Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3011 cluster # 3011       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3011#0 length = 2510 sequences # 1  
consensus_3011#1 length = 1059 sequences # 1  

consensusID : consensus_3011#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2510
fasta sequence
                              [CTTGATTTCCCAATAAAATCCATGTGAACACGTCCTATGTATCTTTGACCGTAATTATCTAAGTCATGCTGAGATTTATCCTTTCAATATCATGAGCCAGTCTTTTCCGCCGAGATTATCCTTCTTTTCTTGCATTTCTGACATAAGAGGGATGTATTTATTGATGTAAAATTTCCGGAATTGTTCTCTATATGTTGGAGCCTGAAGGCCCTGTAATATTTTATTTTTCTGTACTTTATATCTTATCCCTGATATAAATTAATCCGTACATAAATCAACCCACAATGTCAAGAACCTACTAATATATGACATCTTAGAAGAGAGAGAAATCGTTCAAGAAGCAAACTTGGAGAAGTAATGTGGACATGTGGTAGACTGACCATTCATAACGCGTTCTCAAAAAACAAAAGAACACCATTCATAACGCGCTTGTCCTTAACGCGTTTGCCGATGTGTATGTGTGTTTTGTGTTCTCTTTCTTTATTTGTTTTTACTTGGGGTAGGTAGCCTATTTCAAAGATTCCAAAGAATGAGTAATTTTTCTAGAGGTTATGAATACGATAGCAGTTTTAAAAACGGGTTTATCCGCGTGTGACTTTGTAATCATGGCAGAGCTTATCCGATGATTGATCAAAGTTTTTATTTACATTTACAGTTCCTTATTTATTAATATATTAGGCAACTAGTTTTCCTACTTTAGAAAAAAGTTCACTTTCATTTGAGTTACCAGATCGTTTGACCGCTGATTCGCTATACACTGTACTGAATAGTAGCAATTTTTTGCTATTTATGTCCGAACATCCAGAACACCCAAACAAGGATTATACACAACAGTAATGACTTGCACACTTGAAAATGATTGGCATGTTAGACATTTAGAAATGCCCTGTTGCTGCTCATGTGTGAACATTTTTAGACAAAAGATAAGCGATCCAGCTTTCGATAGAAAGCCACAACGGCTTCATGCCTGAACATTTCCAAAACAAGGGTAATAAAATCACAAGAGTAAATTTGGGGCATAAGATTTTATTGATGGTATAATAGTAATGACTTACACACTGTTTAATGACTTTACGTACTGTAGTTCTATGCTTCTATTGCTGTATGAGCATATACTATCTGTAAATCCTTAGTACACAGCAGGCAGCAGGATGCCAGGATAAACTCTTGTCTGCATGTCTGAGCTTGGACACCGATGGACTCACTCTAGCAATGAAAGTACAGTAGTAGTACACTTGAACTGACTCAGGAACCTTGTTCTATGGCTTGCCAGTAGACTCTGCAGCACTACACGCAACTCTCTCCATACCAATATAAGTGCAACCTAGCACGAATATGATATATTTTAGAACTACGAATCTAGATAGCTACCTATCTAGATTCGTAGTGGTAGAATATGTTACAGCCGTACTAAGTTACACTGGGATGGATGGAATAGCAAGCAACGGCAGCCAGCCGACCCGTTCTTGTAGATGCAGTGCTAATTCACCCAGACTCAACATAGGTTGAGCGAGAATTATTGTGTTCTTGCATAGTTGCAAATGGTGCAGCCATAAGATAAGAATTTTCACCGAACCGCAGAGCGTGTTGACGAAGGAGTGGTTGGTGTTGATCTCTCTCTCCTTGCTTTGCCTCCTCCATGTCACGCGCCTCGATCGGCAGCTTCAACCGAGGAGCAGAACGACGAGTGGCGGCATACCAAGAAAGAGTGTGATCCACGCCATCCCCGGCGCAAGAACGGCGAGGAGCCGCCGAAGCGGCGGCGCCACCGGCGTGACGCGGGCGTAGAGCTCCATGACGCCGACGTAGAACGTCGCCGGGACGGCGACGGTCAGGGTGGAGACAGCCATGCGCAGGACGGGGTGGTCGGCCGCGCCGTCGTACTCGTACCCCGCGGCGGCGTCGCCCACCGCGAAACTGTTGGACAGGATCGCGAGGATCTGGGCGAAGGCGACAGAGACCAGGATGGCCAACATGGCGAGCTCCGCAGAATTATCTGCGAGGAAAGAGGAGAAAATTAGAAAAGATAACACGCGATCATACAGAGAATTAGAGGTCGATCTCATGGCGATGGCCTCTCACCTCTCCCCTCACGTCCACCGGGTGGAGAAGAGGGGGTGGAGGATCGAGCGAGTAAAGGGGGATAATATAGGCTAAGCACTATTAAACCGCGGCAAACGACGGCATCGAGGTTTAATCGGTCACATGACAGTCAGTACGTTTACTAGCTAGCCGTTCGCGGTAAACAGTACCATTCCGTTTTGATTTCTAATCTTTTCGCCCATCAAAAGATGAGATAGTGTTGCTACACGAACAATTTTTCTTCAGACTCACAAGTCAATGGTGTGGAGGGTTTCTGGGCAAGATGAAAGAAACTTCGCGGCTACATGCACGCATTTTGTTTTCTGAATATGTAAAATGTCATTAACTCAACATCAGCTAGTACCGTAGTTTGTAAAATTGTTTGGCAAGAATGTACCAGGTATTTTCTCTCTTTACAGTGGGTGCAA]

