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Oryza sativa
cluster # 3274 cluster # 3274       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3274#0 length = 1072 sequences # 2  

consensusID : consensus_3274#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1072
fasta sequence
                              [TGCGTGAGCTGAGCTGAGCTAGGCGTCGCGCGCGATGTCGTCGCTGTACCCGTCTCTCCTCTCGCTGAGCGAGAGCCCCGCCGAGTACCGGCAGGTCGGCGGTGGCCGCTACGCGGGGGAGGACGTCGTCGACGACGACGACGACATGGCTGCCGTCGCCGACGCTGTGTCCAGCTACCTCTCCTTCGACATGGACGACGTCGAGTATTACACGCCGGAGGTGGGCTTCCACTCAAAGCAGCACAACCCGCCGCCAGTTGCTGCGGCGCCACTGGAAGCCGGAGGAGGCAGGGAGCAAAGCCGGCGGGAAGCCGCCGTCAATCTTGGCAAGATGGACAGGGGACCGGCGCCGGTGAGCGGCGGCGCGGCGACTGGCGGCGTGCCGAGGAGCAAGAACGGCAGCAAGATCGCGTTCAAGACGAGGTCGGAGGTGGACGTGCTGGACGACGGCTACCGGTGGAGGAAGTACGGCAAGAAGATGGTCAAGAACAGCCCCAACCCAAGGAACTACTACCGGTGCTCGAGCGAGGGGTGCCGCGTGAAGAAGCGGGTGGAGCGCGCCCGGGACGACGCGCGCTTCGTCGTCACCACCTACGACGGCGTCCACAACCACCCGGCGCCGCTGCACCTCAGGCCGCAGCTGCCGCCGCCCGGCGGCTACTCGATCGCCGGGGCACCGGCCGTGGTGGCGCCGCACGGCCGCCTCGGGCTGGAGGAGGCCGAGGTGATCGCTCTCTTCAGGGGCACCACCGCCACCTCGCTGCTGCTTCCTTGACCGGCCAGTCCGACGCGGCGGCGCCGGCGGCGACAACTGACTAGCTAGTGTGAGTCCTGGGCCGTACAGGAATGGACAATTAGTTTGTCTCCGATCGAGGACCAAGGCGACCTGAATCAAAATTACGGCCCATCGATATATAGTAGGTCGTTTAATTCATCGAAATTAGACGAATTTCATGTACAATTATTGCATTACAGTATTATTTGAAACAGTATTGTATATATTTGCTATACAATTTGATGGATCGTATGTCTTTAGCAGTTGTAAGTATATTAATCTATAGATCTAGTAGTT]

