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Oryza sativa
cluster # 3137 cluster # 3137       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3137#0 length = 3321 sequences # 2  
consensusID : consensus_3137#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3321
fasta sequence 
                              [GAGCGTCGCGCCCCCATCCCCTCCTCCCCGTGGCGGCGGCGGCGGCGGCGAGCCGGCGACTTCCCGCCGCCATGTCGGCCTGCGGTTACCACTCCCCGCGCTTCTCCGAGGACATTGCCTTTCTCCCTCAATGGCTACAGCCGCATCGGCCGCTGGCGGTTGGCGAGCACGGGAAGGACAGCGCCGCCGTTTCGTCGCCGTCTTGTGTGAATTGCGCGTTTATCGGAGGCCCTGCACAAGAGCAACATAGTTGTCTGAACACCATGGTGAATGCTGCTAGTTGCAGTGGGTTTAGCTTGCACTTGTCGGGGGATGAGGGCACGCCTACTGGAACTACTCCTAGCAATGGCAATGTAGTGCCTTTCTCTCTGCATCTTTCTTCAGAAAGTACTTCAAAACTATCCTCAACTCAAGCCAATGGTCTAAACTCTGTTACATGCAAAGATGTGTTAGGTGGCTTTTGTATTGATGACCAAGCACAAGAGATCAAGACAGTGCCGCAAAATCAATCGGAAGCCAAAGACCTTCGAGAAATTTGTAAAATGTCTAGCGAGGAAATCAATAAAACATGTGATTCAAAAGGACATAGAAGACAGCAACTGTCTGGACGAAAGGTTGATGTTCGGAAACTCCGTAGCGCGGATGTGAATGATGCAGTTGAACTATCAATCGCTGCCTCTGAAGCCATGGTTATTGCGGAAATGATACTTCTTGATTCTCAGTCTGATAAACTAGCTACAGCTTCCTTAGAAGCTGCTCTACATGTGAAAGAAGCTCGGAAACAGTGTTTTCTTGAGGAGCTAGAACATTCTTGTGGATCCTCTGAAAGTGATCTGGATGAGACTGATAGGCTTTCAGAATTAGATGAGACTGAAATGCTCGATGCATTTCAAGATGTTGGCCTATCTCTTGTTCAAACTGCTTGTGCATCTCAAGGTCAGAACATAAGTGGCCTGAAACAGGAAATCTCTCACGCTAGTTCTCACCCTTGTGATGCAGAAGCTCACGTATTAGAGAGCTCTCCTGAGAAGCAAAATATTAGATGGAACAGCCATGATGCTGATACTAATGACCATGTATCTGATTCTTTAGCAAGTCACAATAAGGAAGGTGGAGTAGTTGCTGTGCAGACAAATGTTGGTACAAGGAAGCATGTAAAGGGATTATTCAATAAAGAAACTAGCTTCATTTCTGAGTCAATGGATGGCATGGATGAGTTCCCTTCTCCATCTAGAATTGCTTCCATGGAAATGGCTGCATCTTCAAGAGCTTCTTTTCTCCACAAAATTAAAGGTTCTTGTGAGGAAAACCAAGGTGCTGAAGCTGCACAGTTGTGCTCTCAAGTTGTATGTTCAAACTTGTCACTTGTGGATCCTCTTTGTTCCATTGTTCCATGTAGTATATCTTTCAACGAAGGCCCCCCTAGTCAGGCCCCTGAATGCATACAGAGTAAAGGGGATAAAGAATTGATCAGCACCAAAGAATTTCCATCAAAGCAAGATCTGGAGGGAGAAGCTGGTCCATCTTGCACACCAGTATCTAATATTCTGCTCAGGCGAAGGAAATACAGTTCTCTCAGACCTTTTAGCACAATAGCACCCAGACCATATGTATCAAAAAGTACTGAACCTCATAATGATGTTGATGAGGCAGTTTGTCAGCAGGGAAGTTTTGCAGCAGTAACTTTAAATAAAAAGATACGACGTGTGCAAGCCTCTAAAGTATGTGTAGAAAATAATTTTGAAGCTGGAAATTTGCACGAATTTTCTAAGGTTCTAAAGAATCCATCTTATGCTCAGGGGGTCAGTGAGCATCAAAACAGTATGAAGAGTCTTAAAAGAAAGAAAGCCCAATTTTCAGAAGCTAAAATTAGTACCAGGAAAACCAAGAATATTAGAAGGACGCAGACTAAATCTCGATTCAGCTGGTCAGATAGCAGACTCATTGACACAATCGAACCCAGGGAGTACATTGATAATAAAGAAGCCCTATTTCATGGACTGGATTTTTTGTTGACTGGATTTCAGAGTCACAAGGAAAAGGAAATTGAGCCATTGATCCGAAAATTTGGAGGCTATGTTCTTTCTAGAGTGCCATCCTGTCCACTTGATAAAAGAAGCAAGCTGGCAGAGCTTGCTAGGTGCAAGCCTCCCATTGTTCTTTCTCCTAAAAAGGTATCAACGGCTAAGTTCTTATATGGCTGTGCTATCAACTCCTGGATTTTGAATCCCAGTTGGCTTTTTGATTCTATTCAAGCTGGTGTCATGTTGCCACCTGGAAAGTATTTTATTCGACAAGTGCATTCAATGCAGGGTATTTCAATGTTTGACCAGTCACTGCACCTAAGAAAGAATACATTGTTATTTGATGGGGTAGGATTCTTAATCCTTGGAAAAATCAGCTTCTGTTCCAAATTTTCCAACGTTATCAAGCATGGAGGTGGCCAAGTTTTTGCATCTCTTCAGGGATTAGTTCAAAGCTTGAAGGATAGAAGCTCTTCACATGGAATCATTCTCGTAGCAAGTGAGGCGAGCGCATCACGCCATCTAAGCTATTGTGGGCTTGAGCATGACATAAAAACAGCGCCGGCGAGCTGGGTCATTGGCAGTCTATATTCTGGTAAACTGATTCCTCTGAAGAAAGATCGATGTGCCTCATTCCGCAAAATCAAGATGCCATCATTCCAACAACCGCAAGCATTTGACATGAGCCAAGAAATTTGATGATTCAGATCTGTTGCTTAGCTACCATCACATAAGAAACTGACCAATTCTTACTGATACATACTTACCAGGGATCCAGTATCCTCTTTCTGCAACAGTTTTCAAGAGCATGTGTGATAATGGGACTCATCTGTGGTGCGCTCATGCTGATGCTTATCGCTGGCAACCTTTGGAGT-GTGGAGTGCCATATATCCATTTTTCTCTTTCCAAATACCAAAAGGCGACTGATGTCAAAGCATCTCGAGAAATATATGGTTGACTGCTAACTTGAAATATGCCA-GGTCAT-GTTTCACTTGAAATATA-TCCATACTGTCTCTTTCACT-GGGGAATGTTGTTCATTTCTGAAGATCATGTTATTCTGGGGAGTGTTGTTCGTTTCTGAAGACGTGAAGATCATGATATTGTTGTAAATGCAACAGTTTTTCTCATTCGTACACTTGGCCCGGAAAAAAAAATCATGATATTCAGGGTAGAGAATGTTTCTGTTTGTTGTCTGTTGTAATTTGTAAATACGGATACCTGAGAAAACACACCTCTCACTTGCAATATCGAGTGATTCGCATATCTATCATGCCATCAAAATTGGAAGGCATCGATT]