[+] EMBL AK106950             [CTTGATTTCCCAATAAAATCCATGTGAACACGTCCTATGTATCTTTGACCGTAATTATCTAAGTCATGCTGAGATTTATCCTTTCAATATCATGAGCCAGTCTTTTCCGCCGAGATTATCCTTCTTTTCTTGCATTTCTGACATAAGAGGGATGTATTTATTGATGTAAAATTTCCGGAATTGTTCTCTATATGTTGGAGCCTGAAGGCCCTGTAATATTTTATTTTTCTGTACTTTATATCTTATCCCTGATATAAATTAATCCGTACATAAATCAACCCACAATGTCAAGAACCTACTAATATATGACATCTTAGAAGAGAGAGAAATCGTTCAAGAAGCAAACTTGGAGAAGTAATGTGGACATGTGGTAGACTGACCATTCATAACGCGTTCTCAAAAAACAAAAGAACACCATTCATAACGCGCTTGTCCTTAACGCGTTTGCCGATGTGTATGTGTGTTTTGTGTTCTCTTTCTTTATTTGTTTTTACTTGGGGTAGGTAGCCTATTTCAAAGATTCCAAAGAATGAGTAATTTTTCTAGAGGTTATGAATACGATAGCAGTTTTAAAAACGGGTTTATCCGCGTGTGACTTTGTAATCATGGCAGAGCTTATCCGATGATTGATCAAAGTTTTTATTTACATTTACAGTTCCTTATTTATTAATATATTAGGCAACTAGTTTTCCTACTTTAGAAAAAAGTTCACTTTCATTTGAGTTACCAGATCGTTTGACCGCTGATTCGCTATACACTGTACTGAATAGTAGCAATTTTTTGCTATTTATGTCCGAACATCCAGAACACCCAAACAAGGATTATACACAACAGTAATGACTTGCACACTTGAAAATGATTGGCATGTTAGACATTTAGAAATGCCCTGTTGCTGCTCATGTGTGAACATTTTTAGACAAAAGATAAGCGATCCAGCTTTCGATAGAAAGCCACAACGGCTTCATGCCTGAACATTTCCAAAACAAGGGTAATAAAATCACAAGAGTAAATTTGGGGCATAAGATTTTATTGATGGTATAATAGTAATGACTTACACACTGTTTAATGACTTTACGTACTGTAGTTCTATGCTTCTATTGCTGTATGAGCATATACTATCTGTAAATCCTTAGTACACAGCAGGCAGCAGGATGCCAGGATAAACTCTTGTCTGCATGTCTGAGCTTGGACACCGATGGACTCACTCTAGCAATGAAAGTACAGTAGTAGTACACTTGAACTGACTCAGGAACCTTGTTCTATGGCTTGCCAGTAGACTCTGCAGCACTACACGCAACTCTCTCCATACCAATATAAGTGCAACCTAGCACGAATATGATATATTTTAGAACTACGAATCTAGATAGCTACCTATCTAGATTCGTAGTGGTAGAATATGTTACAGCCGTACTAAGTTACACTGGGATGGATGGAATAGCAAGCAACGGCAGCCAGCCGACCCGTTCTTGTAGATGCAGTGCTAATTCACCCAGACTCAACATAGGTTGAGCGAGAATTATTGTGTTCTTGCATAGTTGCAAATGGTGCAGCCATAAGATAAGAATTTTCACCGAACCGCAGAGCGTGTTGACGAAGGAGTGGTTGGTGTTGATCTCTCTCTCCTTGCTTTGCCTCCTCCATGTCACGCGCCTCGATCGGCAGCTTCAACCGAGGAGCAGAACGACGAGTGGCGGCATACCAAGAAAGAGTGTGATCCACGCCATCCCCGGCGCAAGAACGGCGAGGAGCCGCCGAAGCGGCGGCGCCACCGGCGTGACGCGGGCGTAGAGCTCCATGACGCCGACGTAGAACGTCGCCGGGACGGCGACGGTCAGGGTGGAGACAGCCATGCGCAGGACGGGGTGGTCGGCCGCGCCGTCGTACTCGTACCCCGCGGCGGCGTCGCCCACCGCGAAACTGTTGGACAGGATCGCGAGGATCTGGGCGAAGGCGACAGAGACCAGGATGGCCAACATGGCGAGCTCCGCAGAATTATCTGCGAGGAAAGAGGAGAAAATTAGAAAAGATAACACGCGATCATACAGAGAATTAGAGGTCGATCTCATGGCGATGGCCTCTCACCTCTCCCCTCACGTCCACCGGGTGGAGAAGAGGGGGTGGAGGATCGAGCGAGTAAAGGGGGATAATATAGGCTAAGCACTATTAAACCGCGGCAAACGACGGCATCGAGGTTTAATCGGTCACATGACAGTCAGTACGTTTACTAGCTAGCCGTTCGCGGTAAACAGTACCATTCCGTTTTGATTTCTAATCTTTTCGCCCATCAAAAGATGAGATAGTGTTGCTACACGAACAATTTTTCTTCAGACTCACAAGTCAATGGTGTGGAGGGTTTCTGGGCAAGATGAAAGAAACTTCGCGGCTACATGCACGCATTTTGTTTTCTGAATATGTAAAATGTCATTAACTCAACATCAGCTAGTACCGTAGTTTGTAAAATTGTTTGGCAAGAATGTACCAGGTATTTTCTCTCTTTACAGTGGGTGCAA]


