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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3088 cluster # 3088       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3088#0 length = 1002 sequences # 2  

consensusID : consensus_3088#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1002
fasta sequence
                              [AGAATTCATGGGCGAGAGCTGCTACGTCAGGAGGCTCTCGGACCTGCTCCAGGAGCAGCAGGAGCCCTTCCTCCTCGCCGGCGGAGCTTCCCTCGCCGACGCATGCAGGCGCCGCCTGCTCGCCTTCTGCCACCGCCGCGCCGCCGTCAGCAACAAGAGCCGCGCATTGGGGGGCTTGGGCGCCGCCGTCTTCTGTGGCGCCGCCGTCAGGAGGGCTCTCCTCGCCGGCTGCTTCTCCTGCGGCGCCCGCCAGAGCTTCCGCCGGCTGCGCCACGCCGGCGCCGGCGACATTGCTGCTGGCTGCGACGTCGACGACGACGAGGAGGAGGAATGTGCGAGGCAGCTCAGCCCGATGTCCGTACTCGACCTCGATATTAACTCCGACGACGAATCGTCCTCCATGCTCGGCGTCGGCCACCGTAAGCCCTGATCTCTGCTGCTTCGCCATTTCAAGAATTCAATTCTGACTCTGTTTTCTCCATACAGGTGAGAAGGACGACGAGTCGCCGTCGACTTCAGGGAAGAGCTCGCCGCCGCCGCCACCGGAGCAGAATCCGCTCGACGCCGCCGCCGCTCCATGCTTCACCTTCTACGAGGCCGGCAAGAATTGCAAAGCGGAGACAGGAGACGAAGAAGAGTACGAGACGACGAGGTCCAAGCTGGAGGAGCAGATGATCATCTCCTCCTGGGAGAGGATCTCCGGCGACATCTCGAGGATCCCCGCGCTGGTGGAGCTCGACCTCACCGGCTCACTGCAGCAATGGAGGCGGCTCAGGGAGGAGGAAGCATCGCAGGTAGGGGCAAGCATAGAGGCCATGATCTTCGAGGAGATGAGAGTGGAGGCTGTGCGTGACATGATGCTTGTTGCCTGAATCTTTGACACCTCCTGAATGTAAATAAATTCCAATTGGGCACAACATCTTGTTGATGATTCCAACTGTAAAACGAAAAG-AAAAAAAACAACTGGATAGGGTTCTTTGATGTGTAACACAAATGAGTTTT]