[+] EMBL AK069532             [GAGCGTCGCGCCCCCATCCCCTCCTCCCCGTGGCGGCGGCGGCGGCGGCGAGCCGGCGACTTCCCGCCGCCATGTCGGCCTGCGGTTACCACTCCCCGCGCTTCTCCGAGGACATTGCCTTTCTCCCTCAATGGCTACAGCCGCATCGGCCGCTGGCGGTTGGCGAGCACGGGAAGGACAGCGCCGCCGTTTCGTCGCCGTCTTGTGTGAATTGCGCGTTTATCGGAGGCCCTGCACAAGAGCAACATAGTTGTCTGAACACCATGGTGAATGCTGCTAGTTGCAGTGGGTTTAGCTTGCACTTGTCGGGGGATGAGGGCACGCCTACTGGAACTACTCCTAGCAATGGCAATGTAGTGCCTTTCTCTCTGCATCTTTCTTCAGAAAGTACTTCAAAACTATCCTCAACTCAAGCCAATGGTCTAAACTCTGTTACATGCAAAGATGTGTTAGGTGGCTTTTGTATTGATGACCAAGCACAAGAGATCAAGACAGTGCCGCAAAATCAATCGGAAGCCAAAGACCTTCGAGAAATTTGTAAAATGTCTAGCGAGGAAATCAATAAAACATGTGATTCAAAAGGACATAGAAGACAGCAACTGTCTGGACGAAAGGTTGATGTTCGGAAACTCCGTAGCGCGGATGTGAATGATGCAGTTGAACTATCAATCGCTGCCTCTGAAGCCATGGTTATTGCGGAAATGATACTTCTTGATTCTCAGTCTGATAAACTAGCTACAGCTTCCTTAGAAGCTGCTCTACATGTGAAAGAAGCTCGGAAACAGTGTTTTCTTGAGGAGCTAGAACATTCTTGTGGATCCTCTGAAAGTGATCTGGATGAGACTGATAGGCTTTCAGAATTAGATGAGACTGAAATGCTCGATGCATTTCAAGATGTTGGCCTATCTCTTGTTCAAACTGCTTGTGCATCTCAAGGTCAGAACATAAGTGGCCTGAAACAGGAAATCTCTCACGCTAGTTCTCACCCTTGTGATGCAGAAGCTCACGTATTAGAGAGCTCTCCTGAGAAGCAAAATATTAGATGGAACAGCCATGATGCTGATACTAATGACCATGTATCTGATTCTTTAGCAAGTCACAATAAGGAAGGTGGAGTAGTTGCTGTGCAGACAAATGTTGGTACAAGGAAGCATGTAAAGGGATTATTCAATAAAGAAACTAGCTTCATTTCTGAGTCAATGGATGGCATGGATGAGTTCCCTTCTCCATCTAGAATTGCTTCCATGGAAATGGCTGCATCTTCAAGAGCTTCTTTTCTCCACAAAATTAAAGGTTCTTGTGAGGAAAACCAAGGTGCTGAAGCTGCACAGTTGTGCTCTCAAGTTGTATGTTCAAACTTGTCACTTGTGGATCCTCTTTGTTCCATTGTTCCATGTAGTATATCTTTCAACGAAGGCCCCCCTAGTCAGGCCCCTGAATGCATACAGAGTAAAGGGGATAAAGAATTGATCAGCACCAAAGAATTTCCATCAAAGCAAGATCTGGAGGGAGAAGCTGGTCCATCTTGCACACCAGTATCTAATATTCTGCTCAGGCGAAGGAAATACAGTTCTCTCAGACCTTTTAGCACAATAGCACCCAGACCATATGTATCAAAAAGTACTGAACCTCATAATGATGTTGATGAGGCAGTTTGTCAGCAGGGAAGTTTTGCAGCAGTAACTTTAAATAAAAAGATACGACGTGTGCAAGCCTCTAAAGTATGTGTAGAAAATAATTTTGAAGCTGGAAATTTGCACGAATTTTCTAAGGTTCTAAAGAATCCATCTTATGCTCAGGGGGTCAGTGAGCATCAAAACAGTATGAAGAGTCTTAAAAGAAAGAAAGCCCAATTTTCAGAAGCTAAAATTAGTACCAGGAAAACCAAGAATATTAGAAGGACGCAGACTAAATCTCGATTCAGCTGGTCAGATAGCAGACTCATTGACACAATCGAACCCAGGGAGTACATTGATAATAAAGAAGCCCTATTTCATGGACTGGATTTTTTGTTGACTGGATTTCAGAGTCACAAGGAAAAGGAAATTGAGCCATTGATCCGAAAATTTGGAGGCTATGTTCTTTCTAGAGTGCCATCCTGTCCACTTGATAAAAGAAGCAAGCTGGCAGAGCTTGCTAGGTGCAAGCCTCCCATTGTTCTTTCTCCTAAAAAGGTATCAACGGCTAAGTTCTTATATGGCTGTGCTATCAACTCCTGGATTTTGAATCCCAGTTGGCTTTTTGATTCTATTCAAGCTGGTGTCATGTTGCCACCTGGAAAGTATTTTATTCGACAAGTGCATTCAATGCAGGGTATTTCAATGTTTGACCAGTCACTGCACCTAAGAAAGAATACATTGTTATTTGATGGGGTAGGATTCTTAATCCTTGGAAAAATCAGCTTCTGTTCCAAATTTTCCAACGTTATCAAGCATGGAGGTGGCCAAGTTTTTGCATCTCTTCAGGGATTAGTTCAAAGCTTGAAGGATAGAAGCTCTTCACATGGAATCATTCTCGTAGCAAGTGAGGCGAGCGCATCACGCCATCTAAGCTATTGTGGGCTTGAGCATGACATAAAAACAGCGCCGGCGAGCTGGGTCATTGGCAGTCTATATTCTGGTAAACTGATTCCTCTGAAGAAAGATCGATGTGCCTCATTCCGCAAAATCAAGATGCCATCATTCCAACAACCGCAAGCATTTGACATGAGCCAAGAAATTTGATGATTCAGATCTGTTGCTTAGCTACCATCACATAAGAAACTGACCAATTCTTACTGATACATACTTACCAGGGATCCAGTATCCTCTTTCTGCAACAGTTTTCAAGAGCATGTGTGATAATGGGACTCATCTGTGGTGCGCTCATGCTGATGCTTATCGCTGGCAACCTTTGGAGT GTGGAGTGCCATATATCCATTTTTCTCTTTCCAAATACCAAAAGGCGACTGATGTCAAAGCATCTCGAGAAATATATGGTTGACTGCTAACTTGAAATATGCCA GGTCAT GTTTCACTTGAAATATA TCCATACTGTCTCTTTCACT GGGGAATGTTGTTCATTTCTGAAGATCATGTTATTCTGGGGAGTGTTGTTCGTTTCTGAAGACGTGAAGATCATGATATTGTTGTAAATGCAACAGTTTTTCTCATTCGTACACTTGGCCCGGAAAAAAAAATCATGATATTCAGGGTAGAGAATGTTTCTGTTTGTTGTCTGTTGTAATTTGTAAATACGGATACCTGAGAAAACACACCTCTCACTTGCAATATCGAGTGATTCGCATATCTATCATGCCATCAAAATTGGAAGGCATCGATT]
[+] EMBL CA765597             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCGACAAGTGCATGCAATGCAGGGTATTTCAATGTTTGACCAGTCACTGCACCTAAGAAAGAATACATTGTTATTTGATGGGGTAGGATTCTTAATCCTTGGAAAAATCAGCTTCTGTTCCAAATTTTCCAACGTTATCAAGCATGGAGGTGGCCAAGTTTTTGCATCTCTTCAGGGATTAGTTCAAAGCTTGAAGGATAGAAGCTCTTCACATGGAATCATTCTCGTAGCAAATGAGGCCAGCGCATCACGCCATCTAAGCTATTGTGGGCTTGAGCATGACATAAAAACAGCGCCGGCGAGCTGGGCCATTGGCAGTCTATATTCTGGTAAACTGATTCCTCTGAAGAAAGATCGATGTGCCTCATTCCGCAAAATCAAGATGCCATCATTCCAACAACCGCAAGCATTTGACATGAGCCAAGAAATTTGATGATTCAGATCTGTTGCTTAGCTACCATCACATAAGAAACTGACCAATTCTTACTGATACATACTTACCAGGGATCCAGTATCCTCTTTCTGCAACAGTTTTCAAGAGCATGTGTGATAATGGGACTCATCTGTGGTGCGCTCATGCTGATGCTTATCGCTGGCAACCTTTGGAGTGGTGGAGTGCCATATATCCATTTTTCTCTTTCCAAATACCAAAAGGCGACTGATGTCAAAGCATCTCGAGAAATATATGGTTGACTGCTAACTTGAAATATGCCAGGGTCATGGTTTCACTTGAAATATATTCCATACTGNCTCTTTCACTGGGGGAATGgt                                                                                                                                                                                                                                                                         ]




>consensus_3137#0
GAGCGTCGCGCCCCCATCCCCTCCTCCCCGTGGCGGCGGCGGCGGCGGCGAGCCGGCGAC
TTCCCGCCGCCATGTCGGCCTGCGGTTACCACTCCCCGCGCTTCTCCGAGGACATTGCCT
TTCTCCCTCAATGGCTACAGCCGCATCGGCCGCTGGCGGTTGGCGAGCACGGGAAGGACA
GCGCCGCCGTTTCGTCGCCGTCTTGTGTGAATTGCGCGTTTATCGGAGGCCCTGCACAAG
AGCAACATAGTTGTCTGAACACCATGGTGAATGCTGCTAGTTGCAGTGGGTTTAGCTTGC
ACTTGTCGGGGGATGAGGGCACGCCTACTGGAACTACTCCTAGCAATGGCAATGTAGTGC
CTTTCTCTCTGCATCTTTCTTCAGAAAGTACTTCAAAACTATCCTCAACTCAAGCCAATG
GTCTAAACTCTGTTACATGCAAAGATGTGTTAGGTGGCTTTTGTATTGATGACCAAGCAC
AAGAGATCAAGACAGTGCCGCAAAATCAATCGGAAGCCAAAGACCTTCGAGAAATTTGTA
AAATGTCTAGCGAGGAAATCAATAAAACATGTGATTCAAAAGGACATAGAAGACAGCAAC
TGTCTGGACGAAAGGTTGATGTTCGGAAACTCCGTAGCGCGGATGTGAATGATGCAGTTG
AACTATCAATCGCTGCCTCTGAAGCCATGGTTATTGCGGAAATGATACTTCTTGATTCTC
AGTCTGATAAACTAGCTACAGCTTCCTTAGAAGCTGCTCTACATGTGAAAGAAGCTCGGA
AACAGTGTTTTCTTGAGGAGCTAGAACATTCTTGTGGATCCTCTGAAAGTGATCTGGATG
AGACTGATAGGCTTTCAGAATTAGATGAGACTGAAATGCTCGATGCATTTCAAGATGTTG
GCCTATCTCTTGTTCAAACTGCTTGTGCATCTCAAGGTCAGAACATAAGTGGCCTGAAAC
AGGAAATCTCTCACGCTAGTTCTCACCCTTGTGATGCAGAAGCTCACGTATTAGAGAGCT
CTCCTGAGAAGCAAAATATTAGATGGAACAGCCATGATGCTGATACTAATGACCATGTAT
CTGATTCTTTAGCAAGTCACAATAAGGAAGGTGGAGTAGTTGCTGTGCAGACAAATGTTG
GTACAAGGAAGCATGTAAAGGGATTATTCAATAAAGAAACTAGCTTCATTTCTGAGTCAA
TGGATGGCATGGATGAGTTCCCTTCTCCATCTAGAATTGCTTCCATGGAAATGGCTGCAT
CTTCAAGAGCTTCTTTTCTCCACAAAATTAAAGGTTCTTGTGAGGAAAACCAAGGTGCTG
AAGCTGCACAGTTGTGCTCTCAAGTTGTATGTTCAAACTTGTCACTTGTGGATCCTCTTT
GTTCCATTGTTCCATGTAGTATATCTTTCAACGAAGGCCCCCCTAGTCAGGCCCCTGAAT
GCATACAGAGTAAAGGGGATAAAGAATTGATCAGCACCAAAGAATTTCCATCAAAGCAAG
