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Oryza sativa
cluster # 326 cluster # 326       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_326#0 length = 1454 sequences # 2  

consensusID : consensus_326#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1454
fasta sequence
                              [ACTTCAAGCCATCTCCTCTTCATTCTCTCCTAGCTTTCTCCCAACTTCCAGCCATTGCTCTCATAGCTGATCCACCAAGGAGCTAGAAGTAATTCCAGGGTTCTTAATTGCGGCAATGGCGATCCCGGTCATCGACTTCTCCAAGCTCGACGGCGATGAGAGCGAGGCCACCCTGGCGGAGCTCGCTGCGGGGTTTGAGGAGTGGGGGTTCTTCCAGCTGGTGAACACTGGCATCCCTGATGATCTGCTGGAAAGGGTGAAGAAGGTGTGCAGTGACATCTACAAGCTGCGCGAGGATGGGTTCAAAGAATCCAACCCCGCAGTGAAGGCTCTCGCCCGCCTGGTAGACCAGGAAGGCGAGGGCCTCGCAATGAAGAAAATCGAGGACATGGACTGGGAGGACGTCTTCACCCTCCAGGACGACCTGCCCTGGCCCTCCAACCCTCCATCCTTCAAGGAGACGATGATGGAGTACAGGAGGGAGCTGAAGAAGCTGGCAGAGAAGCTGCTGGGAGTGATGGAGGAGCTTCTTGGTCTGGAGGAAGGGCACATCAGGAAGGCCTTCACCAACGACGGCGACTTCGAGCCCTTCTACGGCACCAAGGTGAGCCACTACCCGCCGTGCCCGCGGCCGGAGCTCGTCGACGGCCTCCGCGCCCACACCGACGCCGGCGGCCTCATCCTCCTCTTCCAGGACGACCGCTTCGGCGGCCTCCAGATGATCCCCAACCGCGGCGGCGACGGCCGGTGGATCGACGTCCAGCCCGTCGAGAACGCCATCGTCGTCAACACCGGGGACCAGATCGAGGTGCTTAGCAATGGCCGCTTCAAGAGCGCATGGCACAGAATCCTGGCCACCCGGGACGGCAATCGCCGGAGCATCGCCTCCTTCTACAACCCGGCGCGCATGGCCAACATTGCTCCGGCGATCCCCGCCGCCGCCGCCGACTACCCGAGCTTCAAGTTCGGCGACTACATGGAGGTGTACGTGAAGCAGAAGTTCCAGGCCAAGGAGCCCAGGTTCGCAGCCCTGGCGAACAAGTGATTCAAATTGATGGGATGAAATTGAGCTTTGCAGCAATCTGAAGTCTGAACCTGCTGCAAAGCTCTCTCAGCCTTAAGCTACATATACAGTTCGAATAAGCGTGTGATTACAATACGGATTTGTAAGATGGATAGGTTGTCTAAGTATGTGCTTTGCAATACATATGTGTTAATTACTAGTGTCTTTGCAGCTATCACAACCATGTAATCATTCCAATTTGTATGGTGGCATGTAAGGTTGTCTTGTGCTGTGGTCAACAGATGCCAGAGTAGTTTGTAGCTAGAATTAATGGCATCCGTGGGGTTTTTTAAATTTTATTCGTTTCTGTTTGAATGTCAGTGTGTTTGCTCAGGTGGTGTGTACTTGTAAATTATTGAGATATTTGAGGAGGTCCTGTGTATGAAATATA]

[+] EMBL AK105491             [ACTTCAAGCCATCTCCTCTTCATTCTCTCCTAGCTTTCTCCCAACTTCCAGCCATTGCTCTCATAGCTGATCCACCAAGGAGCTAGAAGTAATTCCAGGGTTCTTAATTGCGGCAATGGCGATCCCGGTCATCGACTTCTCCAAGCTCGACGGCGATGAGAGCGAGGCCACCCTGGCGGAGCTCGCTGCGGGGTTTGAGGAGTGGGGGTTCTTCCAGCTGGTGAACACTGGCATCCCTGATGATCTGCTGGAAAGGGTGAAGAAGGTGTGCAGTGACATCTACAAGCTGCGCGAGGATGGGTTCAAAGAATCCAACCCCGCAGTGAAGGCTCTCGCCCGCCTGGTAGACCAGGAAGGCGAGGGCCTCGCAATGAAGAAAATCGAGGACATGGACTGGGAGGACGTCTTCACCCTCCAGGACGACCTGCCCTGGCCCTCCAACCCTCCATCCTTCAAGGAGACGATGATGGAGTACAGGAGGGAGCTGAAGAAGCTGGCAGAGAAGCTGCTGGGAGTGATGGAGGAGCTTCTTGGTCTGGAGGAAGGGCACATCAGGAAGGCCTTCACCAACGACGGCGACTTCGAGCCCTTCTACGGCACCAAGGTGAGCCACTACCCGCCGTGCCCGCGGCCGGAGCTCGTCGACGGCCTCCGCGCCCACACCGACGCCGGCGGCCTCATCCTCCTCTTCCAGGACGACCGCTTCGGCGGCCTCCAGATGATCCCCAACCGCGGCGGCGACGGCCGGTGGATCGACGTCCAGCCCGTCGAGAACGCCATCGTCGTCAACACCGGGGACCAGATCGAGGTGCTTAGCAATGGCCGCTTCAAGAGCGCATGGCACAGAATCCTGGCCACCCGGGACGGCAATCGCCGGAGCATCGCCTCCTTCTACAACCCGGCGCGCATGGCCAACATTGCTCCGGCGATCCCCGCCGCCGCCGCCGACTACCCGAGCTTCAAGTTCGGCGACTACATGGAGGTGTACGTGAAGCAGAAGTTCCAGGCCAAGGAGCCCAGGTTCGCAGCCCTGGCGAACAAGTGATTCAAATTGATGGGATGAAATTGAGCTTTGCAGCAATCTGAAGTCTGAACCTGCTGCAAAGCTCTCTCAGCCTTAAGCTACATATACAGTTCGAATAAGCGTGTGATTACAATACGGATTTGTAAGATGGATAGGTTGTCTAAGTATGTGCTTTGCAATACATATGTGTTAATTACTAGTGTCTTTGCAGCTATCACAACCATGTAATCATTCCAATTTGTATGGTGGCATGTAAGGTTGTCTTGTGCTGTGGTCAACAGATGCCAGAGTAGTTTGTAGCTAGAATTAATGGCATCCGTGGGGTTTTTTAAATTTTATTCGTTTCTGTTTGAATGTCAGTGTGTTTGCTCAGGTGGTGTGTACTTGTAAATTATTGAGATATTTGAGGAGGTCCTGTGTATGAAATATA]
[+] EMBL CA754584             [                TCTTCATTCTCTCCTAGCTTTCTCCCAACTTCCAGCCATTGCTCTCATAGCTGATCCACCAAGGAGCTAGAAGTAATTCCAGGGTTCTTAATTGCGGCAATGGCGATCCCGGTCATCGACTTCTCCAAGCTCGACGGCGATGAGAGCGAGGCCACCCTGGCGGAGCTCGCTGCGGGGTTTGAGGAGTGGGGGTTCTTCCAGCTGGTGAACACTGGCATCCCTGATGATCTGCTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_326#0 ACTTCAAGCCATCTCCTCTTCATTCTCTCCTAGCTTTCTCCCAACTTCCAGCCATTGCTC TCATAGCTGATCCACCAAGGAGCTAGAAGTAATTCCAGGGTTCTTAATTGCGGCAATGGC GATCCCGGTCATCGACTTCTCCAAGCTCGACGGCGATGAGAGCGAGGCCACCCTGGCGGA GCTCGCTGCGGGGTTTGAGGAGTGGGGGTTCTTCCAGCTGGTGAACACTGGCATCCCTGA TGATCTGCTGGAAAGGGTGAAGAAGGTGTGCAGTGACATCTACAAGCTGCGCGAGGATGG GTTCAAAGAATCCAACCCCGCAGTGAAGGCTCTCGCCCGCCTGGTAGACCAGGAAGGCGA GGGCCTCGCAATGAAGAAAATCGAGGACATGGACTGGGAGGACGTCTTCACCCTCCAGGA CGACCTGCCCTGGCCCTCCAACCCTCCATCCTTCAAGGAGACGATGATGGAGTACAGGAG GGAGCTGAAGAAGCTGGCAGAGAAGCTGCTGGGAGTGATGGAGGAGCTTCTTGGTCTGGA GGAAGGGCACATCAGGAAGGCCTTCACCAACGACGGCGACTTCGAGCCCTTCTACGGCAC CAAGGTGAGCCACTACCCGCCGTGCCCGCGGCCGGAGCTCGTCGACGGCCTCCGCGCCCA CACCGACGCCGGCGGCCTCATCCTCCTCTTCCAGGACGACCGCTTCGGCGGCCTCCAGAT GATCCCCAACCGCGGCGGCGACGGCCGGTGGATCGACGTCCAGCCCGTCGAGAACGCCAT CGTCGTCAACACCGGGGACCAGATCGAGGTGCTTAGCAATGGCCGCTTCAAGAGCGCATG GCACAGAATCCTGGCCACCCGGGACGGCAATCGCCGGAGCATCGCCTCCTTCTACAACCC GGCGCGCATGGCCAACATTGCTCCGGCGATCCCCGCCGCCGCCGCCGACTACCCGAGCTT CAAGTTCGGCGACTACATGGAGGTGTACGTGAAGCAGAAGTTCCAGGCCAAGGAGCCCAG GTTCGCAGCCCTGGCGAACAAGTGATTCAAATTGATGGGATGAAATTGAGCTTTGCAGCA ATCTGAAGTCTGAACCTGCTGCAAAGCTCTCTCAGCCTTAAGCTACATATACAGTTCGAA TAAGCGTGTGATTACAATACGGATTTGTAAGATGGATAGGTTGTCTAAGTATGTGCTTTG CAATACATATGTGTTAATTACTAGTGTCTTTGCAGCTATCACAACCATGTAATCATTCCA ATTTGTATGGTGGCATGTAAGGTTGTCTTGTGCTGTGGTCAACAGATGCCAGAGTAGTTT GTAGCTAGAATTAATGGCATCCGTGGGGTTTTTTAAATTTTATTCGTTTCTGTTTGAATG TCAGTGTGTTTGCTCAGGTGGTGTGTACTTGTAAATTATTGAGATATTTGAGGAGGTCCT GTGTATGAAATATA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)