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Oryza sativa
cluster # 3193 cluster # 3193       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3193#0 length = 768 sequences # 2  

consensusID : consensus_3193#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 768
fasta sequence
                              [CAGC-GGAGAATCTCGTCTGATTCCAGC-GTGTGGGACCTCCGGGCGATGGCCGCCGCTGGCGGCGGCGGCGACGCCAAGTACAACTCGTACAAGGCGGCGGGGCTACGCGGCGCCATACTGGAGGCGGCGCACGTGTCGTGCCTCGAGGATCGCTACGCGCTGGGGCCCCAGCTCGGGTGGGGCCAGTTCGGCGTGATCCGGTCGTGCTCCGACATGGTCACCGGCGAGGCGCTCGCCTGCAAGTCCATCGCCAAGGACCGCCTCGTGTCCCCCGACGACGTGAGGGGGGTCAAGCTCGAGATCGAGGTCATGGCGCGCCTCTCGGGCCACCCCAACGTCGTTGACCTCAAGGCCGTGTACGAGGACGAGGCGTCCGTGCACCTGGTCATGGAGCTCTGCGCCGGCGGGGAGCTCTTCCACCGCCTCGAGGAGCGCGGCTGCTTCTCCGAGCACGAGGCCGCCGCGCTCTTCCGCTACCTCATGGAGGTCGTGGCGCATTGCCATAGCAAGGGGATCGTGCACCGGGACCTCAAGCCCGAGAACATCCTCCTTGTCAGCAAATCGCCTTCTTCGCCGATCAAGCTCGCCGATTTCGGCCTCGCAACCTACATCCAGCCTGGTCGGAGCTTGAGTGGCATGGTGGGTAGTCCATTTTACATTGCGCCCGAGGTGCTCGCCGGTGGGTACAATGAGGCTGCCGATGTATGGAGCGCGGGTGTGATACTTTACATCCTCCTGAGTGGCATCCCCCCATTGTGGGGGAAAACC]

[+] EMBL CB657643             [CAGC GGAGAATCTCGTCTGATTCCAGC GTGTGGGACCTCCGGGCGATGGCCGCCGCTGGCGGCGGCGGCGACGCCAAGTACAACTCGTACAAGGCGGCGGGGCTACGCGGCGCCATACTGGAGGCGGCGCACGTGTCGTGCCTCGAGGATCGCTACGCGCTGGGGCCCCAGCTCGGGTGGGGCCAGTTCGGCGTGATCCGGTCGTGCTCCGACATGGTCACCGGCGAGGCGCTCGCCTGCAAGTCCATCGCCAAGGACCGCCTCGTGTCCCCCGACGACGTGAGGGGGGTCAAGCTCGAGATCGAGGTCATGGCGCGCCTCTCGGGCCACCCCAACGTCGTTGACCTCAAGGCCGTGTACGAGGACGAGGCGTCCGTGCACCTGGTCATGGAGCTCTGCGCCGGCGGGGAGCTCTTCCACCGCCTCGAGGAGCGCGGCTGCTTCTCCGAGCACGAGGCCGCCGCGCTCTTCCGCTACCTCATGGAGGTCGTGGCGCATTGCCATAGCAAGGGGATCGTGCACCGGGACCTCAAGCCCGAGAACATCCTCCTTGTCAGCAAATCGCCTTCTTCGCCGATCAAGCTCGCCGATTTCGGCCTCGCAACCTACATCCAGCCTGGTCGGAGCTTGAGTGGCATGGTGGGTAGTCCATTTTACATTGCGCCCGAGGTGCTCGCCGGTGGGTACAATGAGGCTGCCGATGTATGGAGCGCGGGTGTGATACTTTACATCCTCCTGAGTGGCATCCCCCCATTGTGGGGGAAAACC]
[+] EMBL AU166309             [ AGCAGGAGAATCTCGTCTGATTCCAGCAGTGTGGGACCTCCGGGCGATGGCCGCCGCTGGCGGCGGCGGCGACGCCAAGTACAACTCGTACAAGGCGGCGGGGCTACGCGGCGCCATACTGGAGGCGGCGCACGTGTCGTGCCTCGAGGATCGCTACGCGCTGGGGCCCCAGCTCGGGTGGGGCCAGTTCGGCGTGATCCGGTCGTGCTCCGACATGGTCACCGGCGAGGCGCTCGCCTGCAAGTCCATCGCCAAGGACCGCCTCGTGTCCCCCGACGACGTGAGGGGGGTCAAGCTCGAGATCGAGGTCATGGCGCGCCTCTCGGGCCACCCCAACGTCGTTGACCTCAAGGCCGTGTACGAGGACGAGGCGTCCGTGCACCTGGTCATGGAGCTCTGCGCCGGCGGGGAGCTCTTCCACCGCCTCGAG                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_3193#0 CAGCGGAGAATCTCGTCTGATTCCAGCGTGTGGGACCTCCGGGCGATGGCCGCCGCTGGC GGCGGCGGCGACGCCAAGTACAACTCGTACAAGGCGGCGGGGCTACGCGGCGCCATACTG GAGGCGGCGCACGTGTCGTGCCTCGAGGATCGCTACGCGCTGGGGCCCCAGCTCGGGTGG GGCCAGTTCGGCGTGATCCGGTCGTGCTCCGACATGGTCACCGGCGAGGCGCTCGCCTGC AAGTCCATCGCCAAGGACCGCCTCGTGTCCCCCGACGACGTGAGGGGGGTCAAGCTCGAG ATCGAGGTCATGGCGCGCCTCTCGGGCCACCCCAACGTCGTTGACCTCAAGGCCGTGTAC GAGGACGAGGCGTCCGTGCACCTGGTCATGGAGCTCTGCGCCGGCGGGGAGCTCTTCCAC CGCCTCGAGGAGCGCGGCTGCTTCTCCGAGCACGAGGCCGCCGCGCTCTTCCGCTACCTC ATGGAGGTCGTGGCGCATTGCCATAGCAAGGGGATCGTGCACCGGGACCTCAAGCCCGAG AACATCCTCCTTGTCAGCAAATCGCCTTCTTCGCCGATCAAGCTCGCCGATTTCGGCCTC GCAACCTACATCCAGCCTGGTCGGAGCTTGAGTGGCATGGTGGGTAGTCCATTTTACATT GCGCCCGAGGTGCTCGCCGGTGGGTACAATGAGGCTGCCGATGTATGGAGCGCGGGTGTG ATACTTTACATCCTCCTGAGTGGCATCCCCCCATTGTGGGGGAAAACC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)