ATCTGGAGGGAGAAGCTGGTCCATCTTGCACACCAGTATCTAATATTCTGCTCAGGCGAA
GGAAATACAGTTCTCTCAGACCTTTTAGCACAATAGCACCCAGACCATATGTATCAAAAA
GTACTGAACCTCATAATGATGTTGATGAGGCAGTTTGTCAGCAGGGAAGTTTTGCAGCAG
TAACTTTAAATAAAAAGATACGACGTGTGCAAGCCTCTAAAGTATGTGTAGAAAATAATT
TTGAAGCTGGAAATTTGCACGAATTTTCTAAGGTTCTAAAGAATCCATCTTATGCTCAGG
GGGTCAGTGAGCATCAAAACAGTATGAAGAGTCTTAAAAGAAAGAAAGCCCAATTTTCAG
AAGCTAAAATTAGTACCAGGAAAACCAAGAATATTAGAAGGACGCAGACTAAATCTCGAT
TCAGCTGGTCAGATAGCAGACTCATTGACACAATCGAACCCAGGGAGTACATTGATAATA
AAGAAGCCCTATTTCATGGACTGGATTTTTTGTTGACTGGATTTCAGAGTCACAAGGAAA
AGGAAATTGAGCCATTGATCCGAAAATTTGGAGGCTATGTTCTTTCTAGAGTGCCATCCT
GTCCACTTGATAAAAGAAGCAAGCTGGCAGAGCTTGCTAGGTGCAAGCCTCCCATTGTTC
TTTCTCCTAAAAAGGTATCAACGGCTAAGTTCTTATATGGCTGTGCTATCAACTCCTGGA
TTTTGAATCCCAGTTGGCTTTTTGATTCTATTCAAGCTGGTGTCATGTTGCCACCTGGAA
AGTATTTTATTCGACAAGTGCATTCAATGCAGGGTATTTCAATGTTTGACCAGTCACTGC
ACCTAAGAAAGAATACATTGTTATTTGATGGGGTAGGATTCTTAATCCTTGGAAAAATCA
GCTTCTGTTCCAAATTTTCCAACGTTATCAAGCATGGAGGTGGCCAAGTTTTTGCATCTC
TTCAGGGATTAGTTCAAAGCTTGAAGGATAGAAGCTCTTCACATGGAATCATTCTCGTAG
CAAGTGAGGCGAGCGCATCACGCCATCTAAGCTATTGTGGGCTTGAGCATGACATAAAAA
CAGCGCCGGCGAGCTGGGTCATTGGCAGTCTATATTCTGGTAAACTGATTCCTCTGAAGA
AAGATCGATGTGCCTCATTCCGCAAAATCAAGATGCCATCATTCCAACAACCGCAAGCAT
TTGACATGAGCCAAGAAATTTGATGATTCAGATCTGTTGCTTAGCTACCATCACATAAGA
AACTGACCAATTCTTACTGATACATACTTACCAGGGATCCAGTATCCTCTTTCTGCAACA
GTTTTCAAGAGCATGTGTGATAATGGGACTCATCTGTGGTGCGCTCATGCTGATGCTTAT
CGCTGGCAACCTTTGGAGTGTGGAGTGCCATATATCCATTTTTCTCTTTCCAAATACCAA
AAGGCGACTGATGTCAAAGCATCTCGAGAAATATATGGTTGACTGCTAACTTGAAATATG
CCAGGTCATGTTTCACTTGAAATATATCCATACTGTCTCTTTCACTGGGGAATGTTGTTC
ATTTCTGAAGATCATGTTATTCTGGGGAGTGTTGTTCGTTTCTGAAGACGTGAAGATCAT
GATATTGTTGTAAATGCAACAGTTTTTCTCATTCGTACACTTGGCCCGGAAAAAAAAATC
ATGATATTCAGGGTAGAGAATGTTTCTGTTTGTTGTCTGTTGTAATTTGTAAATACGGAT
ACCTGAGAAAACACACCTCTCACTTGCAATATCGAGTGATTCGCATATCTATCATGCCAT
CAAAATTGGAAGGCATCGATT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)