cluster # 3338

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Oryza sativa
cluster # 3338 cluster # 3338 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3338#0 length = 2187 sequences # 1

consensus_3338#1 length = 2187 sequences # 1

consensusID : consensus_3338#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2187
fasta sequence

                              [TGATTCTCGGACTTCTGAGGTAGCAATTGTACACAGCAGTCTTAACCAATTGGTAGTGAATTGAAGTTATAGAATATCAAGATGACGATTCCTGACGAGGTTGACATCATCGTGTGCGGTGGCGGATCATGCGGTTGCGTCGTGGCCGGCCGCTTGGCCAACCTAGACCACAACCTCCAAGTCCTCTTGATTGAGGGCGGAGAGAACAACTTGAACAACCCATGGGTATTCCGTCCGGGTATCTACCCCAGGAATATGAAGCTGGACAGCAAGACTGCCTCCTTCTACTACTCCCGGCCATCAGAGTGGCTTGACGGACGACGAGCTGTCGTGCCATGTGCTCATATTCTTGGAGGTGGATCTTCCATCAACTTCATGATGTACACCCGCGCCTCGGCCTCGGACTACGATGACTTCCAGGCCAAGGGCTGGACTACCAAGGAACTCCTCCCTCTTATGAAGAAGCACGAGACATACCAGCGAGCTTGCAACAACCGCGACATCCACGGCTTCGAGGGCCCCATCAAAGTGTCATTTGGCAACTACACATACCCGATCAAGGAGGACTTCCTGCGTGCTACCGAGACTCAAGGCATCCCCACTACTGATGATCTCCAGGACCTTGTGACTGGCCACGGTGCTGAGCATTGGCTCAAGTGGATCAACAGGGACACGGGTCGACGATCTGACCCTGCGCATGGGTACATTCATAGCACGAGGGCTGTGCACCAGAACTTGCACTTGCTTACCAGCAACAAGGTTGAGAAGGTCATTCTTGAAGGCGACCGTGCTGTTGGCGTCAAGGTCGTTCCCACCAAGCACCTGTCCAACGCTCAGGTCCCGTCTCGCATCATCAGAGCTCGCAAGCAAATCATCGTGTCTGGCGGCACTCTGAGCTCACCCCTCATTCTCCAACGCTCTGGTATCGGTGACCCAGAGAAGCTTCGCAAGGCTGGCATCAAGCCTCTTGTCGACTTGCCTGGTGTGGGATTGAACTTCCAAGATCACTATCTTACCTTCGCCACCTACCGCGCAAAGCCACATGTCGAGTCTTTCGACGACTTTGCGCGCGGCGATCCCGCAACGCAAGAACGCGTCTTCCAGCAATGGAATATTAACGGCACTGGCCCGCTCGCCACCAACGGCATTGAAGCTGGCGTCAAGATCCGCCCCACCGAAGACGAGCTCAAGATGATGGACAGCTGGCCATGTCCCGAGTTCCGCTCCGGCTGGGACAGCTACTTCAAAGACAAGCCCGACAAGCCCGTGATGCACTACTCGGTCATCGCAGGCTGGTTCGGCGACCACATGGTCATGCCGCCGGGCAAGTTCTTCACCATGTTCCACTTCCTGGAGTATCCGTTCTCCCGCGGATCGACGCACATTGTGTCGCCGAACCCGTACGAGGCCCCGGACTTTGATGCGGGCTTCATGAACGATAAGAGGGATATGGCGCCGATGGTGTGGGGATATGTCAAGTCGCGTGAGACGGCGAGACGCATGGATGCGTATGCGGGTGAGGTGCAAGCTATGCATCCTTTCTATGCGTATGATAGTCCTGCGCGCGCGAAAGACCTGGATCTCGCGACTACGAATGCGTATGCGCTACCAGGAAACATCACGGCGGGTATCCAGCATGGAAGCTGGACGATGCCTATGGAGAAGGGACGCGCGCCCGAGCCGAACTTTTTGAACTCGAATTGTCAGGAGGTGCTTCCTGATCTTGAGTACTCGAAGGAGGATATCGAGCATGTGATTAACTGGACCAAGCGCCACGTCGAAACGACCTGGCACTCCCTCGGCACGTGTTCCATGGCCCCACGCGAAGGCAACTCCATCGTCAAGCACGGCGTGCTCGACGAGCGCCTCAACGTACACGGTGTCAAGGGCCTCAAGGTCGCTGACCTGTCCATCTGCCCCGACAACGTGGGCTGCAACACGTACAGCACTGCGCTGTTGATTGGCGAGAAGTGCGCTGTGTTGGTGGGTGAGGACCTTGGATATTCTGGATCGGCGCTGGATATGAAGGTTCCGACGTATCATGCGCCGAGAGAGGTTGTTGGGTTGTCGAGGTTGTAAGGACGATGGCTTGTGGGATGTAGCTAGTCTATCTCTGCTTGCTGCTTTGTTGTGCTGGAATGGGGCGCATGGATGTGAAGTATGTAAATGACAGAATGAATCACGACG]

