAGATCTGATCG AGGCGACGGGTGATGTCGATGTGGGCGATGAAAGGGAAGACAATGAGGTAGGAGTCGATC TTGCTCTGCACGTCCCTGAACCTGTCAGCCAGGCGCCCCGCCATGACGAACCGATATGCC GCGCTCCGACCTTGGCAGGAGGCCACGAGCTCGTGAGCCTCCCGGAGCGTGTCGCCGAGC TCCGCCAGCGGCCGCCGGACCTCCGGCCGCCGCATCACCTCCGGGTCCTGCAGGTGGGGC AGCAGGTCGGCGATCATGACGACGCGGCGGGCGAGCTGGTCGCACTCCCTCTTGTTCTGC CGAGCCGTCGCTGCCGCTTGGATGATGCTGGAGATGAGCCCGCCGACGTCCGCGCCGACC AGCTGCGCCACCGTCGCCGCCTGCCCCAACCCACCCCACACAGCCATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3005#0      ------------------------------------------------------------
consensus_3005#1      TCACATACAATTTTTTTTCTCCATGAAAATAGGAGAAACAGGTAAATTTCCTTTACATCG 60
                                                                                  

consensus_3005#0      ------------------------------------------------------------
consensus_3005#1      TTTTACATGACGTCTGAAACTCAAGTTAAAGAAGCATACATTCATACATGTCTTCCTTGA 120
                                                                                  

consensus_3005#0      ------------------------------------------------------------
consensus_3005#1      AAAGCATCTTACTGAAGCTATGTTTGACGATTGGAATTCTGAAGCTATTTTTTCCGTTGG 180
                                                                                  

consensus_3005#0      -----------------TGGTGGGACGAACTCACATTCACATCGGAGTATCGGACGACCG 43
consensus_3005#1      AATTTGGATGCAGCAAATGGTGGGACGAACTCACATTCACATCGGAGTATCGGACGACCG 240
                                       *******************************************

consensus_3005#0      CTCTACCTCTACCCATCGCGAAGGAGGAGATCAAGCTCAGTCTCGAGTATGGCCACGACT 103
consensus_3005#1      CTCTACCTCTACCCATCGCGAAGGAGGAGATCAAGCTCAGTCTCGAGTATGGCCACGACT 300
                      ************************************************************

consensus_3005#0      TCCGATATCGCCGGTCGCTCCTTCCGCTGCAGCTGCACGCAGCGCGCCGCCGTCCGCGCC 163
consensus_3005#1      TCCGATATCGCCGGTCGCTCCTTCCGCTGCAGCTGCACGCAGCGCGCCGCCGTCCGCGCC 360
                      ************************************************************

consensus_3005#0      ACCATTTCCAACGCCTCGAGCTGCCTCGCCGTTGGCTCCGCCGGCCGCCTGTCCAGCAAC 223
consensus_3005#1      ACCATTTCCAACGCCTCGAGCTGCCTCGCCGTTGGCTCCGCCGGCCGCCTGTCCAGCAAC 420
                      ************************************************************

consensus_3005#0      CTCCCCAGCTCGCCGTCTTCAATGATTGGAAGCGAAAAGGCTACCAAGTTGGTGACCTCG 283
consensus_3005#1      CTCCCCAGCTCGCCGTCTTCAATGATTGGAAGCGAAAAGGCTACCAAGTTGGTGACCTCG 480
                      ************************************************************

consensus_3005#0      CCCTCCTCCTTCCGATCGATGAAAATTGGCCTCTTGCCCGTGAGCATCTCCAGCATCACG 343
consensus_3005#1      CCCTCCTCCTTCCGATCGATGAAAATTGGCCTCTTGCCCGTGAGCATCTCCAGCATCACG 540
                      ************************************************************

consensus_3005#0      ACGCCGAAGCTGTTCACGTCGCTGCTCCGCGTCTGATTCATTGTGCTGTAGAACTCCGGG 403
consensus_3005#1      ACGCCGAAGCTGTTCACGTCGCTGCTCCGCGTCTGATTCATTGTGCTGTAGAACTCCGGG 600
                      ************************************************************

