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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3125 cluster # 3125       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3125#0 length = 967 sequences # 2  

consensusID : consensus_3125#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 967
fasta sequence
                              [ATCTCTGGATTGTCATCACAATTTTTTTCTTTTGTCTAGCTTCTCTACTTGCGAGGTTGATCACGATCAATAGGTCCTTGATTTCTTCACCATATCGTTGTTGCTGCCATCGTCACCGTTGTCACCACCACCACATCAAGGAGATTTGGTGTATAGTTTTTTTTTTAACAAATAAGTCGCCAGCTAGACATAGCTAGATAAGTCGCTGTCATCTTGCTCTCTTTGTTTGTGGAAGGTGGGTGAAGGAGAAGGAAGCAGATCAGATGGTGCGGCCGGGGAGAGGACAACGGCGGATCGATGCTGCCATTGACCATCTATCAGAGTATGGCTTTCCGAGGCCCATAATCCGTCAGACCATCAATGAACTCCTCGCGGACACGCTGTATGGGAGGAATGGGTGGGTCTTCCTAGAGGAAGGCTCCTACCGCATTGTGGTCGACAGACTACTCGAAAAACAGGCAAATCAGCAAGAGCAGCAGGAGGAAGATGCAA---AGCATGAAGGAGGAACTACTGCAATGGAGCCGCTTCCAGAGAATGGCATGCAAACCTCACAAGCTGAAGTGCCAGCTGCTGCATCTGAGCCAGCCAAAGTTGTAGCAGCAGTGGCCGATGAGATGCCCGATTCTACAACTTCAGTGCCACTCCCTATCACTGCAGCTAGACATACTGCCTCAACAAGGCGCCCATGCTATGGATGGCTTATTGAGAGTGAATCCGAGGATGATGAATTGGACAATGGGAGTGTCAGCTGNTGAGCAATCTAATCCTNCATCTGCTACGAATCATAAGATGAGTAAATGGATGGTCATATGTTGAGCAAGCAAGGCCTTCAGTTGCTNTGAGACATGAAAGGGAACCAGATACTCATCATAGAGGGATGCTCTCAAAGAGGAGGCGGCCGAGCGGATGGGATGTGCGCCCATCCTATTAAGATGGTGNTGGTTCATTCTAATCATAAAAACAATAA]