[+] EMBL AK108899             [TGATTCTCGGACTTCTGAGGTAGCAATTGTACACAGCAGTCTTAACCAATTGGTAGTGAATTGAAGTTATAGAATATCAAGATGACGATTCCTGACGAGGTTGACATCATCGTGTGCGGTGGCGGATCATGCGGTTGCGTCGTGGCCGGCCGCTTGGCCAACCTAGACCACAACCTCCAAGTCCTCTTGATTGAGGGCGGAGAGAACAACTTGAACAACCCATGGGTATTCCGTCCGGGTATCTACCCCAGGAATATGAAGCTGGACAGCAAGACTGCCTCCTTCTACTACTCCCGGCCATCAGAGTGGCTTGACGGACGACGAGCTGTCGTGCCATGTGCTCATATTCTTGGAGGTGGATCTTCCATCAACTTCATGATGTACACCCGCGCCTCGGCCTCGGACTACGATGACTTCCAGGCCAAGGGCTGGACTACCAAGGAACTCCTCCCTCTTATGAAGAAGCACGAGACATACCAGCGAGCTTGCAACAACCGCGACATCCACGGCTTCGAGGGCCCCATCAAAGTGTCATTTGGCAACTACACATACCCGATCAAGGAGGACTTCCTGCGTGCTACCGAGACTCAAGGCATCCCCACTACTGATGATCTCCAGGACCTTGTGACTGGCCACGGTGCTGAGCATTGGCTCAAGTGGATCAACAGGGACACGGGTCGACGATCTGACCCTGCGCATGGGTACATTCATAGCACGAGGGCTGTGCACCAGAACTTGCACTTGCTTACCAGCAACAAGGTTGAGAAGGTCATTCTTGAAGGCGACCGTGCTGTTGGCGTCAAGGTCGTTCCCACCAAGCACCTGTCCAACGCTCAGGTCCCGTCTCGCATCATCAGAGCTCGCAAGCAAATCATCGTGTCTGGCGGCACTCTGAGCTCACCCCTCATTCTCCAACGCTCTGGTATCGGTGACCCAGAGAAGCTTCGCAAGGCTGGCATCAAGCCTCTTGTCGACTTGCCTGGTGTGGGATTGAACTTCCAAGATCACTATCTTACCTTCGCCACCTACCGCGCAAAGCCACATGTCGAGTCTTTCGACGACTTTGCGCGCGGCGATCCCGCAACGCAAGAACGCGTCTTCCAGCAATGGAATATTAACGGCACTGGCCCGCTCGCCACCAACGGCATTGAAGCTGGCGTCAAGATCCGCCCCACCGAAGACGAGCTCAAGATGATGGACAGCTGGCCATGTCCCGAGTTCCGCTCCGGCTGGGACAGCTACTTCAAAGACAAGCCCGACAAGCCCGTGATGCACTACTCGGTCATCGCAGGCTGGTTCGGCGACCACATGGTCATGCCGCCGGGCAAGTTCTTCACCATGTTCCACTTCCTGGAGTATCCGTTCTCCCGCGGATCGACGCACATTGTGTCGCCGAACCCGTACGAGGCCCCGGACTTTGATGCGGGCTTCATGAACGATAAGAGGGATATGGCGCCGATGGTGTGGGGATATGTCAAGTCGCGTGAGACGGCGAGACGCATGGATGCGTATGCGGGTGAGGTGCAAGCTATGCATCCTTTCTATGCGTATGATAGTCCTGCGCGCGCGAAAGACCTGGATCTCGCGACTACGAATGCGTATGCGCTACCAGGAAACATCACGGCGGGTATCCAGCATGGAAGCTGGACGATGCCTATGGAGAAGGGACGCGCGCCCGAGCCGAACTTTTTGAACTCGAATTGTCAGGAGGTGCTTCCTGATCTTGAGTACTCGAAGGAGGATATCGAGCATGTGATTAACTGGACCAAGCGCCACGTCGAAACGACCTGGCACTCCCTCGGCACGTGTTCCATGGCCCCACGCGAAGGCAACTCCATCGTCAAGCACGGCGTGCTCGACGAGCGCCTCAACGTACACGGTGTCAAGGGCCTCAAGGTCGCTGACCTGTCCATCTGCCCCGACAACGTGGGCTGCAACACGTACAGCACTGCGCTGTTGATTGGCGAGAAGTGCGCTGTGTTGGTGGGTGAGGACCTTGGATATTCTGGATCGGCGCTGGATATGAAGGTTCCGACGTATCATGCGCCGAGAGAGGTTGTTGGGTTGTCGAGGTTGTAAGGACGATGGCTTGTGGGATGTAGCTAGTCTATCTCTGCTTGCTGCTTTGTTGTGCTGGAATGGGGCGCATGGATGTGAAGTATGTAAATGACAGAATGAATCACGACG]




