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Oryza sativa
cluster # 3090 cluster # 3090       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3090#0 length = 2214 sequences # 2  

consensusID : consensus_3090#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2214
fasta sequence
                              [GCCCTGCGGTTTCGCCGGCGAAACGAGGCCGACCTAAACCCTCCGCCGCCGCCGCCGCCGTCGCCGGGGAAGAAGAGAGATGGGGGTGGGGGGAAGCTTCTGGGACCTGCTCAAGCCGTACGCGCGGCACGAGGGCGCGGGGTACCTCCGCGGCCGCCGCGTCGCCGTCGACCTCTCCTTCTGGGTCGTCTCCCACAGCGCCGCCATCCGGGCGCGCTCGCCGCACGCGCGCCTCCCCCATCTCCGCACCCTCTTCTTCCGCACCCTCTCCCTCTTCTCCAAGATGGGTGCTTTTCCTGTGTTCGTGGTGGACGGCCAGCCGTCGCCGCTCAAGTCGCAGGTGAGGGCCGCGCGATTCTTCAGAGGATCTGGAATGGACCTCGCTGCGCTGCCGAGCACGGAGGCGGAGGCCAGTGCGGATGCGCTGGTTCAACCGAGGAATGCCAAGTTCACGCGATACGTGGAGGATTGCGTGGAACTGCTTGAATATCTTGGAATGCCTGTGCTGCGGGCAAAAGGTGAAGGTGAAGCTCTTTGTGCTCAGTTGAATAATCAAGGCCATGTAGATGCTTGCATCACTTCAGACAGTGACGCTTTCCTCTTTGGGGCTAAGACTGTCATAAAGGTTCTCCGATCGAATTGTAAGGAACCTTTTGAGTGCTACAACATGGCAGACATTGAGTCTGGTCTTGGACTAAAGAGGAAACAAATGGTAGCAATGGCACTTCTTGTTGGCAGTGACCATGACTTGCATGGTGTGCCTGGTTTTGGTCCTGAGACTGCACTTCGGTTTGTGCAGTTATTTGATGAAGATAATGTTCTAGCTAAATTATATGAAATTGGTAAAGGGGTCTATCCATTTATAGGAGTTAGTGCGCCCAATATTGATGATCTCCCATCACCCTCCACAAAGAGTCTACCGCGTGCGCGATCACCGCACTGCTCACATTGTGGTCACCCTGGCAACAAGAAAAATCATATCAAGGATGGGTGCAACTTTTGCTTGGTTGATTCATTAGAGAATTGTGTGGAGAAGCCAGCTGGATTCATATGTGAATGTCCTAGTTGTGACAAGGCACGTGATCTGAAGGTGCAGAGAAGAAATGAAAACTGGCAAATCAAGGTCTGTAAAAGGATAGCTGCTGAGACTAACTTTCCAAATGAGGAGATCATTAACTTGTACTTGAATGATGACAATTTGGATAATGAAAATGGTGTTCCATTGCTTACATGGAATAAACCTGATATGGAGATTTTGGTTGACTTCTTATCTTTCAAGCAGAACTGGGAGCCAGCGTATATTCGTCAGCGGATGCTTCCTATGCTATCAACCATATATTTACGCGAAATGGCTTCATCTCAATCTAAATCATTTCTTCTTTATGATCAATATAAATTTCATTCAATCCAACGGATTAAGATAAGATATGGTCACCCATATTATTTGGTCAAGTGGAAGAGAGTCACTCGTAGTATGATATCCAATGATCCACCTAGCAAGCAGACAGAATTGGAGGGGAAGAATGATAAGGTGGAGGTATTGGATGGAGATGATGAGGTAGTAGATGAAGAGGAGGAGGAGCCTACAATGATTTCCGAAACTACTGAACTGCTAGATGAGCCAGATGTTCCACAAGTACTGGATGATGATAAAGATTGCTTTTTATTAACTGATGAAGACATTGAGCTAGTGAATGCTGCATTTCCTGATGAAGCACAAAGATTTCAGGAAGAACAGAGGCTGAAAGAAGCAAAGTCAATAGCACGGAAATCCAAGCTCAACGTGGCAGGTTTCGAAACACCAAAAGGTCCAAGGCCTAGTGGAGTTCAGCTTAGCATCAAGGAGTTCTACCGCTCCAAGAAAGGGCTGAGTGGCGACTCAGGGAAGGACGGCTCAAGAAAATCCTCCGATGTGGACCTCAGCAAGAACTTGCCCAAGTCTGTCCGACGACGCCTCCTCTTCGACTGACTGACAATTGGTCTCCCTTCTGTCTTCCCAGTAGTCCTGCTGCTACTGTTGTACATGTTCCAGTAACATTTCTTTCGGCCAATGGATGTACATTGCGTGGCCCGGTTTTTGTACAGGGAACATGCATGTCTTGTAGCTGATGAGAAACAGTGTTTTGGGGGTTGAATCTTGTATCTGCTGCAACCATGTATATTTCATGCCATATCGCATCACTGCTTGCGTAGCATGGAAGAATTGGACCTGAA]

[+] EMBL AK063534             [GCCCTGCGGTTTCGCCGGCGAAACGAGGCCGACCTAAACCCTCCGCCGCCGCCGCCGCCGTCGCCGGGGAAGAAGAGAGATGGGGGTGGGGGGAAGCTTCTGGGACCTGCTCAAGCCGTACGCGCGGCACGAGGGCGCGGGGTACCTCCGCGGCCGCCGCGTCGCCGTCGACCTCTCCTTCTGGGTCGTCTCCCACAGCGCCGCCATCCGGGCGCGCTCGCCGCACGCGCGCCTCCCCCATCTCCGCACCCTCTTCTTCCGCACCCTCTCCCTCTTCTCCAAGATGGGTGCTTTTCCTGTGTTCGTGGTGGACGGCCAGCCGTCGCCGCTCAAGTCGCAGGTGAGGGCCGCGCGATTCTTCAGAGGATCTGGAATGGACCTCGCTGCGCTGCCGAGCACGGAGGCGGAGGCCAGTGCGGATGCGCTGGTTCAACCGAGGAATGCCAAGTTCACGCGATACGTGGAGGATTGCGTGGAACTGCTTGAATATCTTGGAATGCCTGTGCTGCGGGCAAAAGGTGAAGGTGAAGCTCTTTGTGCTCAGTTGAATAATCAAGGCCATGTAGATGCTTGCATCACTTCAGACAGTGACGCTTTCCTCTTTGGGGCTAAGACTGTCATAAAGGTTCTCCGATCGAATTGTAAGGAACCTTTTGAGTGCTACAACATGGCAGACATTGAGTCTGGTCTTGGACTAAAGAGGAAACAAATGGTAGCAATGGCACTTCTTGTTGGCAGTGACCATGACTTGCATGGTGTGCCTGGTTTTGGTCCTGAGACTGCACTTCGGTTTGTGCAGTTATTTGATGAAGATAATGTTCTAGCTAAATTATATGAAATTGGTAAAGGGGTCTATCCATTTATAGGAGTTAGTGCGCCCAATATTGATGATCTCCCATCACCCTCCACAAAGAGTCTACCGCGTGCGCGATCACCGCACTGCTCACATTGTGGTCACCCTGGCAACAAGAAAAATCATATCAAGGATGGGTGCAACTTTTGCTTGGTTGATTCATTAGAGAATTGTGTGGAGAAGCCAGCTGGATTCATATGTGAATGTCCTAGTTGTGACAAGGCACGTGATCTGAAGGTGCAGAGAAGAAATGAAAACTGGCAAATCAAGGTCTGTAAAAGGATAGCTGCTGAGACTAACTTTCCAAATGAGGAGATCATTAACTTGTACTTGAATGATGACAATTTGGATAATGAAAATGGTGTTCCATTGCTTACATGGAATAAACCTGATATGGAGATTTTGGTTGACTTCTTATCTTTCAAGCAGAACTGGGAGCCAGCGTATATTCGTCAGCGGATGCTTCCTATGCTATCAACCATATATTTACGCGAAATGGCTTCATCTCAATCTAAATCATTTCTTCTTTATGATCAATATAAATTTCATTCAATCCAACGGATTAAGATAAGATATGGTCACCCATATTATTTGGTCAAGTGGAAGAGAGTCACTCGTAGTATGATATCCAATGATCCACCTAGCAAGCAGACAGAATTGGAGGGGAAGAATGATAAGGTGGAGGTATTGGATGGAGATGATGAGGTAGTAGATGAAGAGGAGGAGGAGCCTACAATGATTTCCGAAACTACTGAACTGCTAGATGAGCCAGATGTTCCACAAGTACTGGATGATGATAAAGATTGCTTTTTATTAACTGATGAAGACATTGAGCTAGTGAATGCTGCATTTCCTGATGAAGCACAAAGATTTCAGGAAGAACAGAGGCTGAAAGAAGCAAAGTCAATAGCACGGAAATCCAAGCTCAACGTGGCAGGTTTCGAAACACCAAAAGGTCCAAGGCCTAGTGGAGTTCAGCTTAGCATCAAGGAGTTCTACCGCTCCAAGAAAGGGCTGAGTGGCGACTCAGGGAAGGACGGCTCAAGAAAATCCTCCGATGTGGACCTCAGCAAGAACTTGCCCAAGTCTGTCCGACGACGCCTCCTCTTCGACTGACTGACAATTGGTCTCCCTTCTGTCTTCCCAGTAGTCCTGCTGCTACTGTTGTACATGTTCCAGTAACATTTCTTTCGGCCAATGGATGTACATTGCGTGGCCCGGTTTTTGTACAGGGAACATGCATGTCTTGTAGCTGATGAGAAACAGTGTTTTGGGGGTTGAATCTTGTATCTGCTGCAACCATGTATATTTCATGCCATATCGCATCACTGCTTGCGTAGCATGGAAGA            ]
[+] EMBL CA765363             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGGAGATGATGAGGTAGTAGATGAAGAGGAGGAGGAGCCTACAATGATTTCCGAAACTACTGAACTGCTAGATGAGCCAGATGTTCCACAAGTACTGGATGATGATAAAGATTGCTTTTTATTAACTGATGAAGACATTGAGCTAGTGAATGCTGCATTTCCTGATGAAGCACAAAGATTTCAGGAAGAACAGAGGCTGAAAGAAGCAAAGTCAATAGCACGGAAATCCAAGCTCAACGTGGCAGGTTTCGAAACACCAAAAGGTCCAAGGCCTAGTGGAGTTCAGCTTAGCATCAAGGAGTTCTACCGCTCCAAGAAAGGGCTGAGTGGCGACTCAGGGAAGGACGGCTCAAGAAAATCCTCCGATGTGGACCTCAGCAAGAACTTGCCCAAGTCTGTCCGACGACGCCTCCTCTTCGACTGACTGACAATTGGTCTCCCTTCTGTCTTCCCAGTAGTCCTGCTGCTACTGTTGTACATGTTCCAATAACATTTCTTTCGGCCAATGGATGTACATTGCGTGGCCCGGTTTTTGTACAGGGAACATGCATGTCTTGTAGCTGATGAGAAACAGTGTTTTGGGGGTTGAATCTTGTATCTGCTGCAACCATGTATATTTCATGCCATATCGCATCACTGCTTGCGTAGCATGGAAGAATTGGACCTGAA]


>consensus_3090#0 GCCCTGCGGTTTCGCCGGCGAAACGAGGCCGACCTAAACCCTCCGCCGCCGCCGCCGCCG TCGCCGGGGAAGAAGAGAGATGGGGGTGGGGGGAAGCTTCTGGGACCTGCTCAAGCCGTA CGCGCGGCACGAGGGCGCGGGGTACCTCCGCGGCCGCCGCGTCGCCGTCGACCTCTCCTT CTGGGTCGTCTCCCACAGCGCCGCCATCCGGGCGCGCTCGCCGCACGCGCGCCTCCCCCA TCTCCGCACCCTCTTCTTCCGCACCCTCTCCCTCTTCTCCAAGATGGGTGCTTTTCCTGT GTTCGTGGTGGACGGCCAGCCGTCGCCGCTCAAGTCGCAGGTGAGGGCCGCGCGATTCTT