cluster # 3155

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Oryza sativa
cluster # 3155 cluster # 3155 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3155#0 length = 631 sequences # 2

consensusID : consensus_3155#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 631
fasta sequence

                              [TGCTTTTTTTTTTATCGATTTCACTTTCCCCATCTTCATCTCTCACCTCTGTCTCTCTCTCCACGCATCTCTCAATCACTGCAAAGCAGGAGCGCCGATTCAGTGGCTTCAACCATAAATTTTTGCTGCCAATAACAGCAATAAGCTCCCTGATATTACCCAGGTTTGCTTCCCATCATTTTTGTCAATTAATTTGGCTCCTGTTGCTAGCAGCA-ATCAGTCCTGGAAGCATTGGCAACAGTACGCAGCTATGGTTGCTGTAATCAGAGAAGTCAAGCACGCATGCATGAGCAGAAAATGGAAGAGACGAAGCTAGAGGGTTTGGGACTGATTCCAGAATCATCGGCCAATTCAATTTCAGTAGCTTGTGCTTTAGAAATCTTCCGTTGTGAAGACATTAGATGACTTGTCTCTGGTAGTTGGAGCATGTGGTTGTGTTCAATAGATAAATCATGCAAGGTGTAAAGACCAGAATCCCTATCTAAGGTAATTCCCATTCGGGCATCACAACCTGTTCTTGTCTCAGCTCGGGGAAGTTTTGTCAAGTGATCTCTCTTGTCCTGTGCTCGGTAGCCCTGATTGGAACATACAAATCTACATGATGTAACTACCTTGTCAATTTTACTTGTGT]

[+] EMBL AK062976             [TGCTTTTTTTTTTATCGATTTCACTTTCCCCATCTTCATCTCTCACCTCTGTCTCTCTCTCCACGCATCTCTCAATCACTGCAAAGCAGGAGCGCCGATTCAGTGGCTTCAACCATAAATTTTTGCTGCCAATAACAGCAATAAGCTCCCTGATATTACCCAGGTTTGCTTCCCATCATTTTTGTCAATTAATTTGGCTCCTGTTGCTAGCAGCA ATCAGTCCTGGAAGCATTGGCAACAGTACGCAGCTATGGTTGCTGTAATCAGAGAAGTCAAGCACGCATGCATGAGCAGAAAATGGAAGAGACGAAGCTAGAGGGTTTGGGACTGATTCCAGAATCATCGGCCAATTCAATTTCAGTAGCTTGTGCTTTAGAAATCTTCCGTTGTGAAGACATTAGATGACTTGTCTCTGGTAGTTGGAGCATGTGGTTGTGTTCAATAGATAAATCATGCAAGGTGTAAAGACCAGAATCCCTATCTAAGGTAATTCCCATTCGGGCATCACAACCTGTTCTTGTCTCAGCTCGGGGAAGTTTTGTCAAGTGATCTCTCTTGTCCTGTGCTCGGTAGCCCTGATTGGAACATACAAATCTACATGATGTAACTACCTTGTCAATTTTACTTGTGT]
[+] EMBL BI801533             [                     CACTTGCCCCATCTTCATCTCTCACCTCTGTCTCTCTCTCCACGCATCTCTCAATCACTGCAAAGCAGGAGCGCCGATTCAGTGGCTTCAACCATAAATTTTTGCTGCCCATAACAGCCATAAGCTCCCTGATATTACCCAGGTTTGCTTCCCATCATTTTTGTCAATTAATTTGGCTCCTGTTGCTAGCAGCACATCAGTCCTGGAAGCATTGGCAACAGTACGCCGCTATGGTTGCTGTAATCACAGAAGTCAAGCACGCATGCATGAGCAGAAAATGGAAGAGACGAAGCTAGAGGGTTTGGGACTGATTCCAGAATTATCGGCCAATTC ATTTCAGTAGCTTGTGCTTTAGAAATCTTCCGTTGTGAAGACATTAGATGACTTGTCTCTGGTAGTTGGAGCATGTGGTTGTGTTCAATAGATAAATCATGCAAGGTGTAAAGACCAGAATCCCTATCTAAGGTAATTCCCATTCGGGCATCACAAaaaaaaaa                                                                                                                 ]




>consensus_3155#0
TGCTTTTTTTTTTATCGATTTCACTTTCCCCATCTTCATCTCTCACCTCTGTCTCTCTCT
CCACGCATCTCTCAATCACTGCAAAGCAGGAGCGCCGATTCAGTGGCTTCAACCATAAAT
TTTTGCTGCCAATAACAGCAATAAGCTCCCTGATATTACCCAGGTTTGCTTCCCATCATT
TTTGTCAATTAATTTGGCTCCTGTTGCTAGCAGCAATCAGTCCTGGAAGCATTGGCAACA
GTACGCAGCTATGGTTGCTGTAATCAGAGAAGTCAAGCACGCATGCATGAGCAGAAAATG
GAAGAGACGAAGCTAGAGGGTTTGGGACTGATTCCAGAATCATCGGCCAATTCAATTTCA
GTAGCTTGTGCTTTAGAAATCTTCCGTTGTGAAGACATTAGATGACTTGTCTCTGGTAGT
TGGAGCATGTGGTTGTGTTCAATAGATAAATCATGCAAGGTGTAAAGACCAGAATCCCTA
TCTAAGGTAATTCCCATTCGGGCATCACAACCTGTTCTTGTCTCAGCTCGGGGAAGTTTT
GTCAAGTGATCTCTCTTGTCCTGTGCTCGGTAGCCCTGATTGGAACATACAAATCTACAT
GATGTAACTACCTTGTCAATTTTACTTGTGT

clustalw multiple alignements is not computed in this case