>consensus_3011#0 CTTGATTTCCCAATAAAATCCATGTGAACACGTCCTATGTATCTTTGACCGTAATTATCT AAGTCATGCTGAGATTTATCCTTTCAATATCATGAGCCAGTCTTTTCCGCCGAGATTATC CTTCTTTTCTTGCATTTCTGACATAAGAGGGATGTATTTATTGATGTAAAATTTCCGGAA TTGTTCTCTATATGTTGGAGCCTGAAGGCCCTGTAATATTTTATTTTTCTGTACTTTATA TCTTATCCCTGATATAAATTAATCCGTACATAAATCAACCCACAATGTCAAGAACCTACT AATATATGACATCTTAGAAGAGAGAGAAATCGTTCAAGAAGCAAACTTGGAGAAGTAATG TGGACATGTGGTAGACTGACCATTCATAACGCGTTCTCAAAAAACAAAAGAACACCATTC ATAACGCGCTTGTCCTTAACGCGTTTGCCGATGTGTATGTGTGTTTTGTGTTCTCTTTCT TTATTTGTTTTTACTTGGGGTAGGTAGCCTATTTCAAAGATTCCAAAGAATGAGTAATTT TTCTAGAGGTTATGAATACGATAGCAGTTTTAAAAACGGGTTTATCCGCGTGTGACTTTG TAATCATGGCAGAGCTTATCCGATGATTGATCAAAGTTTTTATTTACATTTACAGTTCCT TATTTATTAATATATTAGGCAACTAGTTTTCCTACTTTAGAAAAAAGTTCACTTTCATTT GAGTTACCAGATCGTTTGACCGCTGATTCGCTATACACTGTACTGAATAGTAGCAATTTT TTGCTATTTATGTCCGAACATCCAGAACACCCAAACAAGGATTATACACAACAGTAATGA CTTGCACACTTGAAAATGATTGGCATGTTAGACATTTAGAAATGCCCTGTTGCTGCTCAT GTGTGAACATTTTTAGACAAAAGATAAGCGATCCAGCTTTCGATAGAAAGCCACAACGGC TTCATGCCTGAACATTTCCAAAACAAGGGTAATAAAATCACAAGAGTAAATTTGGGGCAT AAGATTTTATTGATGGTATAATAGTAATGACTTACACACTGTTTAATGACTTTACGTACT GTAGTTCTATGCTTCTATTGCTGTATGAGCATATACTATCTGTAAATCCTTAGTACACAG CAGGCAGCAGGATGCCAGGATAAACTCTTGTCTGCATGTCTGAGCTTGGACACCGATGGA CTCACTCTAGCAATGAAAGTACAGTAGTAGTACACTTGAACTGACTCAGGAACCTTGTTC TATGGCTTGCCAGTAGACTCTGCAGCACTACACGCAACTCTCTCCATACCAATATAAGTG CAACCTAGCACGAATATGATATATTTTAGAACTACGAATCTAGATAGCTACCTATCTAGA TTCGTAGTGGTAGAATATGTTACAGCCGTACTAAGTTACACTGGGATGGATGGAATAGCA AGCAACGGCAGCCAGCCGACCCGTTCTTGTAGATGCAGTGCTAATTCACCCAGACTCAAC ATAGGTTGAGCGAGAATTATTGTGTTCTTGCATAGTTGCAAATGGTGCAGCCATAAGATA AGAATTTTCACCGAACCGCAGAGCGTGTTGACGAAGGAGTGGTTGGTGTTGATCTCTCTC TCCTTGCTTTGCCTCCTCCATGTCACGCGCCTCGATCGGCAGCTTCAACCGAGGAGCAGA ACGACGAGTGGCGGCATACCAAGAAAGAGTGTGATCCACGCCATCCCCGGCGCAAGAACG GCGAGGAGCCGCCGAAGCGGCGGCGCCACCGGCGTGACGCGGGCGTAGAGCTCCATGACG CCGACGTAGAACGTCGCCGGGACGGCGACGGTCAGGGTGGAGACAGCCATGCGCAGGACG GGGTGGTCGGCCGCGCCGTCGTACTCGTACCCCGCGGCGGCGTCGCCCACCGCGAAACTG TTGGACAGGATCGCGAGGATCTGGGCGAAGGCGACAGAGACCAGGATGGCCAACATGGCG AGCTCCGCAGAATTATCTGCGAGGAAAGAGGAGAAAATTAGAAAAGATAACACGCGATCA TACAGAGAATTAGAGGTCGATCTCATGGCGATGGCCTCTCACCTCTCCCCTCACGTCCAC CGGGTGGAGAAGAGGGGGTGGAGGATCGAGCGAGTAAAGGGGGATAATATAGGCTAAGCA CTATTAAACCGCGGCAAACGACGGCATCGAGGTTTAATCGGTCACATGACAGTCAGTACG TTTACTAGCTAGCCGTTCGCGGTAAACAGTACCATTCCGTTTTGATTTCTAATCTTTTCG CCCATCAAAAGATGAGATAGTGTTGCTACACGAACAATTTTTCTTCAGACTCACAAGTCA ATGGTGTGGAGGGTTTCTGGGCAAGATGAAAGAAACTTCGCGGCTACATGCACGCATTTT GTTTTCTGAATATGTAAAATGTCATTAACTCAACATCAGCTAGTACCGTAGTTTGTAAAA TTGTTTGGCAAGAATGTACCAGGTATTTTCTCTCTTTACAGTGGGTGCAA