>consensus_3338#0
TGATTCTCGGACTTCTGAGGTAGCAATTGTACACAGCAGTCTTAACCAATTGGTAGTGAA
TTGAAGTTATAGAATATCAAGATGACGATTCCTGACGAGGTTGACATCATCGTGTGCGGT
GGCGGATCATGCGGTTGCGTCGTGGCCGGCCGCTTGGCCAACCTAGACCACAACCTCCAA
GTCCTCTTGATTGAGGGCGGAGAGAACAACTTGAACAACCCATGGGTATTCCGTCCGGGT
ATCTACCCCAGGAATATGAAGCTGGACAGCAAGACTGCCTCCTTCTACTACTCCCGGCCA
TCAGAGTGGCTTGACGGACGACGAGCTGTCGTGCCATGTGCTCATATTCTTGGAGGTGGA
TCTTCCATCAACTTCATGATGTACACCCGCGCCTCGGCCTCGGACTACGATGACTTCCAG
GCCAAGGGCTGGACTACCAAGGAACTCCTCCCTCTTATGAAGAAGCACGAGACATACCAG
CGAGCTTGCAACAACCGCGACATCCACGGCTTCGAGGGCCCCATCAAAGTGTCATTTGGC
AACTACACATACCCGATCAAGGAGGACTTCCTGCGTGCTACCGAGACTCAAGGCATCCCC
ACTACTGATGATCTCCAGGACCTTGTGACTGGCCACGGTGCTGAGCATTGGCTCAAGTGG
ATCAACAGGGACACGGGTCGACGATCTGACCCTGCGCATGGGTACATTCATAGCACGAGG
GCTGTGCACCAGAACTTGCACTTGCTTACCAGCAACAAGGTTGAGAAGGTCATTCTTGAA
GGCGACCGTGCTGTTGGCGTCAAGGTCGTTCCCACCAAGCACCTGTCCAACGCTCAGGTC
CCGTCTCGCATCATCAGAGCTCGCAAGCAAATCATCGTGTCTGGCGGCACTCTGAGCTCA
CCCCTCATTCTCCAACGCTCTGGTATCGGTGACCCAGAGAAGCTTCGCAAGGCTGGCATC
AAGCCTCTTGTCGACTTGCCTGGTGTGGGATTGAACTTCCAAGATCACTATCTTACCTTC
GCCACCTACCGCGCAAAGCCACATGTCGAGTCTTTCGACGACTTTGCGCGCGGCGATCCC
GCAACGCAAGAACGCGTCTTCCAGCAATGGAATATTAACGGCACTGGCCCGCTCGCCACC
AACGGCATTGAAGCTGGCGTCAAGATCCGCCCCACCGAAGACGAGCTCAAGATGATGGAC
AGCTGGCCATGTCCCGAGTTCCGCTCCGGCTGGGACAGCTACTTCAAAGACAAGCCCGAC
AAGCCCGTGATGCACTACTCGGTCATCGCAGGCTGGTTCGGCGACCACATGGTCATGCCG
CCGGGCAAGTTCTTCACCATGTTCCACTTCCTGGAGTATCCGTTCTCCCGCGGATCGACG
CACATTGTGTCGCCGAACCCGTACGAGGCCCCGGACTTTGATGCGGGCTTCATGAACGAT
AAGAGGGATATGGCGCCGATGGTGTGGGGATATGTCAAGTCGCGTGAGACGGCGAGACGC
ATGGATGCGTATGCGGGTGAGGTGCAAGCTATGCATCCTTTCTATGCGTATGATAGTCCT
GCGCGCGCGAAAGACCTGGATCTCGCGACTACGAATGCGTATGCGCTACCAGGAAACATC
ACGGCGGGTATCCAGCATGGAAGCTGGACGATGCCTATGGAGAAGGGACGCGCGCCCGAG
CCGAACTTTTTGAACTCGAATTGTCAGGAGGTGCTTCCTGATCTTGAGTACTCGAAGGAG
GATATCGAGCATGTGATTAACTGGACCAAGCGCCACGTCGAAACGACCTGGCACTCCCTC
GGCACGTGTTCCATGGCCCCACGCGAAGGCAACTCCATCGTCAAGCACGGCGTGCTCGAC
GAGCGCCTCAACGTACACGGTGTCAAGGGCCTCAAGGTCGCTGACCTGTCCATCTGCCCC
GACAACGTGGGCTGCAACACGTACAGCACTGCGCTGTTGATTGGCGAGAAGTGCGCTGTG
TTGGTGGGTGAGGACCTTGGATATTCTGGATCGGCGCTGGATATGAAGGTTCCGACGTAT
CATGCGCCGAGAGAGGTTGTTGGGTTGTCGAGGTTGTAAGGACGATGGCTTGTGGGATGT
AGCTAGTCTATCTCTGCTTGCTGCTTTGTTGTGCTGGAATGGGGCGCATGGATGTGAAGT
ATGTAAATGACAGAATGAATCACGACG

consensusID : consensus_3338#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2187
fasta sequence

