cluster # 3186

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Oryza sativa
cluster # 3186 cluster # 3186 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3186#0 length = 1338 sequences # 2
consensusID : consensus_3186#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1338
fasta sequence
                              [GAGTGAGAATGGAAAGCAAAGAGGGCACATCCCCTATCGTGATAGTAAGTTGACGCGCATTTTACAACCTGCACTTGGAGGCAATGCAAAAACATCAATCATTTGCACTGCTGCTCCTGAGGAGATTCATGTTGAGGAAACCAGAGGAACTCTTCAATTTGCAAGTAGAGCAAAATGTGTCAGCAACTGTGCTCAAGTGAATGAGATTTTAACAGATGCAGCTCTGCTGAAGAGGCAAAAGCAGGAAATAGAAGAACTTCGCAAAAAGTTGCAGGGTTCTCATTCCGAAGTGTTGGAGCAGGTTATACTAAAGCAGCGCAATGACATGCACAAGTCTGAACTTGAGCGTGATCGACTAGCAATGGAACTTGACGAAGAAAGGAGGTTAAGGGAAACACTAGAGCACCGTTTGGCTGAGCAACAAAAAATGTTAGATGGCATTAGCAATACCAGCATATCACCAGATCAGTTCACTGATTCTATCCAGTTCGAATCATTAAAAACTCCAACTTCTAAAGAGAGACCAGCTGAGTTTGTTGCAAGTCGTGCGAACTATTCAAAGGATGTAGAATTCAGCCCAATACCAGAAAATTTAGGGACTGTAGCTGATGAGGACCTCTGGATGCAGCTGAACAAGGGGTGTGTTACTGATCTCGAAATGCTTGAGATGACACCTGGTTTCAAATGTGCGCCATCCCTGGCAGATGATAAAGCATCAGTTGCAACTCCAGACGAGGAACCAATCGACGCAAGATGCCAAAGGCTAGAGAAGGACTGCACCGCCGATAGGCAGCAGCTGGAGGATTCAAAGGCGTGGCGCGCGGCGCTCGAGGAGGAGCGCGACACGCTGAAGAGAGAAAACTCGTCCTTACTGGATGCGCTCGCCAAGGCGAGGCAGGACGCCGACCATCTCGTCGCCGACAGGCTGGAGGCGCTCAGGGAGCTGGACATGGAGAAGAGCAGGATGGATGAGCTCAAGCAGGAGATCAAGCTCTTCAGCCAGGCCTTCTCGCTGAGGCAGGGGCAGCTCACCTCCCTGTACACCAAGTCCAAGGCCATTGTGGAGAACTGCAAGACGTCCCAGTTGGCCTTGCCCTGATGTTTCTTCCTCTTCTTCTTCAGCAGCAACTGCAGAGAAGCGTGTTACGCATTCGATCCATCTGCAACCAATTCTTAAATTGCAGATTGTGTAGTGTATTTGTTTGCTGTACGTGTGTGCTGGATTAGATTGCGTGGTA-TTACGAGCCGTGTGCAAAGCTCCTGTGAAGTAGTAGTGTATA-CCGAAAAAAAAAACATTGCTATT--GTTTGTGATTTGGGGGGACAAAAAAAAAAAAAAAA]

