cluster # 3174

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Oryza sativa
cluster # 3174 cluster # 3174 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3174#0 length = 923 sequences # 2

consensusID : consensus_3174#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 923
fasta sequence

                              [GTAATTTTGATCCATTTTTTGTTCTGACATTGCCCGTGCGTTTCTCGCTGCAGATGACGATGAATTTTCCGATGAGGAAGAACAGTCTATGGGAAAAAGGCTTTGGGAGGACGAAGACGCCGGCGACGACTTCGCCGCGGTGAAGGACACGTGGGACGACGACGACGACGTTAAACCTGGGAAGGAGACGGCCGCCACGGCGGCGAGCACGAAACCTCCTGCAACCAAAGGGAAGAAGAGCCAGGCCAACGCGAAGGCGAAGGCAGAAGCAGCAGACGCAACACCGAGTGAAACCTCTACCTCGAATGCCGCTGCTGAGATAGCTCAGAAGCGGCCTGACGACGACGAACCCATCGAGAAGTTCGTCCCAAAATCGGAGAAGGAATTCGCCGAGTACGCCGAGCGCATCGCGAAAGATCTTCTTAGACCTTACGAGAAAAGCTACCATTACATTGGTCTTATGAAGGCGATGAACAAGCTCGCCGTGGCGTCGCTGACGTCGACGAGCGTGAAGGAGATCGTGTCGTCCATGACGACGGTGGCCAACGAGAAGCTCAAGGCCGAGAAGGCGGCCGACGCCGGCAAGAAGAAGCCAGGGCAGAAGAAGAAGAGGCTTCACGTCAACAAGGCCGAAGGGCAAAAGTTTCGTGATGCTGACGACGACGACGACGACGATTGTCTATCATCTTAACTCACAAAGAGCCTCACAGTGAATGACAGACCTGCTCTGTTGTTCTGTTCTTGTGTCGAGATCCAGACTTAGTTGATTTCTGTTGGTTTTAATGTCAACTTAGTTGATTTCTATTGTTTTAATGTTTGATTTCTGATCATACATAAGTGTTCAGATGATCCTTTATGCCTCCTATCAAGTACCTACCATGCAAAATTTGCAAAAAAAAAAAAAAAAAAACACTGTCATGCCG]

[+] EMBL CF317272             [GTAATTTTGATCCATTTTTTGTTCTGACATTGCCCGTGCGTTTCTCGCTGCAGATGACGATGAATTTTCCGATGAGGAAGAACAGTCTATGGGAAAAAGGCTTTGGGAGGACGAAGACGCCGGCGACGACTTCGCCGCGGTGAAGGACACGTGGGACGACGACGACGACGTTAAACCTGGGAAGGAGACGGCCGCCACGGCGGCGAGCACGAAACCTCCTGCAACCAAAGGGAAGAAGAGCCAGGCCAACGCGAAGGCGAAGGCAGAAGCAGCAGACGCAACACCGAGTGAAACCTCTACCTCGAATGCCGCTGCTGAGATAGCTCAGAAGCGGCCTGACGACGACGAACCCATCGAGAAGTTCGTCCCAAAATCGGAGAAGGAATTCGCCGAGTACGCCGAGCGCATCGCGAAAGATCTTCTTAGACCTTACGAGAAAAGCTACCATTACATTGGTCTTATGAAGGCGATGAACAAGCTCGCCGTGGCGTCGCTGACGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF317273             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTACCATTACATTGGTCTTATGAAGGCGATGAACAAGCTCGCCGTGGCGTCGCTGACGTCGACGAGCGTGAAGGAGATCGTGTCGTCCATGACGACGGTGGCCAACGAGAAGCTCAAGGCCGAGAAGGCGGCCGACGCCGGCAAGAAGAAGCCAGGGCAGAAGAAGAAGAGGCTTCACGTCAACAAGGCCGAAGGGCAAAAGTTTCGTGATGCTGACGACGACGACGACGACGATTGTCTATCATCTTAACTCACAAAGAGCCTCACAGTGAATGACAGACCTGCTCTGTTGTTCTGTTCTTGTGTCGAGATCCAGACTTAGTTGATTTCTGTTGGTTTTAATGTCAACTTAGTTGATTTCTATTGTTTTAATGTTTGATTTCTGATCATACATAAGTGTTCAGATGATCCTTTATGCCTCCTATCAAGTACCTACCATGCAAAATTTGCAAAAAAAAAAAAAAAAAAACACTGTCATGCCG]




>consensus_3174#0
GTAATTTTGATCCATTTTTTGTTCTGACATTGCCCGTGCGTTTCTCGCTGCAGATGACGA
TGAATTTTCCGATGAGGAAGAACAGTCTATGGGAAAAAGGCTTTGGGAGGACGAAGACGC
CGGCGACGACTTCGCCGCGGTGAAGGACACGTGGGACGACGACGACGACGTTAAACCTGG
GAAGGAGACGGCCGCCACGGCGGCGAGCACGAAACCTCCTGCAACCAAAGGGAAGAAGAG
CCAGGCCAACGCGAAGGCGAAGGCAGAAGCAGCAGACGCAACACCGAGTGAAACCTCTAC
CTCGAATGCCGCTGCTGAGATAGCTCAGAAGCGGCCTGACGACGACGAACCCATCGAGAA
GTTCGTCCCAAAATCGGAGAAGGAATTCGCCGAGTACGCCGAGCGCATCGCGAAAGATCT
TCTTAGACCTTACGAGAAAAGCTACCATTACATTGGTCTTATGAAGGCGATGAACAAGCT
CGCCGTGGCGTCGCTGACGTCGACGAGCGTGAAGGAGATCGTGTCGTCCATGACGACGGT
GGCCAACGAGAAGCTCAAGGCCGAGAAGGCGGCCGACGCCGGCAAGAAGAAGCCAGGGCA
GAAGAAGAAGAGGCTTCACGTCAACAAGGCCGAAGGGCAAAAGTTTCGTGATGCTGACGA
CGACGACGACGACGATTGTCTATCATCTTAACTCACAAAGAGCCTCACAGTGAATGACAG
ACCTGCTCTGTTGTTCTGTTCTTGTGTCGAGATCCAGACTTAGTTGATTTCTGTTGGTTT
TAATGTCAACTTAGTTGATTTCTATTGTTTTAATGTTTGATTTCTGATCATACATAAGTG
TTCAGATGATCCTTTATGCCTCCTATCAAGTACCTACCATGCAAAATTTGCAAAAAAAAA
AAAAAAAAAACACTGTCATGCCG

clustalw multiple alignements is not computed in this case