CAGAGGATCTGGAATGGACCTCGCTGCGCTGCCGAGCACGGAGGCGGAGGCCAGTGCGGA TGCGCTGGTTCAACCGAGGAATGCCAAGTTCACGCGATACGTGGAGGATTGCGTGGAACT GCTTGAATATCTTGGAATGCCTGTGCTGCGGGCAAAAGGTGAAGGTGAAGCTCTTTGTGC TCAGTTGAATAATCAAGGCCATGTAGATGCTTGCATCACTTCAGACAGTGACGCTTTCCT CTTTGGGGCTAAGACTGTCATAAAGGTTCTCCGATCGAATTGTAAGGAACCTTTTGAGTG CTACAACATGGCAGACATTGAGTCTGGTCTTGGACTAAAGAGGAAACAAATGGTAGCAAT GGCACTTCTTGTTGGCAGTGACCATGACTTGCATGGTGTGCCTGGTTTTGGTCCTGAGAC TGCACTTCGGTTTGTGCAGTTATTTGATGAAGATAATGTTCTAGCTAAATTATATGAAAT TGGTAAAGGGGTCTATCCATTTATAGGAGTTAGTGCGCCCAATATTGATGATCTCCCATC ACCCTCCACAAAGAGTCTACCGCGTGCGCGATCACCGCACTGCTCACATTGTGGTCACCC TGGCAACAAGAAAAATCATATCAAGGATGGGTGCAACTTTTGCTTGGTTGATTCATTAGA GAATTGTGTGGAGAAGCCAGCTGGATTCATATGTGAATGTCCTAGTTGTGACAAGGCACG TGATCTGAAGGTGCAGAGAAGAAATGAAAACTGGCAAATCAAGGTCTGTAAAAGGATAGC TGCTGAGACTAACTTTCCAAATGAGGAGATCATTAACTTGTACTTGAATGATGACAATTT GGATAATGAAAATGGTGTTCCATTGCTTACATGGAATAAACCTGATATGGAGATTTTGGT TGACTTCTTATCTTTCAAGCAGAACTGGGAGCCAGCGTATATTCGTCAGCGGATGCTTCC TATGCTATCAACCATATATTTACGCGAAATGGCTTCATCTCAATCTAAATCATTTCTTCT TTATGATCAATATAAATTTCATTCAATCCAACGGATTAAGATAAGATATGGTCACCCATA TTATTTGGTCAAGTGGAAGAGAGTCACTCGTAGTATGATATCCAATGATCCACCTAGCAA GCAGACAGAATTGGAGGGGAAGAATGATAAGGTGGAGGTATTGGATGGAGATGATGAGGT AGTAGATGAAGAGGAGGAGGAGCCTACAATGATTTCCGAAACTACTGAACTGCTAGATGA GCCAGATGTTCCACAAGTACTGGATGATGATAAAGATTGCTTTTTATTAACTGATGAAGA CATTGAGCTAGTGAATGCTGCATTTCCTGATGAAGCACAAAGATTTCAGGAAGAACAGAG GCTGAAAGAAGCAAAGTCAATAGCACGGAAATCCAAGCTCAACGTGGCAGGTTTCGAAAC ACCAAAAGGTCCAAGGCCTAGTGGAGTTCAGCTTAGCATCAAGGAGTTCTACCGCTCCAA GAAAGGGCTGAGTGGCGACTCAGGGAAGGACGGCTCAAGAAAATCCTCCGATGTGGACCT CAGCAAGAACTTGCCCAAGTCTGTCCGACGACGCCTCCTCTTCGACTGACTGACAATTGG TCTCCCTTCTGTCTTCCCAGTAGTCCTGCTGCTACTGTTGTACATGTTCCAGTAACATTT CTTTCGGCCAATGGATGTACATTGCGTGGCCCGGTTTTTGTACAGGGAACATGCATGTCT TGTAGCTGATGAGAAACAGTGTTTTGGGGGTTGAATCTTGTATCTGCTGCAACCATGTAT ATTTCATGCCATATCGCATCACTGCTTGCGTAGCATGGAAGAATTGGACCTGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)