                              [TGACTTGCTCACCTGCGGTCAACTTGCAATAGCTGCATATCGTTTCAACAACAATATAACATTTCCATAAGCCAGCAAGATGACGATCCCGGATGAGGTTGATATTATCGTGTGTGGCGGAGGATCATGCGGATGTGTCGTCGCTGGCCGTTTGGCCAATCTTGACCATAACCTCCAGGTCCTCTTGATTGAGGCTGGTGAGAACAACCTGAACAATCCATGGGTCTTCCGCCCGGGTATCTACCCAAGGAACATGAAGTTGGATAGCAAGACTGCCTCCTTCTACTATTCCAGGCCTTCTGAATGGCTCGATGGACGCCGCGCTGTTGTGCCCTGTGCACACATCCTCGGAGGCGGGTCTTCCATTAATTTCATGATGTACACTCGTGCCTCGGCCTCGGACTACGATGACTTCCAAGCCAAGGGCTGGACCACTAAGGAACTCATTCCTCTTATGAAGAAGCACGAGACTTACCAGCGTGCCTGCAACAACCGTGACATTCACGGATTTGAGGGGCCCATTAAGGTTTCTTTTGGTAACTACACGTATCCCATCAAGGAGGACTTCCTCCGCGCCACTGAATCTCAGGGCATTCCAACCACCGATGATCTTCAGGACTTGGTCACTGGCCATGGTGCCGAGCACTGGCTCAAGTGGATCAACCGTGACACTGGACGTCGCTCCGATTCTGCTCACGGCTATATTCATAGCACCCGTGCCGTTCATCAGAACTTGCACCTGCTGACCAGCAACAAGGTCGAAAAGGTCATTCTCGAGGGTGACCGAGCTGTTGGTGTCAAGGTTGTCCCTACCAAGCCCGTCTCTCCTGGACAGGTCAACTCTAGGATCATCCGCGCCCGCAAGCAGATCATTGTTTCGGGAGGTACCCTGAGCTCACCACTTATTCTTCAGCGCTCTGGCATTGGTGACCCAGAGAAACTGCGAAAGGCTGGTGTGAAGCCCCTCGTTGACCTTCCTGGTGTAGGTCTCAACTTCCAGGATCACTACCTGACTTTTGCCACATACCGTGCGAAGCCGCATGTGGAGTCATTTGATGACTTCATCCGTGGTGACCCCAAGGTTCAAGAGCAAGTCTTCCAACAGTGGAACATTAACGGCACTGGCCCACTTGCTACCAATGGTATCGAGGCTGGTGTCAAGATCCGCCCTACCGAGGAAGAACTCAAGATGATGGACAGCTGGCCATGCAAGGAGTTCCGTTCTGGCTGGGACTCCTACTTCAAGAACAAGCCCGACAAGCCAGTTATGCACTACTCGGTCATTGCAGGCTGGTTCGGTGACCACATGGTCATGCCACCAGGCAAGTTCTTCACCATGTTCCACTTCCTTGAGTACCCATTCTCTCGTGGCTCTACGCACATTGTCTCGCCAAACCCATACGAGGCACCAGACTTTGACGCCGGATTCATGAATGACAAGCGAGACATGGCCCCAATGGTGTGGGGATACATCAAGTCGCGCGAGACCGCACGCCGAATGGACGCATATGCCGGAGAGGTTCAGGCCATGCACCCCTTCTACGCATACGACAGCCCAGCCCGCGCACGCGACATGGACCTCGCCACCACCAATGCATACGCCCTTCCTGGTAACCTCTCGGCTGGTATTCAACACGGCTCCTGGACCGCGCCCTTGGAGAAGGGTCGCGTCCCCCAGCCCACTTACTTGAACTCCAACCAGCAAGAAGTCTTTGAAGACTTGCAATACTCCAACGAAGACATCAAGCATATTGAAGACTGGGTCAAGCGCCACGTCGAAACCACCTGGCACTCCCTCGGCACGTGCTCCATGGCCCCCAAGAACGGCAACTCCATTGTCAAGCACGGCGTCCTCGACGAGCGCCTCAACGTCCACGGCGTAAAGGGCCTCAAGGTCGCCGATCTGTCCATCTGCCCAGACAACGTCGGCTGCAACACGTACTCGACTGCCCTGCTCATTGGTGAGAAGTGCGCTGTGCTCACGGCTGAGGACCTCGGATACAGCGGTAGCGCGCTCGATATGAAGGTGCCAAACTACCATGCGCCTAGAGAGGTGGTTGGCTTGTCGCGCTTGTAGAGAGAGAGAGAGGGAAAAAAAGGGGGGGAGTTGTGTGTATTTGTAGCATGGATGAGATTAAGTTGGTATCTATGGCGAAGAAAATCACAAGTATGGATGCTATGTATATA]

