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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3116 cluster # 3116       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3116#0 length = 1094 sequences # 2  

consensusID : consensus_3116#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1094
fasta sequence
                              [CAGTGGACTNAAAATAGCGGNCAAGAGACTAGAAACATGTTCTTTACAAGGNTTACTGGAGTTTCAAAATGAAACCCAACTTATAGCAAAGCTTCAACACAAAAATCTCGTCAAGCTGCTGGGCTGCTGCACTCAAGGAGATCAAGAAAAAATTCTTGTATATGAATATATGGGAAACAAAAGCCTAGACTACTTCATCTTTAGTGAGCCCTTTATTTTCTATGTGCTCGAATGTGATGCTGTTTATAATTTATACTAAATGTTAACTAATAATTGCAAATGTTCTGCAGGTAATGTAAAGGGAGCACAACTAAACTGGTCTAAACGTCTTCACATAATTGATGGGATAGGGCAAGGACTTCTTTATCTTCACAACTTTTTACGGTTATGTGTTGTTCATCGGGATTTGAAAGCCAGTAACATTCTCTTGGATAGTACTATGAATCCAAAAATATCTGATTTTGGGATGGNCAGAATATTCTATTCAAATATGGCAGAGTCCAATACCACCAGAATAGTGGGCACACAGTAAGAACATAGTAGCACATCCATTTTGGTGCGCATCATATTGAGATTTGAGATATGCTTCTTTCTTCTTCTTTTNGGGGGTGGGNGGTTTTTCCTTGGGGGAGGGGGGGCATGCATGAAGCATCCAATCAGCAATATTTTAAATTCTATCTTTTTCATCAGNGACAAGTATCGAATTTGCTTCCGNTCACACAGGGGGCTACATACCCTTCCGGNGTATGCNTTTGANGGGGGTTTGCTCAATCAAAGNCNAAATGGGGTTAAGCTTCGGGGGGGTAATTTTTGAAATAGTAAGTGGGGAAGAGGACAGCCCACTTCTATCAACACAATGGAAAGCTATATAATCTCATTTCATTTGTGAGTACTGATACCCCAAATCCTGATTTACCTTTTTCTATCATACCAGNTGGTTTCTATAATGGAAGTGCGCATGACACTTANTTTAACGAAAGCNCACTATTCTGGTATTAAGGCTTAACCAACTTTGGAAAGATGGAAAATGGGGNGATCCTGATTTATTATCCTNCAGGGAATNAACATCAAGAGATAGNAAAGGGGCCATTCAT]

