cluster # 3168

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Oryza sativa
cluster # 3168 cluster # 3168 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3168#0 length = 824 sequences # 2

consensusID : consensus_3168#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 824
fasta sequence

                              [GAGACAAGGGGGAAGAAATNTGGT-CTATTTGGAAAATNCTAGATGCAAGATGGGACAGCAAGCTCAAAACTACATTGCACAAAGCTGGGTATTTCTTGAATCCGTGCTTCTTCTATGAGAATAAGAGAGAAATCAAGGAAGATTTCCTGATGCAAGCAGTTGTAGAATGTGCAACCTGCATGTATCGTGATGATATTACAGTGCAAGATATTTGTGTAGCTCAGCTTAGCCTGTACACTGAAGCCATGGATTCTTTTGGAACAACAATGGCTATTAGACAAAGAAATAGTCCAACAATCACCCCAGCAAATTGGTGGTCTGTACATGGAACTAGTGCTAAGGATTTGAGGAAGATGGCTATCAGGATTTTAAGTTTGACTTGTAGTTTCATTTGCATGCGAAAGAAATTGGAGTGCATTTGAGAGAGTCCATTCTAAGAAAAGAACTAGATTAGGCCACCGAAAATTGAATGCTCTGGTCTTTGTCATGTTCAACAAGAGGCTGAAATCAAAATATTCTCAAAAGGATAGGGATCCATTAGTTGCTAAATTTATAGATGATGATCCACCAAATGAATGGATTATAGATGATGATGCACCTGCACAACAACCAGAAGTTGATGCTCAGAGTGCAGCCTGTCAGTCGAAAGAGAAGATTAATACATAAAAAATCATCAAGTAAAGCAAAGAAAGCATGCGTTGTGGTCGAAGAGGAGGAGGAAG-AATTTCAATCTTCTAACAGTGAACATGAAGAGGAGGAAAATATTNCTTATGCAGATGGGTTCAAGNGACCATGAGCTTGATGACCGTTAGGNGAGAATGACC]

[+] EMBL CA765749             [GAGACAAGGGGGAAGAAATNTGGT CTATTTGGAAAATNCTAGATGCAAGATGGGACAGCAAGCTCAAAACTACATTGCACAAAGCTGGGTATTTCTTGAATCCGTGCTTCTTCTATGAGAATAAGAGAGAAATCAAGGAAGATTTCCTGATGCAAGCAGTTGTAGAATGTGCAACCTGCATGTATCGTGATGATATTACAGTGCAAGATATTTGTGTAGCTCAGCTTAGCCTGTACACTGAAGCCATGGATTCTTTTGGAACAACAATGGCTATTAGACAAAGAAATAGTCCAACAATCACCCCAGCAAATTGGTGGTCTGTACATGGAACTAGTGCTAAGGATTTGAGGAAGATGGCTATCAGGATTTTAAGTTTGACTTGTAGTTTCATTTGCATGCGAAAGAAATTGGAGTGCATTTGAGAGAGTCCATTCTAAGAAAAGAACTAGATTAGGCCACCGAAAATTGAATGCTCTGGTCTTTGTCATGTTCAACAAGAGGCTGAAATCAAAATATTCTCAAAAGGATAGGGATCCATTAGTTGCTAAATTTATAGATGATGATCCACCAAATGAATGGATTATAGATGATGATGCACCTGCACAACAACCAGAAGTTGATGCTCAGAGTGCAGCCTGTCAGTCGAAAGAGAAGATTAATACATAAAAAATCATCAAGTAAAGCAAAGAAAGCATGCGTTGTGGTCGAAGAGGAGGAGGAAG AATTTCAATCTTCTAACAGTGAACATGAAGAGGAGGAAAATATTNCTTATGCAGATGGGTTCAAGNGACCATGAGCTTGATGACCGTTAGGNGAGAATGACC]
[+] EMBL CB096615             [      aatgaGAAGAAATATGGTCCTATTTGGAAAATCATAGATGCAAGAT GGACAGCAAGCTCAAGACTACATTGCACAAAGCTGGGTATTTCTTGAATCCGAGCTTCTTCTATGAGAATAAGAGAGAAATCAAGGAAGATTTCCTGATGCAAGCAGTTGTAGAATGTGCAACCTGCATGTATCGTGATGATATTACAGTGCAAGATATTTGTGTAGCTCAGCTTAGCCTGTACACTGAAGCCATGGATTCTTTTGGAACAACAATGGCTATTAGACAAAGAAATAGTCCAACAATCACCCCAGCAAATTGGTGGTCTGTACATGGAACTAGTGCTAAGGATTTGAGGAAGATGGCTATCAGGATTTTAAGTTTGACTTGTAGTTTCATTTGCATGCGAAAGAAATTGGAGTGCATTTGAGAGAGTCCATTCTAAGAAAAGAACTAGATTAGGCCACCGAAAATTGAATGCTCTGGTCTTTGTCATGTTCAACAAGAGGCTGAAATCAAAATATTCTCAAAAGGATAGGGATCCATTAGTTGCTAAATTTATA   GATGATCCACCAAATGAATGGATTATAGATGATGATGCACCTGCACAACACCCAGAAGTTGATGCTCAGAGTGCAG CTGTCAGTCGAAAGAGAAGATTAATACATAAAAAATCATCAAGTAAAGCAAAGAAAGCATGCGTTGTGGTCGAAAAGGAGGAGGAAGAAATTTCAGTCTTCTAACAGNG ACATGAAGAGGAGG AAATATTNCTTATGCAGATGGGTTCAAGNGACCATGAGCTTGATGACCGTT              ]




>consensus_3168#0
GAGACAAGGGGGAAGAAATNTGGTCTATTTGGAAAATNCTAGATGCAAGATGGGACAGCA
AGCTCAAAACTACATTGCACAAAGCTGGGTATTTCTTGAATCCGTGCTTCTTCTATGAGA
ATAAGAGAGAAATCAAGGAAGATTTCCTGATGCAAGCAGTTGTAGAATGTGCAACCTGCA
TGTATCGTGATGATATTACAGTGCAAGATATTTGTGTAGCTCAGCTTAGCCTGTACACTG
AAGCCATGGATTCTTTTGGAACAACAATGGCTATTAGACAAAGAAATAGTCCAACAATCA
CCCCAGCAAATTGGTGGTCTGTACATGGAACTAGTGCTAAGGATTTGAGGAAGATGGCTA
TCAGGATTTTAAGTTTGACTTGTAGTTTCATTTGCATGCGAAAGAAATTGGAGTGCATTT
GAGAGAGTCCATTCTAAGAAAAGAACTAGATTAGGCCACCGAAAATTGAATGCTCTGGTC
TTTGTCATGTTCAACAAGAGGCTGAAATCAAAATATTCTCAAAAGGATAGGGATCCATTA
GTTGCTAAATTTATAGATGATGATCCACCAAATGAATGGATTATAGATGATGATGCACCT
GCACAACAACCAGAAGTTGATGCTCAGAGTGCAGCCTGTCAGTCGAAAGAGAAGATTAAT
ACATAAAAAATCATCAAGTAAAGCAAAGAAAGCATGCGTTGTGGTCGAAGAGGAGGAGGA
AGAATTTCAATCTTCTAACAGTGAACATGAAGAGGAGGAAAATATTNCTTATGCAGATGG
GTTCAAGNGACCATGAGCTTGATGACCGTTAGGNGAGAATGACC

clustalw multiple alignements is not computed in this case