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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3384 cluster # 3384       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3384#0 length = 806 sequences # 2  

consensusID : consensus_3384#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 806
fasta sequence
                              [CGAGACACGGGGGCAGTCTTAGAGAGCCTTCAGACGCTACACCTCGTCTCAGAAATACANATACACACAACACANACATGTCTCTGGAACGTCAAGTTCGTGCCAAGCTCGCTTCCGAGCGCAACCCCGAGCAGGAGAANGAAGCCCAGGAATGGATTGAGGCAGTTCTTGGTGCCAAATTCCCTCCCGGCGAAGTCTTTGAAGATGTCCTCAAGGACGGCACAGTTCTCTGCCAACTCATGAACAAGCTGAAACCCGGCTCCATCCCCAAAATCAACACCTCTGGTGGACAGTTTAAAATGATGGAAAACATCACCAACTTCCAGGCCGCCATGAAAGCATATGGTGTCCCAGATATTGATGTATTCCAAACTGTCGACCTTTGGGAGAAGAAAGACATCGCTCAAGTTGTCAGCACACTGTTCGCCCTTGGCCGTGAGACCTACAGGCACTCTGAATGGAGCGGCCCCTACCTTGGCCCCAAGCCTGCTGATGAGTGCAAGCGTGATTTCTCCGATGAAGTGCTAAAGGCCGGTCAGACCGTAATCGGTCTGCAGGCTG-GCTCTAACAAAGGTGCCACCCAAGCTGGTCAGAACATGGGCGCTGGCCGCAAGATCCTCCTCGGCAAGTGAAAACCTNCAGAGCCTAGCTACAAGNGATATTATTTATAAGATTTGTGTAC-AAAACTAAGTGCAAACGGACACTGTTGT-AAGACT-GTAA-TTTTCCTGCGAGATCTANCCAGACGTGTAGTGCTGGGTCTCATAACAATATGGAGACCCTCATGNATCTACTTAGNGCGTATTTGG]

[+] EMBL CB096550             [CGAGACACGGGGGCAGTCTTAGAGAGCCTTCAGACGCTACACCTCGTCTCAGAAATACANATACACACAACACANACATGTCTCTGGAACGTCAAGTTCGTGCCAAGCTCGCTTCCGAGCGCAACCCCGAGCAGGAGAANGAAGCCCAGGAATGGATTGAGGCAGTTCTTGGTGCCAAATTCCCTCCCGGCGAAGTCTTTGAAGATGTCCTCAAGGACGGCACAGTTCTCTGCCAACTCATGAACAAGCTGAAACCCGGCTCCATCCCCAAAATCAACACCTCTGGTGGACAGTTTAAAATGATGGAAAACATCACCAACTTCCAGGCCGCCATGAAAGCATATGGTGTCCCAGATATTGATGTATTCCAAACTGTCGACCTTTGGGAGAAGAAAGACATCGCTCAAGTTGTCAGCACACTGTTCGCCCTTGGCCGTGAGACCTACAGGCACTCTGAATGGAGCGGCCCCTACCTTGGCCCCAAGCCTGCTGATGAGTGCAAGCGTGATTTCTCCGATGAAGTGCTAAAGGCCGGTCAGACCGTAATCGGTCTGCAGGCTG GCTCTAACAAAGGTGCCACCCAAGCTGGTCAGAACATGGGCGCTGGCCGCAAGATCCTCCTCGGCAAGTGAAAACCTNCAGAGCCTAGCTACAAGNGATATTATTTATAAGATTTGTGTAC AAAACTAAGTGCAAACGGACACTGTTGT AAGACT GTAA TTTTCCTGCGAGATCTANCCAGACGTGTAGTGCTGGGTCTCATAACAATATGGAGACCCTCATGNATCTACTTAGNGCGTATTTGG]
[+] EMBL CA767273             [CGAGACACGGGGGCAGTCTTAGAGAGCCTT AGACGCTACACCTCGTCT ANAAATACANATACACACAACACATACATGTCTNTGGAACGNTAAGTTCGTGCCAAGCTCGCTTCCGAGCGCAACCCCGAGCAGGAGAAAGAAGCCCAGGAATGGATTGAGGCAGTTCTTGGNGCCAAATTCCCTCCCGGCGAAGTCTTTGAAGATGTCCTCAAGGACGGCACAGTTCTCTGCCAACTCATGAACAAGCTGAAACCCGGCTCCATCCCCAAAATCAACACCTCTGGTGGACAGTTTANAATGATGGAAAACATCACCAACTTCCAGGCCGCCATGAAAGCATATGGTGTCCCAGATATTGATGTATTCCAAACTGTCGACCTTTGGGAGAAGAAAGACATCGCTCAAGTTGTCAGCACACTGTTCGCCCTTGGCCGTGAGACCTACAGGCACTCTGAATGGAGCGGCCCCTACCTTGTNCCCAAGCCTGCTGATGAGTGCAAGCGTGATTTCTNCGATGAAGTGCTAAAGGCCGNTCAGACCGTAATCGGTCTGCAGGCTGNCCTCTAACAAAGGTGCCACCCAAGCTGGTCAGAACATGGGCGCTGGCCGCAAGATCCTCCTCGGNAAGTGAAAACCTCCAGAGCCTAGCTACAAGTGATATTATTTATAAGATTTGNGTACAAAAACTAAGTGCAAACGGACACTGGTGTAAANACTGGTAATTTTTCCTGCNAGATCTAACCcaa                                                               ]


>consensus_3384#0 CGAGACACGGGGGCAGTCTTAGAGAGCCTTCAGACGCTACACCTCGTCTCAGAAATACAN ATACACACAACACANACATGTCTCTGGAACGTCAAGTTCGTGCCAAGCTCGCTTCCGAGC GCAACCCCGAGCAGGAGAANGAAGCCCAGGAATGGATTGAGGCAGTTCTTGGTGCCAAAT TCCCTCCCGGCGAAGTCTTTGAAGATGTCCTCAAGGACGGCACAGTTCTCTGCCAACTCA TGAACAAGCTGAAACCCGGCTCCATCCCCAAAATCAACACCTCTGGTGGACAGTTTAAAA TGATGGAAAACATCACCAACTTCCAGGCCGCCATGAAAGCATATGGTGTCCCAGATATTG ATGTATTCCAAACTGTCGACCTTTGGGAGAAGAAAGACATCGCTCAAGTTGTCAGCACAC TGTTCGCCCTTGGCCGTGAGACCTACAGGCACTCTGAATGGAGCGGCCCCTACCTTGGCC CCAAGCCTGCTGATGAGTGCAAGCGTGATTTCTCCGATGAAGTGCTAAAGGCCGGTCAGA CCGTAATCGGTCTGCAGGCTGGCTCTAACAAAGGTGCCACCCAAGCTGGTCAGAACATGG GCGCTGGCCGCAAGATCCTCCTCGGCAAGTGAAAACCTNCAGAGCCTAGCTACAAGNGAT ATTATTTATAAGATTTGTGTACAAAACTAAGTGCAAACGGACACTGTTGTAAGACTGTAA TTTTCCTGCGAGATCTANCCAGACGTGTAGTGCTGGGTCTCATAACAATATGGAGACCCT CATGNATCTACTTAGNGCGTATTTGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)