[+] EMBL CA765496             [CAGTGGACTNAAAATAGCGGNCAAGAGACTAGAAACATGTTCTTTACAAGGNTTACTGGAGTTTCAAAATGAAACCCAACTTATAGCAAAGCTTCAACACAAAAATCTCGTCAAGCTGCTGGGCTGCTGCACTCAAGGAGATCAAGAAAAAATTCTTGTATATGAATATATGGGAAACAAAAGCCTAGACTACTTCATCTTTAGTGAGCCCTTTATTTTCTATGTGCTCGAATGTGATGCTGTTTATAATTTATACTAAATGTTAACTAATAATTGCAAATGTTCTGCAGGTAATGTAAAGGGAGCACAACTAAACTGGTCTAAACGTCTTCACATAATTGATGGGATAGGGCAAGGACTTCTTTATCTTCACAACTTTTTACGGTTATGTGTTGTTCATCGGGATTTGAAAGCCAGTAACATTCTCTTGGATAGTACTATGAATCCAAAAATATCTGATTTTGGGATGGNCAGAATATTCTATTCAAATATGGCAGAGTCCAATACCACCAGAATAGTGGGCACACAGTAAGAACATAGTAGCACATCCATTTTGGTGCGCATCATATTGAGATTTGAGATATGCTTCTTTCTTCTTCTTTTNGGGGGTGGGNGGTTTTTCCTTGGGGGAGGGGGGGCATGCATGAAGCATCCAATCAGCAATATTTTAAATTCTATCTTTTTCATCAGNGACAAGTATCGAATTTGCTTCCGNTCACACAGGGGGCTACATACCCTTCCGGNGTATGCNTTTGANGGGGGTTTGCTCAATCAAAGNCNAAATGGGGTTAAGCTTCGGGGGGGTAATTTTTG                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA765975             [                                                                                                                                                                                                                                                                                                                        AAACTGGTCTAAACGTCTTCACATAATTGATGGGATAGGGCAAGGACTTCTTTATCTTCACAACTTTTCACGGTTATGTGTTGTTCATCGGGATTTGAAAGCCAGTAACATTCTCTTGGATAGTACTATGAATCCAAAAATATCTGATTTTGGGATGGCCAGAATATTCTATTCAAATATGGCAGAGTCCAATACCACCAGAATAGTGGGCACACAGTAAGAACATAGTAGCACATCCATTTTGTTGCGCATCATATTGAGATTTGAGATATGCTTCTTTCTTCTTCTTTTGGGGGTTGTGTGTTTTTTCCTTGGGGGAGGGGGGGCATGCATGAAGCATCCAATCAGCAATA TTTAAATTCTATCTTTTTCATCAGTGACAAGTATCGAATTTGCTT CGTTCACACA GTGGCTACATACC  TCCGGAGTATGCATTTGA GGGGGTTTGCTCAATC AAGTC AGAT GTGTTTAGCTTCGGTGTGTTAATTTTGGAAATAGTAAGTGGGGAAGAGGACAGCCCACTTCTATCAACACAATGGAAAGCTATATAATCTCATTTCATTTGTGAGTACTGATACCCCAAATCCTGATTTACCTTTTTCTATCATACCAGNTGGTTTCTATAATGGAAGTGCGCATGACACTTANTTTAACGAAAGCNCACTATTCTGGTATTAAGGCTTAACCAACTTTGGAAAGATGGAAAATGGGGNGATCCTGATTTATTATCCTNCAGGGAATNAACATCAAGAGATAGNAAAGGGGCCATTCAT]


>consensus_3116#0 CAGTGGACTNAAAATAGCGGNCAAGAGACTAGAAACATGTTCTTTACAAGGNTTACTGGA GTTTCAAAATGAAACCCAACTTATAGCAAAGCTTCAACACAAAAATCTCGTCAAGCTGCT GGGCTGCTGCACTCAAGGAGATCAAGAAAAAATTCTTGTATATGAATATATGGGAAACAA AAGCCTAGACTACTTCATCTTTAGTGAGCCCTTTATTTTCTATGTGCTCGAATGTGATGC TGTTTATAATTTATACTAAATGTTAACTAATAATTGCAAATGTTCTGCAGGTAATGTAAA GGGAGCACAACTAAACTGGTCTAAACGTCTTCACATAATTGATGGGATAGGGCAAGGACT TCTTTATCTTCACAACTTTTTACGGTTATGTGTTGTTCATCGGGATTTGAAAGCCAGTAA CATTCTCTTGGATAGTACTATGAATCCAAAAATATCTGATTTTGGGATGGNCAGAATATT CTATTCAAATATGGCAGAGTCCAATACCACCAGAATAGTGGGCACACAGTAAGAACATAG TAGCACATCCATTTTGGTGCGCATCATATTGAGATTTGAGATATGCTTCTTTCTTCTTCT TTTNGGGGGTGGGNGGTTTTTCCTTGGGGGAGGGGGGGCATGCATGAAGCATCCAATCAG CAATATTTTAAATTCTATCTTTTTCATCAGNGACAAGTATCGAATTTGCTTCCGNTCACA CAGGGGGCTACATACCCTTCCGGNGTATGCNTTTGANGGGGGTTTGCTCAATCAAAGNCN AAATGGGGTTAAGCTTCGGGGGGGTAATTTTTGAAATAGTAAGTGGGGAAGAGGACAGCC CACTTCTATCAACACAATGGAAAGCTATATAATCTCATTTCATTTGTGAGTACTGATACC CCAAATCCTGATTTACCTTTTTCTATCATACCAGNTGGTTTCTATAATGGAAGTGCGCAT GACACTTANTTTAACGAAAGCNCACTATTCTGGTATTAAGGCTTAACCAACTTTGGAAAG ATGGAAAATGGGGNGATCCTGATTTATTATCCTNCAGGGAATNAACATCAAGAGATAGNA AAGGGGCCATTCAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)