cluster # 3135

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Oryza sativa
cluster # 3135 cluster # 3135 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3135#0 length = 639 sequences # 2

consensusID : consensus_3135#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 639
fasta sequence

                              [TGTTTGATGTCACCTCGCGTCTCACGTACAAGAACGTTCCCACTTGGCACAAGGACATCTGCAGGTTCTGCGACAACATACCGATCGTGCTGTGCGGCAACAA-GTGGACATGAAGAACAGGCAGGTGAAGGCCAAGATGNTGACCTTCCACAGGAAGAAGAACCTCCAGTATTACGAGATCTCTGCCAAGAGCAACTACAA-TTCGAGAAGCCTTTCCTCTACCTTGCCAGGAAGCTCACAGGGGACATGA--CTTCGGTTCGTCGAGGAGTTGGCCCTCNTCCCCGCCGACGTCACCATCGACCTCATCGCGCAGCAAAAGATTGAGACAGAGATAGCTGCTGCTGCGGCGATGCCTCTCCCGGACGAGGACGAGGATGGACTGATGGACTGAGCTCATCGGAGGCCATGCTTAGATTAGGACTCGAACTTTAGGTGATCATGATAGACTTGTTAATGGCCGTGTTAAGAAATTCAGTAGAGTAGGATGAAGCTGGTTTAGTATTTGTTTCTGAGGTTGCTCCTGGCGTTACTGGATGAATGAATCAACGCGAATGCTCTTCTAGTCTGCTGTGTAAATTTCTTTACTGGAGTAATGAAATAAGGTTGGATTTATTCAGTTTTATTAAAAAAAAAAAAAAA]

[+] EMBL AU085726             [TGTTTGATGTCACCTCGCGTCTCACGTACAAGAACGTTCCCACTTGGCACAAGGACATCTGCAGGTTCTGCGACAACATACCGATCGTGCTGTGCGGCAACAA GTGGACATGAAGAACAGGCAGGTGAAGGCCAAGATGNTGACCTTCCACAGGAAGAAGAACCTCCAGTATTACGAGATCTCTGCCAAGAGCAACTACAA TTCGAGAAGCCTTTCCTCTACCTTGCCAGGAAGCTCACAGGGGACATGA  CTTCGGTTCGTCGAGGAGTTGGCCCTCNTCCCCGCCGACGTCACCATCGACCTCATCGCGCAGCAAAAGATTGAGACAGAGATAGCTGCTGCTGCGGCGATGCCTCTCCCGGACGAGGACGAGGATGGACTGATGGACTGAGCTCATCGGAGGCCATGCTTAGATTAGGACTCGAACTTTAGGTGATCATGATAGACTTGTTAATGGCCGTGTTAAGAAATTCAGTAGAGTAGGATGAAGCTGGTTTAGTATTTGTTTCTGAGGTTGCTCCTGGCGTTACTGGATGAATGAATCAACGCGAATGCTCTTCTAGTCTGCTGTGTAAATTTCTTTACTGGAGTAATGAAATAAGGTTGGATTTATTCAGTTTTATTAAAAAAAAAAAAAAA]
[+] EMBL C27501               [TGTTTNATGTCACCTCGCGTCTCACGTACAAGAACGTTCCCACCTGGCACAAGGACATCTGCAGGGTCTGCNACAACATACCGATCGTGCTGTGCGGCAACAAGGTGGACATGAAGAACAGGCAGGTGAAGGCCAAGATGGTGACCTTCCACAGGAAGAAGAACCTCCAGTATTACGAGATCTCTGCCAAGAGCAACTACAACTTCGAGAAGCCTTTCCTCTACCTTGCCAGGAAGCTCACAGGGGACATGAACCTTCGGTTCGTCGAGGAGTTGGCCCTNCTCCCCGNCGACGTCACCATC                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_3135#0
TGTTTGATGTCACCTCGCGTCTCACGTACAAGAACGTTCCCACTTGGCACAAGGACATCT
GCAGGTTCTGCGACAACATACCGATCGTGCTGTGCGGCAACAAGTGGACATGAAGAACAG
GCAGGTGAAGGCCAAGATGNTGACCTTCCACAGGAAGAAGAACCTCCAGTATTACGAGAT
CTCTGCCAAGAGCAACTACAATTCGAGAAGCCTTTCCTCTACCTTGCCAGGAAGCTCACA
GGGGACATGACTTCGGTTCGTCGAGGAGTTGGCCCTCNTCCCCGCCGACGTCACCATCGA
CCTCATCGCGCAGCAAAAGATTGAGACAGAGATAGCTGCTGCTGCGGCGATGCCTCTCCC
GGACGAGGACGAGGATGGACTGATGGACTGAGCTCATCGGAGGCCATGCTTAGATTAGGA
CTCGAACTTTAGGTGATCATGATAGACTTGTTAATGGCCGTGTTAAGAAATTCAGTAGAG
TAGGATGAAGCTGGTTTAGTATTTGTTTCTGAGGTTGCTCCTGGCGTTACTGGATGAATG
AATCAACGCGAATGCTCTTCTAGTCTGCTGTGTAAATTTCTTTACTGGAGTAATGAAATA
AGGTTGGATTTATTCAGTTTTATTAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case