[+] EMBL AK108522             [TGCGTGAGCTGAGCTGAGCTAGGCGTCGCGCGCGATGTCGTCGCTGTACCCGTCTCTCCTCTCGCTGAGCGAGAGCCCCGCCGAGTACCGGCAGGTCGGCGGTGGCCGCTACGCGGGGGAGGACGTCGTCGACGACGACGACGACATGGCTGCCGTCGCCGACGCTGTGTCCAGCTACCTCTCCTTCGACATGGACGACGTCGAGTATTACACGCCGGAGGTGGGCTTCCACTCAAAGCAGCACAACCCGCCGCCAGTTGCTGCGGCGCCACTGGAAGCCGGAGGAGGCAGGGAGCAAAGCCGGCGGGAAGCCGCCGTCAATCTTGGCAAGATGGACAGGGGACCGGCGCCGGTGAGCGGCGGCGCGGCGACTGGCGGCGTGCCGAGGAGCAAGAACGGCAGCAAGATCGCGTTCAAGACGAGGTCGGAGGTGGACGTGCTGGACGACGGCTACCGGTGGAGGAAGTACGGCAAGAAGATGGTCAAGAACAGCCCCAACCCAAGGAACTACTACCGGTGCTCGAGCGAGGGGTGCCGCGTGAAGAAGCGGGTGGAGCGCGCCCGGGACGACGCGCGCTTCGTCGTCACCACCTACGACGGCGTCCACAACCACCCGGCGCCGCTGCACCTCAGGCCGCAGCTGCCGCCGCCCGGCGGCTACTCGATCGCCGGGGCACCGGCCGTGGTGGCGCCGCACGGCCGCCTCGGGCTGGAGGAGGCCGAGGTGATCGCTCTCTTCAGGGGCACCACCGCCACCTCGCTGCTGCTTCCTTGACCGGCCAGTCCGACGCGGCGGCGCCGGCGGCGACAACTGACTAGCTAGTGTGAGTCCTGGGCCGTACAGGAATGGACAATTAGTTTGTCTCCGATCGAGGACCAAGGCGACCTGAATCAAAATTACGGCCCATCGATATATAGTAGGTCGTTTAATTCATCGAAATTAGACGAATTTCATGTACAATTATTGCATTACAGTATTATTTGAAACAGTATTGTATATATTTGCTATACAATTTGATGGATCGTATGTCTTTAGCAGTTGTAAGTATATTAATCTATAGATCTAGTAGTT]
[+] EMBL AY341846             [    TGAGCTGAGCTGAGCTAGGCGTCGCGCGCGATGTCGTCGCTGTACCCGTCTCTCCTCTCGCTGAGCGAGAGCCCCGCCGAGTACCGGCAGGTCGGCGGTGGCCGCTACGCGGGGGAGGACGTCGTCGACGACGACGACGACATGGCTGCCGTCGCCGACGCTGTGTCCAGCTACCTCTCCTTCGACATGGACGACGTCGAGTATTACACGCCGGAGGTGGGCTTCCACTCAAAGCAGCACAACCCGCCGCCAGTTGCTGCGGCGCCACTGGAAGCCGGAGGAGGCAGGGAGCAAAGCCGGCGGGAAGCCGCCGTCAATCTTGGCAAGATGGACAGGGGACCGGCGCCGGTGAGCGGCGGCGCGGCGACTGGCGGCGTGCCGAGGAGCAAGAACGGCAGCAAGATCGCGTTCAAGACGAGGTCGGAGGTGGACGTGCTGGACGACGGCTACCGGTGGAGGAAGTACGGCAAGAAGATGGTCAAGAACAGCCCCAACCCAAGGAACTACTACCGGTGCTCGAGCGAGGGGTGCCGCGTGAAGAAGCGGGTGGAGCGCGCCCGGGACGACGCGCGCTTCGTCGTCACCACCTACGACGGCGTCCACAACCACCCGGCGCCGCTGCACCTCAGGCCGCAGCTGCCGCCGCCCGGCGGCTACTCGATCGCCGGGGCACCGGCCGTGGTGGCGCCGCACGGCCGCCTCGGGCTGGAGGAGGCCGAGGTGATCGCTCTCTTCAGGGGCACCACCGCCACCTCGCTGCTGCTTCCTTGACCGGCCAGTCCGACGCGGCGGCGCCGGCGGCGACAACTGACTAGCTAGTGTGAGTCCTGGGCCGTACAGGAATGGACAATTAGTTTGTCTCCGATCGAGGACCAAGGCGACCTGAATCAAAATTACGGCCCATCGATATATAGTAGGTCGTTTAATTCATCGAAATTAGACGAATTTCATGTACAATTATTGC                                                                                                        ]


>consensus_3274#0 TGCGTGAGCTGAGCTGAGCTAGGCGTCGCGCGCGATGTCGTCGCTGTACCCGTCTCTCCT CTCGCTGAGCGAGAGCCCCGCCGAGTACCGGCAGGTCGGCGGTGGCCGCTACGCGGGGGA GGACGTCGTCGACGACGACGACGACATGGCTGCCGTCGCCGACGCTGTGTCCAGCTACCT CTCCTTCGACATGGACGACGTCGAGTATTACACGCCGGAGGTGGGCTTCCACTCAAAGCA GCACAACCCGCCGCCAGTTGCTGCGGCGCCACTGGAAGCCGGAGGAGGCAGGGAGCAAAG CCGGCGGGAAGCCGCCGTCAATCTTGGCAAGATGGACAGGGGACCGGCGCCGGTGAGCGG CGGCGCGGCGACTGGCGGCGTGCCGAGGAGCAAGAACGGCAGCAAGATCGCGTTCAAGAC GAGGTCGGAGGTGGACGTGCTGGACGACGGCTACCGGTGGAGGAAGTACGGCAAGAAGAT GGTCAAGAACAGCCCCAACCCAAGGAACTACTACCGGTGCTCGAGCGAGGGGTGCCGCGT GAAGAAGCGGGTGGAGCGCGCCCGGGACGACGCGCGCTTCGTCGTCACCACCTACGACGG CGTCCACAACCACCCGGCGCCGCTGCACCTCAGGCCGCAGCTGCCGCCGCCCGGCGGCTA CTCGATCGCCGGGGCACCGGCCGTGGTGGCGCCGCACGGCCGCCTCGGGCTGGAGGAGGC CGAGGTGATCGCTCTCTTCAGGGGCACCACCGCCACCTCGCTGCTGCTTCCTTGACCGGC CAGTCCGACGCGGCGGCGCCGGCGGCGACAACTGACTAGCTAGTGTGAGTCCTGGGCCGT ACAGGAATGGACAATTAGTTTGTCTCCGATCGAGGACCAAGGCGACCTGAATCAAAATTA CGGCCCATCGATATATAGTAGGTCGTTTAATTCATCGAAATTAGACGAATTTCATGTACA ATTATTGCATTACAGTATTATTTGAAACAGTATTGTATATATTTGCTATACAATTTGATG GATCGTATGTCTTTAGCAGTTGTAAGTATATTAATCTATAGATCTAGTAGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)