[+] EMBL AK109844             [TGACTTGCTCACCTGCGGTCAACTTGCAATAGCTGCATATCGTTTCAACAACAATATAACATTTCCATAAGCCAGCAAGATGACGATCCCGGATGAGGTTGATATTATCGTGTGTGGCGGAGGATCATGCGGATGTGTCGTCGCTGGCCGTTTGGCCAATCTTGACCATAACCTCCAGGTCCTCTTGATTGAGGCTGGTGAGAACAACCTGAACAATCCATGGGTCTTCCGCCCGGGTATCTACCCAAGGAACATGAAGTTGGATAGCAAGACTGCCTCCTTCTACTATTCCAGGCCTTCTGAATGGCTCGATGGACGCCGCGCTGTTGTGCCCTGTGCACACATCCTCGGAGGCGGGTCTTCCATTAATTTCATGATGTACACTCGTGCCTCGGCCTCGGACTACGATGACTTCCAAGCCAAGGGCTGGACCACTAAGGAACTCATTCCTCTTATGAAGAAGCACGAGACTTACCAGCGTGCCTGCAACAACCGTGACATTCACGGATTTGAGGGGCCCATTAAGGTTTCTTTTGGTAACTACACGTATCCCATCAAGGAGGACTTCCTCCGCGCCACTGAATCTCAGGGCATTCCAACCACCGATGATCTTCAGGACTTGGTCACTGGCCATGGTGCCGAGCACTGGCTCAAGTGGATCAACCGTGACACTGGACGTCGCTCCGATTCTGCTCACGGCTATATTCATAGCACCCGTGCCGTTCATCAGAACTTGCACCTGCTGACCAGCAACAAGGTCGAAAAGGTCATTCTCGAGGGTGACCGAGCTGTTGGTGTCAAGGTTGTCCCTACCAAGCCCGTCTCTCCTGGACAGGTCAACTCTAGGATCATCCGCGCCCGCAAGCAGATCATTGTTTCGGGAGGTACCCTGAGCTCACCACTTATTCTTCAGCGCTCTGGCATTGGTGACCCAGAGAAACTGCGAAAGGCTGGTGTGAAGCCCCTCGTTGACCTTCCTGGTGTAGGTCTCAACTTCCAGGATCACTACCTGACTTTTGCCACATACCGTGCGAAGCCGCATGTGGAGTCATTTGATGACTTCATCCGTGGTGACCCCAAGGTTCAAGAGCAAGTCTTCCAACAGTGGAACATTAACGGCACTGGCCCACTTGCTACCAATGGTATCGAGGCTGGTGTCAAGATCCGCCCTACCGAGGAAGAACTCAAGATGATGGACAGCTGGCCATGCAAGGAGTTCCGTTCTGGCTGGGACTCCTACTTCAAGAACAAGCCCGACAAGCCAGTTATGCACTACTCGGTCATTGCAGGCTGGTTCGGTGACCACATGGTCATGCCACCAGGCAAGTTCTTCACCATGTTCCACTTCCTTGAGTACCCATTCTCTCGTGGCTCTACGCACATTGTCTCGCCAAACCCATACGAGGCACCAGACTTTGACGCCGGATTCATGAATGACAAGCGAGACATGGCCCCAATGGTGTGGGGATACATCAAGTCGCGCGAGACCGCACGCCGAATGGACGCATATGCCGGAGAGGTTCAGGCCATGCACCCCTTCTACGCATACGACAGCCCAGCCCGCGCACGCGACATGGACCTCGCCACCACCAATGCATACGCCCTTCCTGGTAACCTCTCGGCTGGTATTCAACACGGCTCCTGGACCGCGCCCTTGGAGAAGGGTCGCGTCCCCCAGCCCACTTACTTGAACTCCAACCAGCAAGAAGTCTTTGAAGACTTGCAATACTCCAACGAAGACATCAAGCATATTGAAGACTGGGTCAAGCGCCACGTCGAAACCACCTGGCACTCCCTCGGCACGTGCTCCATGGCCCCCAAGAACGGCAACTCCATTGTCAAGCACGGCGTCCTCGACGAGCGCCTCAACGTCCACGGCGTAAAGGGCCTCAAGGTCGCCGATCTGTCCATCTGCCCAGACAACGTCGGCTGCAACACGTACTCGACTGCCCTGCTCATTGGTGAGAAGTGCGCTGTGCTCACGGCTGAGGACCTCGGATACAGCGGTAGCGCGCTCGATATGAAGGTGCCAAACTACCATGCGCCTAGAGAGGTGGTTGGCTTGTCGCGCTTGTAGAGAGAGAGAGAGGGAAAAAAAGGGGGGGAGTTGTGTGTATTTGTAGCATGGATGAGATTAAGTTGGTATCTATGGCGAAGAAAATCACAAGTATGGATGCTATGTATATA]




>consensus_3338#1
TGACTTGCTCACCTGCGGTCAACTTGCAATAGCTGCATATCGTTTCAACAACAATATAAC
ATTTCCATAAGCCAGCAAGATGACGATCCCGGATGAGGTTGATATTATCGTGTGTGGCGG
AGGATCATGCGGATGTGTCGTCGCTGGCCGTTTGGCCAATCTTGACCATAACCTCCAGGT
CCTCTTGATTGAGGCTGGTGAGAACAACCTGAACAATCCATGGGTCTTCCGCCCGGGTAT
CTACCCAAGGAACATGAAGTTGGATAGCAAGACTGCCTCCTTCTACTATTCCAGGCCTTC
TGAATGGCTCGATGGACGCCGCGCTGTTGTGCCCTGTGCACACATCCTCGGAGGCGGGTC
TTCCATTAATTTCATGATGTACACTCGTGCCTCGGCCTCGGACTACGATGACTTCCAAGC
CAAGGGCTGGACCACTAAGGAACTCATTCCTCTTATGAAGAAGCACGAGACTTACCAGCG
TGCCTGCAACAACCGTGACATTCACGGATTTGAGGGGCCCATTAAGGTTTCTTTTGGTAA
CTACACGTATCCCATCAAGGAGGACTTCCTCCGCGCCACTGAATCTCAGGGCATTCCAAC
CACCGATGATCTTCAGGACTTGGTCACTGGCCATGGTGCCGAGCACTGGCTCAAGTGGAT
CAACCGTGACACTGGACGTCGCTCCGATTCTGCTCACGGCTATATTCATAGCACCCGTGC
CGTTCATCAGAACTTGCACCTGCTGACCAGCAACAAGGTCGAAAAGGTCATTCTCGAGGG
TGACCGAGCTGTTGGTGTCAAGGTTGTCCCTACCAAGCCCGTCTCTCCTGGACAGGTCAA
CTCTAGGATCATCCGCGCCCGCAAGCAGATCATTGTTTCGGGAGGTACCCTGAGCTCACC
ACTTATTCTTCAGCGCTCTGGCATTGGTGACCCAGAGAAACTGCGAAAGGCTGGTGTGAA
GCCCCTCGTTGACCTTCCTGGTGTAGGTCTCAACTTCCAGGATCACTACCTGACTTTTGC
CACATACCGTGCGAAGCCGCATGTGGAGTCATTTGATGACTTCATCCGTGGTGACCCCAA
GGTTCAAGAGCAAGTCTTCCAACAGTGGAACATTAACGGCACTGGCCCACTTGCTACCAA
TGGTATCGAGGCTGGTGTCAAGATCCGCCCTACCGAGGAAGAACTCAAGATGATGGACAG
CTGGCCATGCAAGGAGTTCCGTTCTGGCTGGGACTCCTACTTCAAGAACAAGCCCGACAA
GCCAGTTATGCACTACTCGGTCATTGCAGGCTGGTTCGGTGACCACATGGTCATGCCACC
AGGCAAGTTCTTCACCATGTTCCACTTCCTTGAGTACCCATTCTCTCGTGGCTCTACGCA
CATTGTCTCGCCAAACCCATACGAGGCACCAGACTTTGACGCCGGATTCATGAATGACAA
GCGAGACATGGCCCCAATGGTGTGGGGATACATCAAGTCGCGCGAGACCGCACGCCGAAT
GGACGCATATGCCGGAGAGGTTCAGGCCATGCACCCCTTCTACGCATACGACAGCCCAGC
CCGCGCACGCGACATGGACCTCGCCACCACCAATGCATACGCCCTTCCTGGTAACCTCTC
GGCTGGTATTCAACACGGCTCCTGGACCGCGCCCTTGGAGAAGGGTCGCGTCCCCCAGCC
CACTTACTTGAACTCCAACCAGCAAGAAGTCTTTGAAGACTTGCAATACTCCAACGAAGA
CATCAAGCATATTGAAGACTGGGTCAAGCGCCACGTCGAAACCACCTGGCACTCCCTCGG
CACGTGCTCCATGGCCCCCAAGAACGGCAACTCCATTGTCAAGCACGGCGTCCTCGACGA
GCGCCTCAACGTCCACGGCGTAAAGGGCCTCAAGGTCGCCGATCTGTCCATCTGCCCAGA
CAACGTCGGCTGCAACACGTACTCGACTGCCCTGCTCATTGGTGAGAAGTGCGCTGTGCT
CACGGCTGAGGACCTCGGATACAGCGGTAGCGCGCTCGATATGAAGGTGCCAAACTACCA
TGCGCCTAGAGAGGTGGTTGGCTTGTCGCGCTTGTAGAGAGAGAGAGAGGGAAAAAAAGG
GGGGGAGTTGTGTGTATTTGTAGCATGGATGAGATTAAGTTGGTATCTATGGCGAAGAAA
ATCACAAGTATGGATGCTATGTATATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3338#0      TGATTCTCGGACTTCTGAGGTAGCAATTGTACACAGCAGTCTTAACCAATTGGTAGTGAA 60
consensus_3338#1      TGA--CTTGCTCACCTGCGGT--CAACTTGCAATAGCTG-CATATCGTTTCAACAACAAT 55
                      ***  ** *  *  *** ***  *** *    * *** * * ** *   *    *   * 