consensusID : consensus_3011#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1059
fasta sequence
                              [AATTTGGGGCATAAGATTTTATTGATGGTATAATAGTAATGACTTACACACTGTTTAATGACTTTACGTACTGTAGTTCTATGCTTCTATTGCTGTATGAGCATATACTATCTGTAAATCCTTAGTACACAGCAGGCAGCAGGATGCCAGGATAAACTCTTGTCTGCATGTCTGAGCTTGGACACCGATGGACTCACTCTAGCAATGAAAGTACAGTAGTAGTACACTTGAACTGACTCAGGAACCTTGTTCTATGGCTTGCCAGTAGACTCTGCAGCACTACACGCAACTCTCTCCATACCAATATAAGTGCAACCTAGCACGAATATGATATATTTTAGAACTACGAATCTAGATAGCTACCTATCTAGATTCGTAGTGGTAGAATATGTTACAGCCGTACTAAGTTACACTGGGATGGATGGAATAGCAAGCAACGGCAGCCAGCCGACCCGTTCTTGTAGATGCAGTGCTAATTCACCCAGACTCAACATAGGTTGAGCGAGAATTATTGTGTTCTTGCATAGTTGCAAATGGTGCAGCCATAAGATAAGAATTTTCACCGAACCGCAGAGCGTGTTGACGAAGGAGTGGTTGGTGTTGATCTCTCTCTCCTTGCTTTGCCTCCTCCATGTCACGCGCCTCGATCGGCAGCTTCAACCGAGGAGCAGAACGACGAGTGGCGGCATACCAAGAAAGAGTGTGATCCACGCCATCCCCGGCGCAAGAACGGCGAGGAGCCGCCGAAGCGGCGGCGCCACCGGCGTGACGCGGGCGTAGAGCTCCATGACGCCGACGTAGAACGTCGCCGGGACGGCGACGGTCAGGGTGGAGACAGCCATGCGCAGGACGGGGTGGTCGGCCGCGCCGTCGTACTCGTACCCCGCGGCGGCGTCGCCCACCGCGAAACTGTTGGACAGGATCGCGAGGATCTGGGCGAAGGCGACAGAGACCAGGATGGCCAACATGGCGAGCTCCGCAGAATTATCTCTCCCCTCACGTCCACCGGGTGGAGAAGAGGGGGTGGAGGATCGAGCGAGTAAAGGGGGATAATATAGG]

