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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3100 cluster # 3100       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3100#0 length = 538 sequences # 2  

consensusID : consensus_3100#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 538
fasta sequence
                              [AGGGGGGAGGATGGCAAGGCC-TTAAGATTGGTACCAGCTACAGTAAAGAAATTTCTGCTTTGGTCTTTCAATGATATTGTACATGCGTGTGTGCAACTGAACAACTGCCAGATAGCTGAGCAGTTATTACTANGAGGTAACAAATAGTCAAATACATACAGTTTTGTTGACTACTGCCTCTGGTCACATAAATATGTCATTTTGGAAATACATCAAGTAAAACCTTCTAAACTTTGATAACATTGTAATTTTGGGTTTTGCAAATATATTACAATANGAGATCAGTAGTCAAATTGCATTTTGGAGACTGTCGGTGTCCAAATGGCAAGCTCTTGTGACGGGAAGGGATGGAGCATGGCTGTAGCTATGTAACCATTTTTCTTTATGTCACTTTAATTATTTCTCTCATTTATCATATTTTGAGCATTTCTTTCTTCTTGATGGTTGTTGAAATCCAGTATGGCAATATTACTTTTTAGTTGATTTGTTTCATGTAATGTTCCTATTTGAGTTTAGTGTGTAGGACAGATAGCGTTTT]

[+] EMBL CA766409             [AGGGGGGAGGATGGCAAGGCC TTAAGATTGGTACCAGCTACAGTAAAGAAATTTCTGCTTTGGTCTTTCAATGATATTGTACATGCGTGTGTGCAACTGAACAACTGCCAGATAGCTGAGCAGTTATTACTANGAGGTAACAAATAGTCAAATACATACAGTTTTGTTGACTACTGCCTCTGGTCACATAAATATGTCATTTTGGAAATACATCAAGTAAAACCTTCTAAACTTTGATAACATTGTAATTTTGGGTTTTGCAAATATATTACAATANGAGATCAGTAGTCAAATTGCATTTTGGAGACTGTCGGTGTCCAAATGGCAAGCTCTTGTGACGGGAAGGGATGGAGCATGGCTGTAGCTATGTAACCATTTTTCTTTATGTCACTTTAATTATTTCTCTCATTTATCATATTTTGAGCATTTCTTTCTTCTTGATGGTTGTTGAAATCCAGTATGGCAATATTACTTTTTAGTTGATTTGTTTCATGTAATGTTCCTATTTGAGTTTAGTGTGTAGGACAGATAGCGTTTT]
[+] EMBL CA765414             [               AAGGCCATTAAGATTGGTACCAGCTACAGTAAAGAAATTTCTGCTTTGGTCTTTCAATGATATTGTACATGCGTGTGTGCAACTGAACAACTGCCAGATAGCTGAGCAGTTATTACTA GAGGTAACAAATAGTCAAATACATACAGTTTTGTTGACTACTGCCTCTGGTCACATAAATATGTCATTTTGGAAACACATCAAGTAAAACCTTCTAAACTTTGATAACATTGTAATTTTGGGTTTTGCAAATATATTACAATA GAGATCAGTAGTCAAATTGCATTTTGGAGACTGTCGGTGTCCAAATGGCAAGCTCTTGTGACGGGAAGGGATGGAGCATGGCTGTACCTATGTAACCATTTTTCTTTATGTCGCTTTAATTATTTCTCTCATTTATCATATTTTGAACATTTCTTTCTTCTTGATGGTTGTTGAAATCCAGTATGGCAATATTACTTTTTAGTTGATTTGTTTCATGTAATGTTCCTATTTGAGTTTAGTGTGTAGGACAGATAGCGT   ]


>consensus_3100#0 AGGGGGGAGGATGGCAAGGCCTTAAGATTGGTACCAGCTACAGTAAAGAAATTTCTGCTT TGGTCTTTCAATGATATTGTACATGCGTGTGTGCAACTGAACAACTGCCAGATAGCTGAG CAGTTATTACTANGAGGTAACAAATAGTCAAATACATACAGTTTTGTTGACTACTGCCTC TGGTCACATAAATATGTCATTTTGGAAATACATCAAGTAAAACCTTCTAAACTTTGATAA CATTGTAATTTTGGGTTTTGCAAATATATTACAATANGAGATCAGTAGTCAAATTGCATT TTGGAGACTGTCGGTGTCCAAATGGCAAGCTCTTGTGACGGGAAGGGATGGAGCATGGCT GTAGCTATGTAACCATTTTTCTTTATGTCACTTTAATTATTTCTCTCATTTATCATATTT TGAGCATTTCTTTCTTCTTGATGGTTGTTGAAATCCAGTATGGCAATATTACTTTTTAGT TGATTTGTTTCATGTAATGTTCCTATTTGAGTTTAGTGTGTAGGACAGATAGCGTTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)