consensus_3338#0      TTGAAGTT---ATAGAATATCAAGATGACGATTCCTGACGAGGTTGACATCATCGTGTGC 117
consensus_3338#1      ATAACATTTCCATAAGCCAGCAAGATGACGATCCCGGATGAGGTTGATATTATCGTGTGT 115
                       * *  **   ***    * ************ ** ** ******** ** ******** 

consensus_3338#0      GGTGGCGGATCATGCGGTTGCGTCGTGGCCGGCCGCTTGGCCAACCTAGACCACAACCTC 177
consensus_3338#1      GGCGGAGGATCATGCGGATGTGTCGTCGCTGGCCGTTTGGCCAATCTTGACCATAACCTC 175
                      ** ** *********** ** ***** ** ***** ******** ** ***** ******

consensus_3338#0      CAAGTCCTCTTGATTGAGGGCGGAGAGAACAACTTGAACAACCCATGGGTATTCCGTCCG 237
consensus_3338#1      CAGGTCCTCTTGATTGAGGCTGGTGAGAACAACCTGAACAATCCATGGGTCTTCCGCCCG 235
                      ** ****************  ** ********* ******* ******** ***** ***

consensus_3338#0      GGTATCTACCCCAGGAATATGAAGCTGGACAGCAAGACTGCCTCCTTCTACTACTCCCGG 297
consensus_3338#1      GGTATCTACCCAAGGAACATGAAGTTGGATAGCAAGACTGCCTCCTTCTACTATTCCAGG 295
                      *********** ***** ****** **** *********************** *** **

consensus_3338#0      CCATCAGAGTGGCTTGACGGACGACGAGCTGTCGTGCCATGTGCTCATATTCTTGGAGGT 357
consensus_3338#1      CCTTCTGAATGGCTCGATGGACGCCGCGCTGTTGTGCCCTGTGCACACATCCTCGGAGGC 355
                      ** ** ** ***** ** ***** ** ***** ***** ***** ** ** ** ***** 

consensus_3338#0      GGATCTTCCATCAACTTCATGATGTACACCCGCGCCTCGGCCTCGGACTACGATGACTTC 417
consensus_3338#1      GGGTCTTCCATTAATTTCATGATGTACACTCGTGCCTCGGCCTCGGACTACGATGACTTC 415
                      ** ******** ** ************** ** ***************************

consensus_3338#0      CAGGCCAAGGGCTGGACTACCAAGGAACTCCTCCCTCTTATGAAGAAGCACGAGACATAC 477
consensus_3338#1      CAAGCCAAGGGCTGGACCACTAAGGAACTCATTCCTCTTATGAAGAAGCACGAGACTTAC 475
                      ** ************** ** ********* * *********************** ***

consensus_3338#0      CAGCGAGCTTGCAACAACCGCGACATCCACGGCTTCGAGGGCCCCATCAAAGTGTCATTT 537
consensus_3338#1      CAGCGTGCCTGCAACAACCGTGACATTCACGGATTTGAGGGGCCCATTAAGGTTTCTTTT 535
                      ***** ** *********** ***** ***** ** ***** ***** ** ** ** ***