consensus_3005#0      TCGATGTATCCGGCCGTGCCGTGCACGACGGTGCTCGGACGCTCCATGCCGTTGATCACC 463
consensus_3005#1      TCGATGCATCCGGCCGTGCCGTGCACGACGGTGCTCGGACGCTCCATGCCGTTGATCACC 660
                      ****** *****************************************************

consensus_3005#0      GCCGCGCCGAAGTCCGTCAAATGCGGCACCCAGCTCGAGTCGACGAGGATGTTGGACAGC 523
consensus_3005#1      GCCGCGCCGAAGTCCGTCAAATGCGGCACCCAGCTCGAGTCGACGAGGATGTTGGACAGC 720
                      ************************************************************

consensus_3005#0      TTGATGTCCCCGTGGATGATCGGCGTCGTGGTGGCGCCGTGGTGCAGGTACTGGATGCCC 583
consensus_3005#1      TTGATGTCCCCGTGGATGATCGGCGTCGTGGTGGCGCCGTGGTGCAGGTACTGGATGCCC 780
                      ************************************************************

consensus_3005#0      CGCGACACGCCGAGCAGCATCTTGATGCGCATCTTCCACGACGCCATCACCGGCGACGAC 643
consensus_3005#1      CGCGACACGCCGAGCAGCATCTTGATGCGCATCTTCCACGACGCCATCACCGGCGACGAC 840
                      ************************************************************

consensus_3005#0      GACGACGACGACGACAGGTGGCCATGCAGCTGATCGGCGAGTGAGCCATTCTCCATGTAA 703
consensus_3005#1      GACGACGACGACGACAGGTGGCCATGCAGCTGATCGGCGAGTGAGCCATTCTCCATGTAA 900
                      ************************************************************

consensus_3005#0      TCGTAGACGAGAAGGAGCTCTCCAGCCTGCCTCTCCGCCGCCGCCTTCTTTTTCTTCCGG 763
consensus_3005#1      TCGTAGACGAGAAGGAGCTCTCCAGCCTGCCTCTCCGCCGCCGCCTTCTTTTTCTTCCGG 960
                      ************************************************************

consensus_3005#0      AAGGATAGCAGCAGCGTGCTCTCCCTCTTCTTCTCCCTTACCACGCAGAAGCCAAGGAGG 823
consensus_3005#1      AAGGATAGCAGCAGCGTGCTCTCCCTCTTCTTCTCCCTTACCACGCAGAAGCCAAGGAGG 1020
                      ************************************************************

consensus_3005#0      CGGACGATGTGGTCATGGCGGAGACGGGAGAGAATGGCGAGCCCCCTCATGAGAGATTCC 883
consensus_3005#1      CGGACGATGTGGTCATGGCGGAGACGGGAGAGAATGGCGAGCCCCCTCATGAGAGATTCC 1080
                      ************************************************************

consensus_3005#0      TCCCGGCCATGGTCCGGCGATGTCTTTACCAAGGATTTGATTGCCACCTCCCGCCCGTCG 943
consensus_3005#1      TCCCGGCCATGGTCCGGCGATGTCTTTACCAAGGATTTGATTGCCACCTCCCGCCCGTCG 1140
                      ************************************************************

consensus_3005#0      CGAAGCCTTCCCTTGTACACGCTGCCGGAGCTGCCTCTGCCGATCTCGTTGGCAAAGTTG 1003
consensus_3005#1      CGAAGCCTTCCCTTGTACACGCTGCCGGAGCTGCCTCTGCCGATCTCGTTGGCAAAGTTG 1200
                      ************************************************************

consensus_3005#0      TTGGTCGCCGCCACGAGCTCCTTCACGGTGAACTCCTCTCCTCCATCTCCTTGAGAAATC 1063
consensus_3005#1      TTGGTCGCCGCCACGAGCTCCTTCACGGTGAACTCCTCTCCTCCATCTCCTTGAGAAATC 1260
                      ************************************************************

consensus_3005#0      CGTGCAAACTCCTACACAGATGATGCTCGTTCTCACTTAGGAATTACTAGTAATCAATTA 1123
consensus_3005#1      CGTGCAAACTCC------------------------------------------------ 1272
                      ************                                                

consensus_3005#0      ATCTCAACGCAATCGATGTAAAAAAAAAAAAAACAGCTTGTAGTACCAGCGCATCTGGTG 1183
consensus_3005#1      -----------------------------------------------AGCGCATCTGGTG 1285
                                                                     *************