[+] EMBL AK106372             [GAGTGAGAATGGAAAGCAAAGAGGGCACATCCCCTATCGTGATAGTAAGTTGACGCGCATTTTACAACCTGCACTTGGAGGCAATGCAAAAACATCAATCATTTGCACTGCTGCTCCTGAGGAGATTCATGTTGAGGAAACCAGAGGAACTCTTCAATTTGCAAGTAGAGCAAAATGTGTCAGCAACTGTGCTCAAGTGAATGAGATTTTAACAGATGCAGCTCTGCTGAAGAGGCAAAAGCAGGAAATAGAAGAACTTCGCAAAAAGTTGCAGGGTTCTCATTCCGAAGTGTTGGAGCAGGTTATACTAAAGCAGCGCAATGACATGCACAAGTCTGAACTTGAGCGTGATCGACTAGCAATGGAACTTGACGAAGAAAGGAGGTTAAGGGAAACACTAGAGCACCGTTTGGCTGAGCAACAAAAAATGTTAGATGGCATTAGCAATACCAGCATATCACCAGATCAGTTCACTGATTCTATCCAGTTCGAATCATTAAAAACTCCAACTTCTAAAGAGAGACCAGCTGAGTTTGTTGCAAGTCGTGCGAACTATTCAAAGGATGTAGAATTCAGCCCAATACCAGAAAATTTAGGGACTGTAGCTGATGAGGACCTCTGGATGCAGCTGAACAAGGGGTGTGTTACTGATCTCGAAATGCTTGAGATGACACCTGGTTTCAAATGTGCGCCATCCCTGGCAGATGATAAAGCATCAGTTGCAACTCCAGACGAGGAACCAATCGACGCAAGATGCCAAAGGCTAGAGAAGGACTGCACCGCCGATAGGCAGCAGCTGGAGGATTCAAAGGCGTGGCGCGCGGCGCTCGAGGAGGAGCGCGACACGCTGAAGAGAGAAAACTCGTCCTTACTGGATGCGCTCGCCAAGGCGAGGCAGGACGCCGACCATCTCGTCGCCGACAGGCTGGAGGCGCTCAGGGAGCTGGACATGGAGAAGAGCAGGATGGATGAGCTCAAGCAGGAGATCAAGCTCTTCAGCCAGGCCTTCTCGCTGAGGCAGGGGCAGCTCACCTCCCTGTACACCAAGTCCAAGGCCATTGTGGAGAACTGCAAGACGTCCCAGTTGGCCTTGCCCTGATGTTTCTTCCTCTTCTTCTTCAGCAGCAACTGCAGAGAAGCGTGTTACGCATTCGATCCATCTGCAACCAATTCTTAAATTGCAGATTGTGTAGTGTATTTGTTTGCTGTACGTGTGTGCTGGATTAGATTGCGTGGTA TTACGAGCCGTGTGCAAAGCTCCTGTGAAGTAGTAGTGTATA CCGAAAAAAAAAACATTGCTATT  GTTTGTGA                           ]
[+] EMBL CA765841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGATCTCGAAATGCTTGAGATGACACCTGGTTTCAAATGTGCAACATCCCTGGCAGATGATAAAGCATCAGTTGCAACTCCAGACGAGGAACCAATCGACGCAAGATGCCAAAGGCTAGAGAAGGACTGCACCGCCGATAGGCAGCAGCTGGAGGATTCAAAGGCGTGGCGCGCGGCGCTCGAGGAGGAGCGCGACACGCTGAAGAGAGAAAACTCGTCCTTACTGGATGCGCTCGCCAAGGCGAGGCAGGACGCCGACCGTCTCGTCGCCGACAGGCTGGAGGCGCTCAGGGAGCTGGACATGGAGAAGAGCAGGATGGATGAGCTCAAGCAGGAGATCAAGCTCTTCAGCCAGGCCTTCTCGCTGAGGCAGGGGCAGCTCACCTCCCTGTACACCAAGTCCAAGGCCATTGTGGAGAACTACAAGACGTCCCAGTTGGCCTTGCCCTGATGTTTCTTCCTCTTCTTCTTCAGCAGCAACTGCAGAGAAGCGTGTTACGCATTCGATCCATCTGCAACCAATTCTTAAATTGCAGATTGTGTAGTGTATTTGTTTGCTGTACGTGTGTGCTGGATTAAATTGCGTGGTATTTACGAGCCGTGTGCAAAGCTCCTGTGAAGTAGTAGTGGATACCCGAAAAAAAAAAAATTGCTATTTGGTTTGNGATTTGGGGGGACAAAAAAAAAAAAAAAA]




>consensus_3186#0
GAGTGAGAATGGAAAGCAAAGAGGGCACATCCCCTATCGTGATAGTAAGTTGACGCGCAT
TTTACAACCTGCACTTGGAGGCAATGCAAAAACATCAATCATTTGCACTGCTGCTCCTGA
GGAGATTCATGTTGAGGAAACCAGAGGAACTCTTCAATTTGCAAGTAGAGCAAAATGTGT
CAGCAACTGTGCTCAAGTGAATGAGATTTTAACAGATGCAGCTCTGCTGAAGAGGCAAAA
GCAGGAAATAGAAGAACTTCGCAAAAAGTTGCAGGGTTCTCATTCCGAAGTGTTGGAGCA
GGTTATACTAAAGCAGCGCAATGACATGCACAAGTCTGAACTTGAGCGTGATCGACTAGC
AATGGAACTTGACGAAGAAAGGAGGTTAAGGGAAACACTAGAGCACCGTTTGGCTGAGCA
ACAAAAAATGTTAGATGGCATTAGCAATACCAGCATATCACCAGATCAGTTCACTGATTC
TATCCAGTTCGAATCATTAAAAACTCCAACTTCTAAAGAGAGACCAGCTGAGTTTGTTGC
AAGTCGTGCGAACTATTCAAAGGATGTAGAATTCAGCCCAATACCAGAAAATTTAGGGAC
TGTAGCTGATGAGGACCTCTGGATGCAGCTGAACAAGGGGTGTGTTACTGATCTCGAAAT
GCTTGAGATGACACCTGGTTTCAAATGTGCGCCATCCCTGGCAGATGATAAAGCATCAGT
TGCAACTCCAGACGAGGAACCAATCGACGCAAGATGCCAAAGGCTAGAGAAGGACTGCAC
CGCCGATAGGCAGCAGCTGGAGGATTCAAAGGCGTGGCGCGCGGCGCTCGAGGAGGAGCG
CGACACGCTGAAGAGAGAAAACTCGTCCTTACTGGATGCGCTCGCCAAGGCGAGGCAGGA
CGCCGACCATCTCGTCGCCGACAGGCTGGAGGCGCTCAGGGAGCTGGACATGGAGAAGAG
CAGGATGGATGAGCTCAAGCAGGAGATCAAGCTCTTCAGCCAGGCCTTCTCGCTGAGGCA
GGGGCAGCTCACCTCCCTGTACACCAAGTCCAAGGCCATTGTGGAGAACTGCAAGACGTC
CCAGTTGGCCTTGCCCTGATGTTTCTTCCTCTTCTTCTTCAGCAGCAACTGCAGAGAAGC
GTGTTACGCATTCGATCCATCTGCAACCAATTCTTAAATTGCAGATTGTGTAGTGTATTT
GTTTGCTGTACGTGTGTGCTGGATTAGATTGCGTGGTATTACGAGCCGTGTGCAAAGCTC
CTGTGAAGTAGTAGTGTATACCGAAAAAAAAAACATTGCTATTGTTTGTGATTTGGGGGG
ACAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case