cluster # 3337

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Oryza sativa
cluster # 3337 cluster # 3337 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3337#0 length = 978 sequences # 2

consensusID : consensus_3337#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 978
fasta sequence

                              [TACATTGATGATCGAAATTTATCTGTAACGACCGTCAATACTCATGCACATAGCACTACACACCCCTCCCTCCGACTCGAGTTCTATGCTCTTCGTTAATCTCCTCCTCCCTATTTTTTAGCCGTGAAACTTAAATACAAAAAATCAATAATTATAAACAGTACGTCTGATTTCTTATCTACCTATTGCTCAAATTACAATCAAATCAACAATGCAAGATTCATATGTTTATATTTTGCTATATAAGAAATATGACATTTTGGCACAGTCAACCTATCACTTATATAAGTATCTCAAACACAACCTACGATGCACACACGCGTGAATGCGAGGGTTACCTTCTTAGTAAAATAATAATAACACTGGCCTTTTGCACATTTCAAATTTCTAGTCACAAATATTGTNTTTGTGTTGCGTATTAACACAAATGTGTAGAACTATATCTTTTTTCTCATGTTCAATTGCTAGTTATAAAANTATCATTTTTGTGCTATGAACTGAATTCTCTCAAGAAAAATCTAGGTTGAATGCACGACGTTTCTCACACATCCATCGACGTCACATGTACCATCTAACCCTATTAATTCTACAAAACGCTACTCCCAAACCATCGCCACCATCGTCTCCTTTTGCTCAGGCCATCATAGATGGTCCTCATGTCCCCATCTTGGATCATAACTTGTTTCATGCCATAGCCTTTTTTTCCCTTGTTCCATAACTCCTAGGCACCCTCCCAATCCAATTATGGTGTCAAAGGTTTGTCCGTGTCTTTGCCCGTCCTGTCTTTCTAACCTTCAGGACATCAAAAATCCTAAGCCGTCACAGTCCTACGTAAATTCCTAAACTTATAGGGGTACATCTGAAAAAGGTAACAAACTAAAAATCACAGGGGTATCCGCGTAAAAGTTGCACAGTTCGACTTCGATCTCACATTCTCACCCACCTGTGACCTGACGCAGGTGCGAACTCGAAAAAAAA]

[+] EMBL CF297598             [TACATTGATGATCGAAATTTATCTGTAACGACCGTCAATACTCATGCACATAGCACTACACACCCCTCCCTCCGACTCGAGTTCTATGCTCTTCGTTAATCTCCTCCTCCCTATTTTTTAGCCGTGAAACTTAAATACAAAAAATCAATAATTATAAACAGTACGTCTGATTTCTTATCTACCTATTGCTCAAATTACAATCAAATCAACAATGCAAGATTCATATGTTTATATTTTGCTATATAAGAAATATGACATTTTGGCACAGTCAACCTATCACTTATATAAGTATCTCAAACACAACCTACGATGCACACACGCGTGAATGCGAGGGTTACCTTCTTAGTAAAATAATAATAACACTGGCCTTTTGCACATTTCAAATTTCTAGTCACAAATATTGTNTTTGTGTTGCGTATTAACACAAATGTGTAGAACTATATCTTTTTTCTCATGTTCAATTGCTAGTTATAAAANTATCATTTTTGTGCTATGAACTGAATTCTCTCAAGAAAAATCTAGGTTGAATGCACGACGTTTCTCACACATCCATCGACGTCACATGTACCATCTAACCCTATTAATTCTACAAAACGCTACTCCCAAACCATCGCCACCATCGTCTCCTTTTGCTCAGGCCATCATAGATGGTCCTCATGTCCCCATCTTG                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF297599             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        TATCTTTTTTCTCATGTTCAATTGCTAGTTATAAAA TATCATTTTTGTGCTATGAACTGAATTCTCTCAAGAAAAATCTAGGTTGAATGCACGACGTTTCTCACACATCCATCGACGTCACATGTACCATCTAACCCTATTAATTCTACAAAACGCTACTCCCAAACCATCGCCACCATCGTCTCCTTTTGCTCAGGCCATCATAGATGGTCCTCATGTCCCCATCTTGGATCATAACTTGTTTCATGCCATAGCCTTTTTTTCCCTTGTTCCATAACTCCTAGGCACCCTCCCAATCCAATTATGGTGTCAAAGGTTTGTCCGTGTCTTTGCCCGTCCTGTCTTTCTAACCTTCAGGACATCAAAAATCCTAAGCCGTCACAGTCCTACGTAAATTCCTAAACTTATAGGGGTACATCTGAAAAAGGTAACAAACTAAAAATCACAGGGGTATCCGCGTAAAAGTTGCACAGTTCGACTTCGATCTCACATTCTCACCCACCTGTGACCTGACGCAGGTGCGAACTCGAAAAAAAA]




>consensus_3337#0
TACATTGATGATCGAAATTTATCTGTAACGACCGTCAATACTCATGCACATAGCACTACA
CACCCCTCCCTCCGACTCGAGTTCTATGCTCTTCGTTAATCTCCTCCTCCCTATTTTTTA
GCCGTGAAACTTAAATACAAAAAATCAATAATTATAAACAGTACGTCTGATTTCTTATCT
ACCTATTGCTCAAATTACAATCAAATCAACAATGCAAGATTCATATGTTTATATTTTGCT
ATATAAGAAATATGACATTTTGGCACAGTCAACCTATCACTTATATAAGTATCTCAAACA
CAACCTACGATGCACACACGCGTGAATGCGAGGGTTACCTTCTTAGTAAAATAATAATAA
CACTGGCCTTTTGCACATTTCAAATTTCTAGTCACAAATATTGTNTTTGTGTTGCGTATT
AACACAAATGTGTAGAACTATATCTTTTTTCTCATGTTCAATTGCTAGTTATAAAANTAT
CATTTTTGTGCTATGAACTGAATTCTCTCAAGAAAAATCTAGGTTGAATGCACGACGTTT
CTCACACATCCATCGACGTCACATGTACCATCTAACCCTATTAATTCTACAAAACGCTAC
TCCCAAACCATCGCCACCATCGTCTCCTTTTGCTCAGGCCATCATAGATGGTCCTCATGT
CCCCATCTTGGATCATAACTTGTTTCATGCCATAGCCTTTTTTTCCCTTGTTCCATAACT
CCTAGGCACCCTCCCAATCCAATTATGGTGTCAAAGGTTTGTCCGTGTCTTTGCCCGTCC
TGTCTTTCTAACCTTCAGGACATCAAAAATCCTAAGCCGTCACAGTCCTACGTAAATTCC
TAAACTTATAGGGGTACATCTGAAAAAGGTAACAAACTAAAAATCACAGGGGTATCCGCG
TAAAAGTTGCACAGTTCGACTTCGATCTCACATTCTCACCCACCTGTGACCTGACGCAGG
TGCGAACTCGAAAAAAAA

clustalw multiple alignements is not computed in this case