consensus_3338#0      GGCAACTACACATACCCGATCAAGGAGGACTTCCTGCGTGCTACCGAGACTCAAGGCATC 597
consensus_3338#1      GGTAACTACACGTATCCCATCAAGGAGGACTTCCTCCGCGCCACTGAATCTCAGGGCATT 595
                      ** ******** ** ** ***************** ** ** ** **  **** ***** 

consensus_3338#0      CCCACTACTGATGATCTCCAGGACCTTGTGACTGGCCACGGTGCTGAGCATTGGCTCAAG 657
consensus_3338#1      CCAACCACCGATGATCTTCAGGACTTGGTCACTGGCCATGGTGCCGAGCACTGGCTCAAG 655
                      ** ** ** ******** ****** * ** ******** ***** ***** *********

consensus_3338#0      TGGATCAACAGGGACACGGGTCGACGATCTGACCCTGCGCATGGGTACATTCATAGCACG 717
consensus_3338#1      TGGATCAACCGTGACACTGGACGTCGCTCCGATTCTGCTCACGGCTATATTCATAGCACC 715
                      ********* * ***** ** ** ** ** **  **** ** ** ** *********** 

consensus_3338#0      AGGGCTGTGCACCAGAACTTGCACTTGCTTACCAGCAACAAGGTTGAGAAGGTCATTCTT 777
consensus_3338#1      CGTGCCGTTCATCAGAACTTGCACCTGCTGACCAGCAACAAGGTCGAAAAGGTCATTCTC 775
                       * ** ** ** ************ **** ************** ** *********** 

consensus_3338#0      GAAGGCGACCGTGCTGTTGGCGTCAAGGTCGTTCCCACCAAGCACCTGTCCAACGCTCAG 837
consensus_3338#1      GAGGGTGACCGAGCTGTTGGTGTCAAGGTTGTCCCTACCAAGCCCGTCTCTCCTGGACAG 835
                      ** ** ***** ******** ******** ** ** ******* * * **    *  ***

consensus_3338#0      GTCCCGTCTCGCATCATCAGAGCTCGCAAGCAAATCATCGTGTCTGGCGGCACTCTGAGC 897
consensus_3338#1      GTCAACTCTAGGATCATCCGCGCCCGCAAGCAGATCATTGTTTCGGGAGGTACCCTGAGC 895
                      ***   *** * ****** * ** ******** ***** ** ** ** ** ** ******

consensus_3338#0      TCACCCCTCATTCTCCAACGCTCTGGTATCGGTGACCCAGAGAAGCTTCGCAAGGCTGGC 957
consensus_3338#1      TCACCACTTATTCTTCAGCGCTCTGGCATTGGTGACCCAGAGAAACTGCGAAAGGCTGGT 955
                      ***** ** ***** ** ******** ** ************** ** ** ******** 

consensus_3338#0      ATCAAGCCTCTTGTCGACTTGCCTGGTGTGGGATTGAACTTCCAAGATCACTATCTTACC 1017
consensus_3338#1      GTGAAGCCCCTCGTTGACCTTCCTGGTGTAGGTCTCAACTTCCAGGATCACTACCTGACT 1015
                       * ***** ** ** *** * ******** **  * ******** ******** ** ** 

consensus_3338#0      TTCGCCACCTACCGCGCAAAGCCACATGTCGAGTCTTTCGACGACTTTGCGCGCGGCGAT 1077
consensus_3338#1      TTTGCCACATACCGTGCGAAGCCGCATGTGGAGTCATTTGATGACTTCATCCGTGGTGAC 1075
                      ** ***** ***** ** ***** ***** ***** ** ** *****    ** ** ** 

consensus_3338#0      CCCGCAACGCAAGAACGCGTCTTCCAGCAATGGAATATTAACGGCACTGGCCCGCTCGCC 1137
consensus_3338#1      CCCAAGGTTCAAGAGCAAGTCTTCCAACAGTGGAACATTAACGGCACTGGCCCACTTGCT 1135
                      ***      ***** *  ******** ** ***** ***************** ** ** 

consensus_3338#0      ACCAACGGCATTGAAGCTGGCGTCAAGATCCGCCCCACCGAAGACGAGCTCAAGATGATG 1197
consensus_3338#1      ACCAATGGTATCGAGGCTGGTGTCAAGATCCGCCCTACCGAGGAAGAACTCAAGATGATG 1195
                      ***** ** ** ** ***** ************** ***** ** ** ************

consensus_3338#0      GACAGCTGGCCATGTCCCGAGTTCCGCTCCGGCTGGGACAGCTACTTCAAAGACAAGCCC 1257
consensus_3338#1      GACAGCTGGCCATGCAAGGAGTTCCGTTCTGGCTGGGACTCCTACTTCAAGAACAAGCCC 1255
                      **************    ******** ** *********  *********  ********

consensus_3338#0      GACAAGCCCGTGATGCACTACTCGGTCATCGCAGGCTGGTTCGGCGACCACATGGTCATG 1317
consensus_3338#1      GACAAGCCAGTTATGCACTACTCGGTCATTGCAGGCTGGTTCGGTGACCACATGGTCATG 1315
                      ******** ** ***************** ************** ***************

consensus_3338#0      CCGCCGGGCAAGTTCTTCACCATGTTCCACTTCCTGGAGTATCCGTTCTCCCGCGGATCG 1377
consensus_3338#1      CCACCAGGCAAGTTCTTCACCATGTTCCACTTCCTTGAGTACCCATTCTCTCGTGGCTCT 1375
                      ** ** ***************************** ***** ** ***** ** ** ** 