[-] EMBL AK111302             [AATTTGGGGCATAAGATTTTATTGATGGTATAATAGTAATGACTTACACACTGTTTAATGACTTTACGTACTGTAGTTCTATGCTTCTATTGCTGTATGAGCATATACTATCTGTAAATCCTTAGTACACAGCAGGCAGCAGGATGCCAGGATAAACTCTTGTCTGCATGTCTGAGCTTGGACACCGATGGACTCACTCTAGCAATGAAAGTACAGTAGTAGTACACTTGAACTGACTCAGGAACCTTGTTCTATGGCTTGCCAGTAGACTCTGCAGCACTACACGCAACTCTCTCCATACCAATATAAGTGCAACCTAGCACGAATATGATATATTTTAGAACTACGAATCTAGATAGCTACCTATCTAGATTCGTAGTGGTAGAATATGTTACAGCCGTACTAAGTTACACTGGGATGGATGGAATAGCAAGCAACGGCAGCCAGCCGACCCGTTCTTGTAGATGCAGTGCTAATTCACCCAGACTCAACATAGGTTGAGCGAGAATTATTGTGTTCTTGCATAGTTGCAAATGGTGCAGCCATAAGATAAGAATTTTCACCGAACCGCAGAGCGTGTTGACGAAGGAGTGGTTGGTGTTGATCTCTCTCTCCTTGCTTTGCCTCCTCCATGTCACGCGCCTCGATCGGCAGCTTCAACCGAGGAGCAGAACGACGAGTGGCGGCATACCAAGAAAGAGTGTGATCCACGCCATCCCCGGCGCAAGAACGGCGAGGAGCCGCCGAAGCGGCGGCGCCACCGGCGTGACGCGGGCGTAGAGCTCCATGACGCCGACGTAGAACGTCGCCGGGACGGCGACGGTCAGGGTGGAGACAGCCATGCGCAGGACGGGGTGGTCGGCCGCGCCGTCGTACTCGTACCCCGCGGCGGCGTCGCCCACCGCGAAACTGTTGGACAGGATCGCGAGGATCTGGGCGAAGGCGACAGAGACCAGGATGGCCAACATGGCGAGCTCCGCAGAATTATCTCTCCCCTCACGTCCACCGGGTGGAGAAGAGGGGGTGGAGGATCGAGCGAGTAAAGGGGGATAATATAGG]


