cluster # 3416

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Oryza sativa
cluster # 3416 cluster # 3416 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3416#0 length = 486 sequences # 2

consensusID : consensus_3416#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 486
fasta sequence

                              [TGATTTCTATATTGTCGACCACACCAATTAGTCCAGTTCATCCTGTCACCAATGTTGTTCCACTTAGTCTTGTGCTTTTGGTTTCTCTGATCAAGGAAGCTTTTGAGGACTGGAAACGTTTCCAGAATGACATGTCAATTAATAACGCACATGTCGATGTGTTACAAGGTCAAAAGTGGGAAACTACTCCATGGAAAAGACTACAAGTTGGAGATATTGTGAGGATCAAACAAGATGGTTATTTCCCTGCAGACTTGCTCTTCTTGTCAAGCACAAACCCAGATGGTGTCTGCTACATAGAGACAGCAAATCTTGATGGGGAAACCAACCTGAAAATAAGGAAGGCTTTGGAGAAAACCTGGGATTACAAAAATCCTGAAAAGGCTTTTGAATTCAAAGGTGAAATACAGTGTGAGCAGCCAAACAATTCACTGTATACATTTACTGGAAATCTTATTGTGGACAAGCAAACCATGCCACTCTCAC]

[+] EMBL CA882828             [TGATTTCTATATTGTCGACCACACCAATTAGTCCAGTTCATCCTGTCACCAATGTTGTTCCACTTAGTCTTGTGCTTTTGGTTTCTCTGATCAAGGAAGCTTTTGAGGACTGGAAACGTTTCCAGAATGACATGTCAATTAATAACGCACATGTCGATGTGTTACAAGGTCAAAAGTGGGAAACTACTCCATGGAAAAGACTACAAGTTGGAGATATTGTGAGGATCAAACAAGATGGTTATTTCCCTGCAGACTTGCTCTTCTTGTCAAGCACAAACCCAGATGGTGTCTGCTACATAGAGACAGCAAATCTTGATGGGGAAACCAACCTGAAAATAAGGAAGGCTTTGGAGAAAACCTGGGATTACAAAAATCCTGAAAAGGCTTTTGAATTCAAAGGTGAAATACAGTGTGAGCAGCCAAACAATTCACTGTATACATTTACTGGAAATCTTATTGTGGACAAGCAAACCATGCCACTCTCAC]
[+] EMBL CA882861             [TGATTTCTATATTGTCGACCACACCAATTAGTCCAGTTCATCCTGTCACCAATGTTGTTCCACTTAGTCTTGTGCTTTTGGTTTCTCTGATCAAGGAAGCTTTTGAGGACTGGAAACGTTTCCAGAATGACATGTCAATTAATAACGCACATGTCGATGTGTTACAAGGTCAAAAGTGGGAAACTACTCCATGGAAAAGACTACAAGTTGGAGATATTGTGAGGATCAAACAAGATGGTTATTTCCCTGCAGACTTGCTCTTCTTGTCAAGCACAAACCCAGATGGTGTCTGCTACATAGAGACAGCAAATCTTGATGGGGAAACCAACCTGAAAATAAGGAAGGCTTTGGAGAAAACCTGGGATTACAAAAATCCTGAAAAGGCTTTTGAATTCAAAGGTGAAATACAGTGTGAGCAGCCAAACAATTCACTGTATACATTTACTGGAAATCTTATTGTGGACAAGCAAACCATGCCACTCTCA ]




>consensus_3416#0
TGATTTCTATATTGTCGACCACACCAATTAGTCCAGTTCATCCTGTCACCAATGTTGTTC
CACTTAGTCTTGTGCTTTTGGTTTCTCTGATCAAGGAAGCTTTTGAGGACTGGAAACGTT
TCCAGAATGACATGTCAATTAATAACGCACATGTCGATGTGTTACAAGGTCAAAAGTGGG
AAACTACTCCATGGAAAAGACTACAAGTTGGAGATATTGTGAGGATCAAACAAGATGGTT
ATTTCCCTGCAGACTTGCTCTTCTTGTCAAGCACAAACCCAGATGGTGTCTGCTACATAG
AGACAGCAAATCTTGATGGGGAAACCAACCTGAAAATAAGGAAGGCTTTGGAGAAAACCT
GGGATTACAAAAATCCTGAAAAGGCTTTTGAATTCAAAGGTGAAATACAGTGTGAGCAGC
CAAACAATTCACTGTATACATTTACTGGAAATCTTATTGTGGACAAGCAAACCATGCCAC
TCTCAC

clustalw multiple alignements is not computed in this case