cluster # 3156

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Oryza sativa
cluster # 3156 cluster # 3156 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3156#0 length = 728 sequences # 2

consensusID : consensus_3156#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 728
fasta sequence

                              [TTTTTTTTTATCTATCTTTCTTTATTTGGAGAATGCTTGTAATTAGTTGAAATGATGGGGCAAGGGAGAAATACACATAAATGTGTTAGGTGTCGGTTGGGAAGCCCACATAGATGTTTGGATTTCTCAACCTACGCAGCCCAAGAGGCATTGATATGGAGGAATCAACTGTGGCAGTTTACGAACTGACACCTTTGAAACTCCACAAATGAAAAGACAGCTCGATGTATCGGCTCAAAACGAGCCGATGCATCGAGCCCCTCCCCATTACCCAAATCACACATCAGAAATCCACATACCACCATCAATCCATCCTACAACATCCCCAAATCACATAGGACAAATCACCATGGATCCATCCAACAACAACATCCCCGCACAAATCAAACATCATAAATCACAAAAATTCATTCTGAAATATTGGCAATCCAATTAGATTCCTACTCTCCACCATGAATAACCTGCAGTCACCATCGTGTTGGCCGGATCCAGTGTCTATCGTGCTGGGGCAGGGAGAGGAAGAGACAATCATCGCAACTGTTGTCGTGACGTGCAGAGAACAAGTAGAAGTCACCGCCACTGCACTAGGTAGAGGAAGAGGCGGTCGCCACAAAAGCCACGCAGGGGAGAGGAAGGAAGAGGCTACCGCGCGTGGATCTGGTTGTCCCGAGCTCGGGACTGGCCACCTCTGCTCTCCATGGACAGAGGGCGGCCGCCTCTGCCGCTGC]

[+] EMBL CF282395             [TTTTTTTTTATCTATCTTTCTTTATTTGGAGAATGCTTGTAATTAGTTGAAATGATGGGGCAAGGGAGAAATACACATAAATGTGTTAGGTGTCGGTTGGGAAGCCCACATAGATGTTTGGATTTCTCAACCTACGCAGCCCAAGAGGCATTGATATGGAGGAATCAACTGTGGCAGTTTACGAACTGACACCTTTGAAACTCCACAAATGAAAAGACAGCTCGATGTATCGGCTCAAAACGAGCCGATGCATCGAGCCCCTCCCCATTACCCAAATCACACATCAGAAATCCACATACCACCATCAATCCATCCTACAACATCCCCAAATCACATAGGACAAATCACCATGGATCCATCCAACAACAACATCCCCGCACAAATCAAACATCATAAATCACAAAAATTCATTCTGAAATATTGGCAATCCAATTAGATTCCTACTCTCCACCATGAATAACCTGCAGTCACCATCGTGTTGGCCGGATCCAGTGTCTATCGTGCTGGGGCAGGGAGAGGAAGAGACAATCATCGCAACTGTTGT                                                                                                                                                                                        ]
[-] EMBL CF299868             [                                                                                                                                                                                                                                                                                                                                                                                                                               AAATATTGGCAATCCAATTAGATTCCTACTCTCCACCATGAATAACCTGCAGTCGCCATCGTGTTGGCCGGATCCAGTGTCTATCGTGCTGGGGCAGGGAGAGGAAGAGACAATCATCGCAACTGTTGTCGTGACGTGCAGAGAACAAGTAGAAGTCACCGCCACTGCACTAGGTAGAGGAAGAGGCGGTCGCCACAAAAGCCACGCAGGGGAGAGGAAGGAAGAGGCTACCGCGCGTGGATCTGGTTGTCCCGAGCTCGGGACTGGCCACCTCTGCTCTCCATGGACAGAGGGCGGCCGCCTCTGCCGCTGC]




>consensus_3156#0
TTTTTTTTTATCTATCTTTCTTTATTTGGAGAATGCTTGTAATTAGTTGAAATGATGGGG
CAAGGGAGAAATACACATAAATGTGTTAGGTGTCGGTTGGGAAGCCCACATAGATGTTTG
GATTTCTCAACCTACGCAGCCCAAGAGGCATTGATATGGAGGAATCAACTGTGGCAGTTT
ACGAACTGACACCTTTGAAACTCCACAAATGAAAAGACAGCTCGATGTATCGGCTCAAAA
CGAGCCGATGCATCGAGCCCCTCCCCATTACCCAAATCACACATCAGAAATCCACATACC
ACCATCAATCCATCCTACAACATCCCCAAATCACATAGGACAAATCACCATGGATCCATC
CAACAACAACATCCCCGCACAAATCAAACATCATAAATCACAAAAATTCATTCTGAAATA
TTGGCAATCCAATTAGATTCCTACTCTCCACCATGAATAACCTGCAGTCACCATCGTGTT
GGCCGGATCCAGTGTCTATCGTGCTGGGGCAGGGAGAGGAAGAGACAATCATCGCAACTG
TTGTCGTGACGTGCAGAGAACAAGTAGAAGTCACCGCCACTGCACTAGGTAGAGGAAGAG
GCGGTCGCCACAAAAGCCACGCAGGGGAGAGGAAGGAAGAGGCTACCGCGCGTGGATCTG
GTTGTCCCGAGCTCGGGACTGGCCACCTCTGCTCTCCATGGACAGAGGGCGGCCGCCTCT
GCCGCTGC

clustalw multiple alignements is not computed in this case