>consensus_3011#1 AATTTGGGGCATAAGATTTTATTGATGGTATAATAGTAATGACTTACACACTGTTTAATG ACTTTACGTACTGTAGTTCTATGCTTCTATTGCTGTATGAGCATATACTATCTGTAAATC CTTAGTACACAGCAGGCAGCAGGATGCCAGGATAAACTCTTGTCTGCATGTCTGAGCTTG GACACCGATGGACTCACTCTAGCAATGAAAGTACAGTAGTAGTACACTTGAACTGACTCA GGAACCTTGTTCTATGGCTTGCCAGTAGACTCTGCAGCACTACACGCAACTCTCTCCATA CCAATATAAGTGCAACCTAGCACGAATATGATATATTTTAGAACTACGAATCTAGATAGC TACCTATCTAGATTCGTAGTGGTAGAATATGTTACAGCCGTACTAAGTTACACTGGGATG GATGGAATAGCAAGCAACGGCAGCCAGCCGACCCGTTCTTGTAGATGCAGTGCTAATTCA CCCAGACTCAACATAGGTTGAGCGAGAATTATTGTGTTCTTGCATAGTTGCAAATGGTGC AGCCATAAGATAAGAATTTTCACCGAACCGCAGAGCGTGTTGACGAAGGAGTGGTTGGTG TTGATCTCTCTCTCCTTGCTTTGCCTCCTCCATGTCACGCGCCTCGATCGGCAGCTTCAA CCGAGGAGCAGAACGACGAGTGGCGGCATACCAAGAAAGAGTGTGATCCACGCCATCCCC GGCGCAAGAACGGCGAGGAGCCGCCGAAGCGGCGGCGCCACCGGCGTGACGCGGGCGTAG AGCTCCATGACGCCGACGTAGAACGTCGCCGGGACGGCGACGGTCAGGGTGGAGACAGCC ATGCGCAGGACGGGGTGGTCGGCCGCGCCGTCGTACTCGTACCCCGCGGCGGCGTCGCCC ACCGCGAAACTGTTGGACAGGATCGCGAGGATCTGGGCGAAGGCGACAGAGACCAGGATG GCCAACATGGCGAGCTCCGCAGAATTATCTCTCCCCTCACGTCCACCGGGTGGAGAAGAG GGGGTGGAGGATCGAGCGAGTAAAGGGGGATAATATAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3011#0      CTTGATTTCCCAATAAAATCCATGTGAACACGTCCTATGTATCTTTGACCGTAATTATCT 60
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      AAGTCATGCTGAGATTTATCCTTTCAATATCATGAGCCAGTCTTTTCCGCCGAGATTATC 120
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      CTTCTTTTCTTGCATTTCTGACATAAGAGGGATGTATTTATTGATGTAAAATTTCCGGAA 180
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TTGTTCTCTATATGTTGGAGCCTGAAGGCCCTGTAATATTTTATTTTTCTGTACTTTATA 240
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TCTTATCCCTGATATAAATTAATCCGTACATAAATCAACCCACAATGTCAAGAACCTACT 300
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      AATATATGACATCTTAGAAGAGAGAGAAATCGTTCAAGAAGCAAACTTGGAGAAGTAATG 360
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TGGACATGTGGTAGACTGACCATTCATAACGCGTTCTCAAAAAACAAAAGAACACCATTC 420
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      ATAACGCGCTTGTCCTTAACGCGTTTGCCGATGTGTATGTGTGTTTTGTGTTCTCTTTCT 480
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TTATTTGTTTTTACTTGGGGTAGGTAGCCTATTTCAAAGATTCCAAAGAATGAGTAATTT 540
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TTCTAGAGGTTATGAATACGATAGCAGTTTTAAAAACGGGTTTATCCGCGTGTGACTTTG 600
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TAATCATGGCAGAGCTTATCCGATGATTGATCAAAGTTTTTATTTACATTTACAGTTCCT 660
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TATTTATTAATATATTAGGCAACTAGTTTTCCTACTTTAGAAAAAAGTTCACTTTCATTT 720
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      GAGTTACCAGATCGTTTGACCGCTGATTCGCTATACACTGTACTGAATAGTAGCAATTTT 780
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TTGCTATTTATGTCCGAACATCCAGAACACCCAAACAAGGATTATACACAACAGTAATGA 840
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      CTTGCACACTTGAAAATGATTGGCATGTTAGACATTTAGAAATGCCCTGTTGCTGCTCAT 900
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      GTGTGAACATTTTTAGACAAAAGATAAGCGATCCAGCTTTCGATAGAAAGCCACAACGGC 960
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TTCATGCCTGAACATTTCCAAAACAAGGGTAATAAAATCACAAGAGTAAATTTGGGGCAT 1020
consensus_3011#1      ------------------------------------------------AATTTGGGGCAT 12
                                                                      ************