[+] EMBL AK110851             [AGAATTCATGGGCGAGAGCTGCTACGTCAGGAGGCTCTCGGACCTGCTCCAGGAGCAGCAGGAGCCCTTCCTCCTCGCCGGCGGAGCTTCCCTCGCCGACGCATGCAGGCGCCGCCTGCTCGCCTTCTGCCACCGCCGCGCCGCCGTCAGCAACAAGAGCCGCGCATTGGGGGGCTTGGGCGCCGCCGTCTTCTGTGGCGCCGCCGTCAGGAGGGCTCTCCTCGCCGGCTGCTTCTCCTGCGGCGCCCGCCAGAGCTTCCGCCGGCTGCGCCACGCCGGCGCCGGCGACATTGCTGCTGGCTGCGACGTCGACGACGACGAGGAGGAGGAATGTGCGAGGCAGCTCAGCCCGATGTCCGTACTCGACCTCGATATTAACTCCGACGACGAATCGTCCTCCATGCTCGGCGTCGGCCACCGTAAGCCCTGATCTCTGCTGCTTCGCCATTTCAAGAATTCAATTCTGACTCTGTTTTCTCCATACAGGTGAGAAGGACGACGAGTCGCCGTCGACTTCAGGGAAGAGCTCGCCGCCGCCGCCACCGGAGCAGAATCCGCTCGACGCCGCCGCCGCTCCATGCTTCACCTTCTACGAGGCCGGCAAGAATTGCAAAGCGGAGACAGGAGACGAAGAAGAGTACGAGACGACGAGGTCCAAGCTGGAGGAGCAGATGATCATCTCCTCCTGGGAGAGGATCTCCGGCGACATCTCGAGGATCCCCGCGCTGGTGGAGCTCGACCTCACCGGCTCACTGCAGCAATGGAGGCGGCTCAGGGAGGAGGAAGCATCGCAGGTAGGGGCAAGCATAGAGGCCATGATCTTCGAGGAGATGAGAGTGGAGGCTGTGCGTGACATGATGCTTGTTGCCTGAATCTTTGACACCTCCTGAATGTAAATAAATTCCAATTGGGCACAACATCTTGTTGATGATTCCAACTGTAAAACGAAAAG AAAAAAAACAACTGGATAGGGTTCTTTGATGTGTAACACAAATGAGTTTT]
[+] EMBL CA765354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGAGGAGCAGATGATCATCTCCTCCTGGGAGAGGATCTCCGGCGACATCTCGAGGATCCCCGCGCTGGTGGAGCTCGACCTCACCGGCTCACTGCAGCAATGGAGGCGGCTCAGGGAGGAGGAAGCATCGCAGGTAGGGGCAAGCATAGAGGCCATGATCTTCGAGGAGATGAGAGTGGAGGCTGTGCGTGACATGATGCTTGTTGCCTGAATCTTTGACACCTCCTGAATGTAAATAAATTCCAATTGGGCACAACATCTTGTTGATGATTCCAACTGTAAAACGAAAAGAAAAAAAAACAACTGGATAGGGTTCTTTGATGTGT                ]


>consensus_3088#0 AGAATTCATGGGCGAGAGCTGCTACGTCAGGAGGCTCTCGGACCTGCTCCAGGAGCAGCA GGAGCCCTTCCTCCTCGCCGGCGGAGCTTCCCTCGCCGACGCATGCAGGCGCCGCCTGCT CGCCTTCTGCCACCGCCGCGCCGCCGTCAGCAACAAGAGCCGCGCATTGGGGGGCTTGGG CGCCGCCGTCTTCTGTGGCGCCGCCGTCAGGAGGGCTCTCCTCGCCGGCTGCTTCTCCTG CGGCGCCCGCCAGAGCTTCCGCCGGCTGCGCCACGCCGGCGCCGGCGACATTGCTGCTGG CTGCGACGTCGACGACGACGAGGAGGAGGAATGTGCGAGGCAGCTCAGCCCGATGTCCGT ACTCGACCTCGATATTAACTCCGACGACGAATCGTCCTCCATGCTCGGCGTCGGCCACCG TAAGCCCTGATCTCTGCTGCTTCGCCATTTCAAGAATTCAATTCTGACTCTGTTTTCTCC ATACAGGTGAGAAGGACGACGAGTCGCCGTCGACTTCAGGGAAGAGCTCGCCGCCGCCGC CACCGGAGCAGAATCCGCTCGACGCCGCCGCCGCTCCATGCTTCACCTTCTACGAGGCCG GCAAGAATTGCAAAGCGGAGACAGGAGACGAAGAAGAGTACGAGACGACGAGGTCCAAGC TGGAGGAGCAGATGATCATCTCCTCCTGGGAGAGGATCTCCGGCGACATCTCGAGGATCC CCGCGCTGGTGGAGCTCGACCTCACCGGCTCACTGCAGCAATGGAGGCGGCTCAGGGAGG AGGAAGCATCGCAGGTAGGGGCAAGCATAGAGGCCATGATCTTCGAGGAGATGAGAGTGG AGGCTGTGCGTGACATGATGCTTGTTGCCTGAATCTTTGACACCTCCTGAATGTAAATAA ATTCCAATTGGGCACAACATCTTGTTGATGATTCCAACTGTAAAACGAAAAGAAAAAAAA CAACTGGATAGGGTTCTTTGATGTGTAACACAAATGAGTTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)