[+] EMBL CA765541             [ATCTCTGGATTGTCATCACAATTTTTTTCTTTTGTCTAGCTTCTCTACTTGCGAGGTTGATCACGATCAATAGGTCCTTGATTTCTTCACCATATCGTTGTTGCTGCCATCGTCACCGTTGTCACCACCACCACATCAAGGAGATTTGGTGTATAGTTTTTTTTTTAACAAATAAGTCGCCAGCTAGACATAGCTAGATAAGTCGCTGTCATCTTGCTCTCTTTGTTTGTGGAAGGTGGGTGAAGGAGAAGGAAGCAGATCAGATGGTGCGGCCGGGGAGAGGACAACGGCGGATCGATGCTGCCATTGACCATCTATCAGAGTATGGCTTTCCGAGGCCCATAATCCGTCAGACCATCAATGAACTCCTCGCGGACACGCTGTATGGGAGGAATGGGTGGGTCTTCCTAGAGGAAGGCTCCTACCGCATTGTGGTCGACAGACTACTCGAAAAACAGGCAAATCAGCAAGAGCAGCAGGAGGAAGATGCAA   AGCATGAAGGAGGAACTACTGCAATGGAGCCGCTTCCAGAGAATGGCATGCAAACCTCACAAGCTGAAGTGCCAGCTGCTGCATCTGAGCCAGCCAAAGTTGTAGCAGCAGTGGCCGATGAGATGCCCGATTCTACAACTTCAGTGCCACTCCCTATCACTGCAGCTAGACATACTGCCTCAACAAGGCGCCCATGCTATGGATGGCTTATTGAGAGTGAATCCGAGGATGATGAATTGGACAATGGGAGTGTCAGCTGNTGAGCAATCTAATCCTNCATCTGCTACGAATCATAAGATGAGTAAATGGATGGTCATATGTTGAGCAAGCAAGGCCTTCAGTTGCTNTGAGACATGAAAGG                                                                                                                  ]
[+] EMBL CB096524             [                                                                                                                                                                                                                                                                                                        GATGTTGCCATTGACCATCTATCNGAGTATGGCTTTCCGAGGCCCATAATCCGTCAGACCATCAATGAACTCCTCGCGGACACGCTGTATGGGAGGAATGGGTGGGTCTTCCTAGAGGAAGGCTCCTACCGCATTGTGGTCGACAGACTACTCGAAAAACAGGCAAATCAGCAAGAGCAGCAGGAGGAAGATGCAAAGCAGCATGAAGGAGGAACTACTGCAATGGAGCCGCTTCCAGAGAATGGCATGCAAACCTCACAAGCTGAAGTGCCAGCTGCTGCACCTGAGCCAGCCAAAGTTGTAGCAGCAGTGGCCGATGAGATGCCCGATTCTACAACTTCAGTGCCACTCCCTATCACTGCAGCTAGACATACTGCCTCAACAAGGCGCCCATGCTATGGATGGCTTATTGAGAGTGAATCCGAGGATGATGAATTGGACAAT GGAGTGTCAGCTGTTGAGCAATCTAATCCTCCATCTGCTACGAATCATAAGATGAGT AATGGATGGTCATATGTTGAGCAAGCAAGGCCTTCAGTTGCTATGAGACATGAAATGGAACCAGATACTCATCATAGAGGGATGCTCTCAAAGAGGAGGCGGCCGAGCGGATGGGATGTGCGCCCATCCTATTAAGATGGTGNTGGTTCATTCTAATCATAAAAACAATAA]


>consensus_3125#0 ATCTCTGGATTGTCATCACAATTTTTTTCTTTTGTCTAGCTTCTCTACTTGCGAGGTTGA TCACGATCAATAGGTCCTTGATTTCTTCACCATATCGTTGTTGCTGCCATCGTCACCGTT GTCACCACCACCACATCAAGGAGATTTGGTGTATAGTTTTTTTTTTAACAAATAAGTCGC CAGCTAGACATAGCTAGATAAGTCGCTGTCATCTTGCTCTCTTTGTTTGTGGAAGGTGGG TGAAGGAGAAGGAAGCAGATCAGATGGTGCGGCCGGGGAGAGGACAACGGCGGATCGATG CTGCCATTGACCATCTATCAGAGTATGGCTTTCCGAGGCCCATAATCCGTCAGACCATCA ATGAACTCCTCGCGGACACGCTGTATGGGAGGAATGGGTGGGTCTTCCTAGAGGAAGGCT CCTACCGCATTGTGGTCGACAGACTACTCGAAAAACAGGCAAATCAGCAAGAGCAGCAGG AGGAAGATGCAAAGCATGAAGGAGGAACTACTGCAATGGAGCCGCTTCCAGAGAATGGCA TGCAAACCTCACAAGCTGAAGTGCCAGCTGCTGCATCTGAGCCAGCCAAAGTTGTAGCAG CAGTGGCCGATGAGATGCCCGATTCTACAACTTCAGTGCCACTCCCTATCACTGCAGCTA GACATACTGCCTCAACAAGGCGCCCATGCTATGGATGGCTTATTGAGAGTGAATCCGAGG ATGATGAATTGGACAATGGGAGTGTCAGCTGNTGAGCAATCTAATCCTNCATCTGCTACG AATCATAAGATGAGTAAATGGATGGTCATATGTTGAGCAAGCAAGGCCTTCAGTTGCTNT GAGACATGAAAGGGAACCAGATACTCATCATAGAGGGATGCTCTCAAAGAGGAGGCGGCC GAGCGGATGGGATGTGCGCCCATCCTATTAAGATGGTGNTGGTTCATTCTAATCATAAAA ACAATAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)