consensus_3011#0      AAGATTTTATTGATGGTATAATAGTAATGACTTACACACTGTTTAATGACTTTACGTACT 1080
consensus_3011#1      AAGATTTTATTGATGGTATAATAGTAATGACTTACACACTGTTTAATGACTTTACGTACT 72
                      ************************************************************

consensus_3011#0      GTAGTTCTATGCTTCTATTGCTGTATGAGCATATACTATCTGTAAATCCTTAGTACACAG 1140
consensus_3011#1      GTAGTTCTATGCTTCTATTGCTGTATGAGCATATACTATCTGTAAATCCTTAGTACACAG 132
                      ************************************************************

consensus_3011#0      CAGGCAGCAGGATGCCAGGATAAACTCTTGTCTGCATGTCTGAGCTTGGACACCGATGGA 1200
consensus_3011#1      CAGGCAGCAGGATGCCAGGATAAACTCTTGTCTGCATGTCTGAGCTTGGACACCGATGGA 192
                      ************************************************************

consensus_3011#0      CTCACTCTAGCAATGAAAGTACAGTAGTAGTACACTTGAACTGACTCAGGAACCTTGTTC 1260
consensus_3011#1      CTCACTCTAGCAATGAAAGTACAGTAGTAGTACACTTGAACTGACTCAGGAACCTTGTTC 252
                      ************************************************************

consensus_3011#0      TATGGCTTGCCAGTAGACTCTGCAGCACTACACGCAACTCTCTCCATACCAATATAAGTG 1320
consensus_3011#1      TATGGCTTGCCAGTAGACTCTGCAGCACTACACGCAACTCTCTCCATACCAATATAAGTG 312
                      ************************************************************

consensus_3011#0      CAACCTAGCACGAATATGATATATTTTAGAACTACGAATCTAGATAGCTACCTATCTAGA 1380
consensus_3011#1      CAACCTAGCACGAATATGATATATTTTAGAACTACGAATCTAGATAGCTACCTATCTAGA 372
                      ************************************************************

consensus_3011#0      TTCGTAGTGGTAGAATATGTTACAGCCGTACTAAGTTACACTGGGATGGATGGAATAGCA 1440
consensus_3011#1      TTCGTAGTGGTAGAATATGTTACAGCCGTACTAAGTTACACTGGGATGGATGGAATAGCA 432
                      ************************************************************

consensus_3011#0      AGCAACGGCAGCCAGCCGACCCGTTCTTGTAGATGCAGTGCTAATTCACCCAGACTCAAC 1500
consensus_3011#1      AGCAACGGCAGCCAGCCGACCCGTTCTTGTAGATGCAGTGCTAATTCACCCAGACTCAAC 492
                      ************************************************************

consensus_3011#0      ATAGGTTGAGCGAGAATTATTGTGTTCTTGCATAGTTGCAAATGGTGCAGCCATAAGATA 1560
consensus_3011#1      ATAGGTTGAGCGAGAATTATTGTGTTCTTGCATAGTTGCAAATGGTGCAGCCATAAGATA 552
                      ************************************************************

consensus_3011#0      AGAATTTTCACCGAACCGCAGAGCGTGTTGACGAAGGAGTGGTTGGTGTTGATCTCTCTC 1620
consensus_3011#1      AGAATTTTCACCGAACCGCAGAGCGTGTTGACGAAGGAGTGGTTGGTGTTGATCTCTCTC 612
                      ************************************************************