consensus_3005#0      ACTGCAGGGAGCCTGCAGATGAAGGAGAAGATGCTGCGGTCGTATCATTTGAAACAAGAA 1243
consensus_3005#1      ACTGCAGGGAGCCTGCAGATGAAGGAGAAGATGCTGCGGTCGTATCATTTGAAACAAGAA 1345
                      ************************************************************

consensus_3005#0      TGTTGTAGATTTGATCCGACTGTGAGCTGCCTGCAGATGAAGAAGATGATGCTGCGGCCG 1303
consensus_3005#1      TGTTGTAGATTTGATCCGACTGTGAGCTGCCTGCAGATGAAGAAGATGATGCTGCGGCCG 1405
                      ************************************************************

consensus_3005#0      TATCGTTTGGAGCAAGAATTCTGTAGATCTGATCGAGGCGACGGGTGATGTCGATGTGGG 1363
consensus_3005#1      TATCGTTTGGAGCAAGAATTCTGTAGATCTGATCGAGGCGACGGGTGATGTCGATGTGGG 1465
                      ************************************************************

consensus_3005#0      CGATGAAAGGGAAGACAATGAGGTAGGAGTCGATCTTGCTCTGCACGTCCCTGAACCTGT 1423
consensus_3005#1      CGATGAAAGGGAAGACAATGAGGTAGGAGTCGATCTTGCTCTGCACGTCCCTGAACCTGT 1525
                      ************************************************************

consensus_3005#0      CAGCCAGGCGCCCCGCCATGACGAACCGATATGCCGCGCTCCGGCCTTGGCAGGAGGCCA 1483
consensus_3005#1      CAGCCAGGCGCCCCGCCATGACGAACCGATATGCCGCGCTCCGACCTTGGCAGGAGGCCA 1585
                      ******************************************* ****************

consensus_3005#0      CGAGCTCGTGAGCCTCCCGGAGCGTGTCGCCGAGCTCCGCCAGCGGCCGCCGGACCTCCG 1543
consensus_3005#1      CGAGCTCGTGAGCCTCCCGGAGCGTGTCGCCGAGCTCCGCCAGCGGCCGCCGGACCTCCG 1645
                      ************************************************************

consensus_3005#0      GCCGCCGCATCACCTCCGGGTCCTGCAGGTGGGGCAGCAGGTCGGCGATCATGACGACGC 1603
consensus_3005#1      GCCGCCGCATCACCTCCGGGTCCTGCAGGTGGGGCAGCAGGTCGGCGATCATGACGACGC 1705
                      ************************************************************

consensus_3005#0      GGCGGGCGAGCTGGTCGCACTCCCTCTTGTTCTGCCGAGCCGTCGCTGCCGCTTGGATGA 1663
consensus_3005#1      GGCGGGCGAGCTGGTCGCACTCCCTCTTGTTCTGCCGAGCCGTCGCTGCCGCTTGGATGA 1765
                      ************************************************************

consensus_3005#0      TGCTGGAGATGAGCCCGCCGACGTCCGCGCCGACCAGCTGCGCCACCGTCGCCGCCTGCC 1723
consensus_3005#1      TGCTGGAGATGAGCCCGCCGACGTCCGCGCCGACCAGCTGCGCCACCGTCGCCGCCTGCC 1825
                      ************************************************************

consensus_3005#0      CCAACCCACCCCACACAGCCATGGATTACGTTAGAGGTCGAAACTCGATAAATCAAAGGG 1783
consensus_3005#1      CCAACCCACCCCACACAGCCATG------------------------------------- 1848
                      ***********************                                     

consensus_3005#0      GAGATGGAGAGGTTTAATCATCTCTCTGTCAAGTCTTTTGGCTTAAATCTTCTTTATGAT 1843
consensus_3005#1      ------------------------------------------------------------
                                                                                  

consensus_3005#0      CGAGTGGTTTGCTTATTTGACCAACCATATTATTATATGATGGAATCATGGATTGATGGA 1903
consensus_3005#1      ------------------------------------------------------------
                                                                                  

consensus_3005#0      AGTACCTTCGGCGAAATAAAGCATGTCT 1931
consensus_3005#1      ----------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)