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Oryza sativa
cluster # 3289 cluster # 3289       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3289#0 length = 1126 sequences # 2  

consensusID : consensus_3289#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1126
fasta sequence
                              [GACGCCAGCGGAACGGAATGTGGAGAGGTGGGTGGGGCCTCGTGGAGATTCCGGAGTTCGGGGGAATGGACGGTCTTGATTGACTAAGGACGGCCTCGAGATTCGTGCTCGCGGAACTTGCCGACGCGGCACGGCGACAGGTGGCCTCTCGCTCTCCGTCCGGACTCCCGGACTCTTCCTCCGCCGCCGCCGCCATGGCGATGGGCGCGGCGGTCCGGCGGATGCACGCCGCAGCGGCGGCGGCGGCGGCGGCGCAGCCCCCGCGCCTGACGAAGCTTGCGCTGCACCCGCCCAGATCGGTGAGTTCCTCCTCCTCCGCTCTCGGCGGCTAATTTCTTCCCGCTTAGATCCCGTGCGCTTTGCCTGTTCCTTGCTTCCTTCCTACTGTTGGTTGGTGGTACTTCGTTTGGTGTCGCGAAGCCAAGTGCACTTTCGGTTCCAAACTCGCTACATCGCCGCATTGGACCACCTGCTGTATTGCTGCTGTGCCGTCGACTTCACTTCATCCATTCATTTACTGTTGTAACTTACCTTGATCCTTCTGTTTGAGTAATGGGATTGCGAAGTGACTAGCTGGAACTCGAATTGGTTCTGAGAGTATTGCTCTTTTCGGCAACGGGGAATGTAGCGAATTCATCATACATTCATACTGTTCATCCGTGGGTGACCAGACAGCGAAGTATGAAAAGAATCGCTAGTGAGCACTACAATTGGTCCCCGCTCTTCATTTTTCCAATTGGGTGCTGGAAATCTTGTGAAATCTTGCGTGCGATCCAGGTGGAGCTCCAAATCAGTGGCAGCGAATAGTCAGTCATCTTTATCCCAAATATCTCGGATCATGTCCTTGTCAAAGTTCCTGCCATGGACATAATTTGAAGATATTTGTTGGTGATTGTTTGGTCGTGTACACATAATGGCATCAGTCACAATTGGATTGAGCTTACAAGCCACAATTAATAATGAAAATCTCACATTGACTGAAGTGCTATAGCCATCCCATGATAAGTGCTCTAGTTTATGTGCAATTTTATTGTAGAAATTACTGACATAATTTTCTTTTCATTTTTTCTCATTAATATGATCTTGCTGAACAGGTGTTCCTCCATATTGCTGCATGATGCCTCAT]

[+] EMBL AK065762             [GACGCCAGCGGAACGGAATGTGGAGAGGTGGGTGGGGCCTCGTGGAGATTCCGGAGTTCGGGGGAATGGACGGTCTTGATTGACTAAGGACGGCCTCGAGATTCGTGCTCGCGGAACTTGCCGACGCGGCACGGCGACAGGTGGCCTCTCGCTCTCCGTCCGGACTCCCGGACTCTTCCTCCGCCGCCGCCGCCATGGCGATGGGCGCGGCGGTCCGGCGGATGCACGCCGCAGCGGCGGCGGCGGCGGCGGCGCAGCCCCCGCGCCTGACGAAGCTTGCGCTGCACCCGCCCAGATCGGTGAGTTCCTCCTCCTCCGCTCTCGGCGGCTAATTTCTTCCCGCTTAGATCCCGTGCGCTTTGCCTGTTCCTTGCTTCCTTCCTACTGTTGGTTGGTGGTACTTCGTTTGGTGTCGCGAAGCCAAGTGCACTTTCGGTTCCAAACTCGCTACATCGCCGCATTGGACCACCTGCTGTATTGCTGCTGTGCCGTCGACTTCACTTCATCCATTCATTTACTGTTGTAACTTACCTTGATCCTTCTGTTTGAGTAATGGGATTGCGAAGTGACTAGCTGGAACTCGAATTGGTTCTGAGAGTATTGCTCTTTTCGGCAACGGGGAATGTAGCGAATTCATCATACATTCATACTGTTCATCCGTGGGTGACCAGACAGCGAAGTATGAAAAGAATCGCTAGTGAGCACTACAATTGGTCCCCGCTCTTCATTTTTCCAATTGGGTGCTGGAAATCTTGTGAAATCTTGCGTGCGATCCAGGTGGAGCTCCAAATCAGTGGCAGCGAATAGTCAGTCATCTTTATCCCAAATATCTCGGATCATGTCCTTGTCAAAGTTCCTGCCATGGACATAATTTGAAGATATTTGTTGGTGATTGTTTGGTCGTGTACACATAATGGCATCAGTCACAATTGGATTGAGCTTACAAGCCACAATTAATAATGAAAATCTCACATTGACTGAAGTGCTATAGCCATCCCATGATAAGTGCTCTAGTTTATGTGCAATTTTATTGTAGAAATTACTGACATAATTTTCTTTTCATTTTTTCTCATTAATATGATCTTGCTGAACAGGTGTTCCTCCATATTGCTGCATGATGCCTCAT]
[+] EMBL CF292874             [                                                                                                                                                                                                                                                                                                                                    GCGGCTATTTTCTTCCCGCGTAGATCCCGTGCGCTTTGCCTGTTCCTTGCTTCCTT CTACTGTTGGTTGGTGGTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_3289#0 GACGCCAGCGGAACGGAATGTGGAGAGGTGGGTGGGGCCTCGTGGAGATTCCGGAGTTCG GGGGAATGGACGGTCTTGATTGACTAAGGACGGCCTCGAGATTCGTGCTCGCGGAACTTG CCGACGCGGCACGGCGACAGGTGGCCTCTCGCTCTCCGTCCGGACTCCCGGACTCTTCCT CCGCCGCCGCCGCCATGGCGATGGGCGCGGCGGTCCGGCGGATGCACGCCGCAGCGGCGG CGGCGGCGGCGGCGCAGCCCCCGCGCCTGACGAAGCTTGCGCTGCACCCGCCCAGATCGG TGAGTTCCTCCTCCTCCGCTCTCGGCGGCTAATTTCTTCCCGCTTAGATCCCGTGCGCTT TGCCTGTTCCTTGCTTCCTTCCTACTGTTGGTTGGTGGTACTTCGTTTGGTGTCGCGAAG CCAAGTGCACTTTCGGTTCCAAACTCGCTACATCGCCGCATTGGACCACCTGCTGTATTG CTGCTGTGCCGTCGACTTCACTTCATCCATTCATTTACTGTTGTAACTTACCTTGATCCT TCTGTTTGAGTAATGGGATTGCGAAGTGACTAGCTGGAACTCGAATTGGTTCTGAGAGTA TTGCTCTTTTCGGCAACGGGGAATGTAGCGAATTCATCATACATTCATACTGTTCATCCG TGGGTGACCAGACAGCGAAGTATGAAAAGAATCGCTAGTGAGCACTACAATTGGTCCCCG CTCTTCATTTTTCCAATTGGGTGCTGGAAATCTTGTGAAATCTTGCGTGCGATCCAGGTG GAGCTCCAAATCAGTGGCAGCGAATAGTCAGTCATCTTTATCCCAAATATCTCGGATCAT GTCCTTGTCAAAGTTCCTGCCATGGACATAATTTGAAGATATTTGTTGGTGATTGTTTGG TCGTGTACACATAATGGCATCAGTCACAATTGGATTGAGCTTACAAGCCACAATTAATAA TGAAAATCTCACATTGACTGAAGTGCTATAGCCATCCCATGATAAGTGCTCTAGTTTATG TGCAATTTTATTGTAGAAATTACTGACATAATTTTCTTTTCATTTTTTCTCATTAATATG ATCTTGCTGAACAGGTGTTCCTCCATATTGCTGCATGATGCCTCAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)