consensus_3011#0      TCCTTGCTTTGCCTCCTCCATGTCACGCGCCTCGATCGGCAGCTTCAACCGAGGAGCAGA 1680
consensus_3011#1      TCCTTGCTTTGCCTCCTCCATGTCACGCGCCTCGATCGGCAGCTTCAACCGAGGAGCAGA 672
                      ************************************************************

consensus_3011#0      ACGACGAGTGGCGGCATACCAAGAAAGAGTGTGATCCACGCCATCCCCGGCGCAAGAACG 1740
consensus_3011#1      ACGACGAGTGGCGGCATACCAAGAAAGAGTGTGATCCACGCCATCCCCGGCGCAAGAACG 732
                      ************************************************************

consensus_3011#0      GCGAGGAGCCGCCGAAGCGGCGGCGCCACCGGCGTGACGCGGGCGTAGAGCTCCATGACG 1800
consensus_3011#1      GCGAGGAGCCGCCGAAGCGGCGGCGCCACCGGCGTGACGCGGGCGTAGAGCTCCATGACG 792
                      ************************************************************

consensus_3011#0      CCGACGTAGAACGTCGCCGGGACGGCGACGGTCAGGGTGGAGACAGCCATGCGCAGGACG 1860
consensus_3011#1      CCGACGTAGAACGTCGCCGGGACGGCGACGGTCAGGGTGGAGACAGCCATGCGCAGGACG 852
                      ************************************************************

consensus_3011#0      GGGTGGTCGGCCGCGCCGTCGTACTCGTACCCCGCGGCGGCGTCGCCCACCGCGAAACTG 1920
consensus_3011#1      GGGTGGTCGGCCGCGCCGTCGTACTCGTACCCCGCGGCGGCGTCGCCCACCGCGAAACTG 912
                      ************************************************************

consensus_3011#0      TTGGACAGGATCGCGAGGATCTGGGCGAAGGCGACAGAGACCAGGATGGCCAACATGGCG 1980
consensus_3011#1      TTGGACAGGATCGCGAGGATCTGGGCGAAGGCGACAGAGACCAGGATGGCCAACATGGCG 972
                      ************************************************************

consensus_3011#0      AGCTCCGCAGAATTATCTGCGAGGAAAGAGGAGAAAATTAGAAAAGATAACACGCGATCA 2040
consensus_3011#1      AGCTCCGCAGAATTATCT------------------------------------------ 990
                      ******************                                          

consensus_3011#0      TACAGAGAATTAGAGGTCGATCTCATGGCGATGGCCTCTCACCTCTCCCCTCACGTCCAC 2100
consensus_3011#1      --------------------------------------------CTCCCCTCACGTCCAC 1006
                                                                  ****************

consensus_3011#0      CGGGTGGAGAAGAGGGGGTGGAGGATCGAGCGAGTAAAGGGGGATAATATAGGCTAAGCA 2160
consensus_3011#1      CGGGTGGAGAAGAGGGGGTGGAGGATCGAGCGAGTAAAGGGGGATAATATAGG------- 1059
                      *****************************************************       

consensus_3011#0      CTATTAAACCGCGGCAAACGACGGCATCGAGGTTTAATCGGTCACATGACAGTCAGTACG 2220
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TTTACTAGCTAGCCGTTCGCGGTAAACAGTACCATTCCGTTTTGATTTCTAATCTTTTCG 2280
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      CCCATCAAAAGATGAGATAGTGTTGCTACACGAACAATTTTTCTTCAGACTCACAAGTCA 2340
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      ATGGTGTGGAGGGTTTCTGGGCAAGATGAAAGAAACTTCGCGGCTACATGCACGCATTTT 2400
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      GTTTTCTGAATATGTAAAATGTCATTAACTCAACATCAGCTAGTACCGTAGTTTGTAAAA 2460
consensus_3011#1      ------------------------------------------------------------
                                                                                  

consensus_3011#0      TTGTTTGGCAAGAATGTACCAGGTATTTTCTCTCTTTACAGTGGGTGCAA 2510
consensus_3011#1      --------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)