cluster # 3357

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Oryza sativa
cluster # 3357 cluster # 3357 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3357#0 length = 598 sequences # 2

consensusID : consensus_3357#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 598
fasta sequence

                              [CCCGTCACCCAGTTANAAGTCCCCCCCGNTGCGTCTCCCCGCTCAAACTCCCGGCGTCCTCCCAGATCCCTCNCCGGTTGCCCCGTCANCGTTTTCTTCAGCTCCGCCTACGACTGATCATCCCAATCAAATTAACTATCGATCGACGATCGATCGACAGTAGTAGTTCATGCAGAAGGGGATCGAATTGCA-A-ACCAAAGACG-CAAAGTGTGATTGATGATGATGAACTGGGCATGCAATGTGCAAGCTAGCTGTAGTGACAGAGATGAGGTTGTA-GCTAGAGCATGCAAGATGCAGTGGTCACCATGTTTCGCCAGAAAGGGGNTAAGGANTTAATTCAGCATCAGATTACTGCCGTAGCCTGTAGTAAT-CTGCATGCAGAATTTGCAGGTGCCGAGTGAATTAATTAGGATTGGTACGTAGTGTTGCACCTGTGACNAGTTGAGTTGATCAAGTGGCCACCGGCCAAAAGTATGTGTCATATAGTATTAGTGTTTACCTATCTACCATGAATGCATGTGGCCTCCTGTTGATGATGTCCCAGCATCAAATAAACCCTTGGCTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU090481             [CCCGTCACCCAGTTANAAGTCCCCCCCGNTGCGTCTCCCCGCTCAAACTCCCGGCGTCCTCCCAGATCCCTCNCCGGTTGCCCCGTCANCGTTTTCTTCAGCTCCGCCTACGACTGATCATCCCAATCAAATTAACTATCGATCGACGATCGATCGACAGTAGTAGTTCATGCAGAAGGGGATCGAATTGCA A ACCAAAGACG CAAAGTGTGATTGATGATGATGAACTGGGCATGCAATGTGCAAGCTAGCTGTAGTGACAGAGATGAGGTTGTA GCTAGAGCATGCAAGATGCAGTGGTCACCATGTTTCGCCAGAAAGGGGNTAAGGANTTAATTCAGCATCAGATTACTGCCGTAGCCTGTAGTAAT CTGCATGCAGAATTTGCAGGTGCCGAGTGAATTAATTAGGATTGGTACGTAGTGTTGCACCTGTGACNAGTTGAGTTGATCAAGTGGCCACCGGCCAAAAGTATGTGTCATATAGTATTAGTGTTTACCTATCTACCATGAATGCATGTGGCCTCCTGTTGATGATGTCCCAGCATCAAATAAACCCTTGGCTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI797348             [                                                                                                                                                         cgtACAGTAGTAGTTCATGCAGAAGGGGATCGAATTGCAGATACCATAGACGCCAATGTGTGATTGATGATGATGAACTGGGCATGCAATGTGCAAGCTAGCTGTAGTGACAGAGATGAGGTTGTATGCTAGAGCATGCAAGATGCAGTGGTCACCATGTTTCGCCAGAAAGGGGATAAGGAATTAATTCAGCATCAGATTACTGCCGTAGCCTGTAGTAATGCTGCATGCAGAATTTGCAGGTGCCGAGTGAATTAATTAGGATTGGTACGTAGTGTTGCACCTGTGACCAGTTGAGTTGATCAAGTGGCCACCGGCCAAAAGTATGTGTCATATAGTATTAGTGTTTACCTATCTACCATGAATGCATGTGGCCTCCTGTTGATGATGTCCCAGCATC AATAAAaaaaa                                      ]




>consensus_3357#0
CCCGTCACCCAGTTANAAGTCCCCCCCGNTGCGTCTCCCCGCTCAAACTCCCGGCGTCCT
CCCAGATCCCTCNCCGGTTGCCCCGTCANCGTTTTCTTCAGCTCCGCCTACGACTGATCA
TCCCAATCAAATTAACTATCGATCGACGATCGATCGACAGTAGTAGTTCATGCAGAAGGG
GATCGAATTGCAAACCAAAGACGCAAAGTGTGATTGATGATGATGAACTGGGCATGCAAT
GTGCAAGCTAGCTGTAGTGACAGAGATGAGGTTGTAGCTAGAGCATGCAAGATGCAGTGG
TCACCATGTTTCGCCAGAAAGGGGNTAAGGANTTAATTCAGCATCAGATTACTGCCGTAG
CCTGTAGTAATCTGCATGCAGAATTTGCAGGTGCCGAGTGAATTAATTAGGATTGGTACG
TAGTGTTGCACCTGTGACNAGTTGAGTTGATCAAGTGGCCACCGGCCAAAAGTATGTGTC
ATATAGTATTAGTGTTTACCTATCTACCATGAATGCATGTGGCCTCCTGTTGATGATGTC
CCAGCATCAAATAAACCCTTGGCTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case