consensus_3338#0      ACGCACATTGTGTCGCCGAACCCGTACGAGGCCCCGGACTTTGATGCGGGCTTCATGAAC 1437
consensus_3338#1      ACGCACATTGTCTCGCCAAACCCATACGAGGCACCAGACTTTGACGCCGGATTCATGAAT 1435
                      *********** ***** ***** ******** ** ******** ** ** ******** 

consensus_3338#0      GATAAGAGGGATATGGCGCCGATGGTGTGGGGATATGTCAAGTCGCGTGAGACGGCGAGA 1497
consensus_3338#1      GACAAGCGAGACATGGCCCCAATGGTGTGGGGATACATCAAGTCGCGCGAGACCGCACGC 1495
                      ** *** * ** ***** ** **************  ********** ***** **  * 

consensus_3338#0      CGCATGGATGCGTATGCGGGTGAGGTGCAAGCTATGCATCCTTTCTATGCGTATGATAGT 1557
consensus_3338#1      CGAATGGACGCATATGCCGGAGAGGTTCAGGCCATGCACCCCTTCTACGCATACGACAGC 1555
                      ** ***** ** ***** ** ***** ** ** ***** ** ***** ** ** ** ** 

consensus_3338#0      CCTGCGCGCGCGAAAGACCTGGATCTCGCGACTACGAATGCGTATGCGCTACCAGGAAAC 1617
consensus_3338#1      CCAGCCCGCGCACGCGACATGGACCTCGCCACCACCAATGCATACGCCCTTCCTGGTAAC 1615
                      ** ** *****    *** **** ***** ** ** ***** ** ** ** ** ** ***

consensus_3338#0      ATCACGGCGGGTATCCAGCATGGAAGCTGGACGATGCCTATGGAGAAGGGACGCGCGCCC 1677
consensus_3338#1      CTCTCGGCTGGTATTCAACACGGCTCCTGGACCGCGCCCTTGGAGAAGGGTCGCGTCCCC 1675
                       ** **** ***** ** ** **   ******   ***  ********** ****  ***

consensus_3338#0      GAGCCGAACTTTTTGAACTCGAATTGTCAGGAGGTGCTTCCTGATCTTGAGTACTCGAAG 1737
consensus_3338#1      CAGCCCACTTACTTGAACTCCAACCAGCAAGAAGTCTTTGAAGACTTGCAATACTCCAAC 1735
                       **** *  *  ******** **    ** ** **  **   **  *  * ***** ** 

consensus_3338#0      GAGGATATCGAGCATGTGATTAACTGGACCAAGCGCCACGTCGAAACGACCTGGCACTCC 1797
consensus_3338#1      GAAGACATCAAGCATATTGAAGACTGGGTCAAGCGCCACGTCGAAACCACCTGGCACTCC 1795
                      ** ** *** ***** *     *****  ****************** ************

consensus_3338#0      CTCGGCACGTGTTCCATGGCCCCACGCGAAGGCAACTCCATCGTCAAGCACGGCGTGCTC 1857
consensus_3338#1      CTCGGCACGTGCTCCATGGCCCCCAAGAACGGCAACTCCATTGTCAAGCACGGCGTCCTC 1855
                      *********** ***********     * *********** ************** ***

consensus_3338#0      GACGAGCGCCTCAACGTACACGGTGTCAAGGGCCTCAAGGTCGCTGACCTGTCCATCTGC 1917
consensus_3338#1      GACGAGCGCCTCAACGTCCACGGCGTAAAGGGCCTCAAGGTCGCCGATCTGTCCATCTGC 1915
                      ***************** ***** ** ***************** ** ************

consensus_3338#0      CCCGACAACGTGGGCTGCAACACGTACAGCACTGCGCTGTTGATTGGCGAGAAGTGCGCT 1977
consensus_3338#1      CCAGACAACGTCGGCTGCAACACGTACTCGACTGCCCTGCTCATTGGTGAGAAGTGCGCT 1975
                      ** ******** ***************   ***** *** * ***** ************

consensus_3338#0      GTGTTGGTGGGTGAGGACCTTGGATATTCTGGATCGGCGCTGGATATGAAGGTTCCGACG 2037
consensus_3338#1      GTGCTCACGGCTGAGGACCTCGGATACAGCGGTAGCGCGCTCGATATGAAGGTGCCAAAC 2035
                      *** *   ** ********* *****    **    ***** *********** ** *  

consensus_3338#0      TATCATGCGCCGAGAGAGGTTGTTGGGTTGTCGAGGTTGTAAGGACGATGGCTTGTGGGA 2097
consensus_3338#1      TACCATGCGCCTAGAGAGGTGGTTGGCTTGTCGCGCTTGTAGAGAGAGAGAGAGGGAAAA 2095
                      ** ******** ******** ***** ****** * *****  **    *    *    *

consensus_3338#0      TGTAGCTAGT--CTATCTCTGCTTGCTGCTTTGTTGTGCTGGAATGGG-GCGCATGGATG 2154
consensus_3338#1      AAAGGGGGGGAGTTGTGTGTATTTGTAGCATGGATGAGATTAAGTTGGTATCTATGGCGA 2155
                          *   *    * * * *  ***  ** * * ** * *  * * **     ****   

consensus_3338#0      TGAAGTATGTAAATGACAGAATGAATCACGACG 2187
consensus_3338#1      AGAAAATCACAAGT-ATGGATGCTATGTATATA 2187
                       ***      ** * *  **    **    *