cluster # 343

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 343 cluster # 343 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_343#0 length = 1692 sequences # 2
consensusID : consensus_343#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1692
fasta sequence
                              [CCTCCACGACGACACAGAGCCCAACTCAACCAGCTCACCAGACGAACCGAGCAAACGATCGAACACCCACCATGCACACCACGAACGGCGCGCCTGCATGCTGCGACGCCAACGCCGACACGCCCCCGCTTCACCTCATCTTCGTGCCCTTCCTCTCGCGCAGCCACTTCGGCCCCGTCACAGCAATGGCAGCCGAAGCCGACGCCTGCCACCGCGGAGGGCGAACCGCCGCAACCATCGTCACCACGCGCCACTTCGCAGCAATGGCCCCGGCATCCGTGCCGGTCCGTGTGGCGCAGTTCGGGTTCCCGGGTGGGCACAACGACTTCTCCCTCCTCCCGGGCGAGGTCTCGGCCGCGGCGTTCTTTGCCGCCGCGGAGGAAGCGTTGGCGCCGGCACTCGGGGCGGCGGTGCGTGGGCTTCTCCGCGAAGGGGGCTCCACCGCCACCGTGACAGTCGTCTCGGACGCGGTGCTCCACTGGGCGCCGCGTGTGGCGCGCGAGTGCGGCGTGCTGCACGTGACGTTCCACACCATCGGTGCCTTCGCCGCTGCCGCCATGGTGGCGATCCATGGACACCTCCACTTACGTGAGGCCATGCCAGACCCGTTCGGCGTCGACGAGGGCTTCCCGCTCCCCGTGAAGCTCCGCGGGGTGCAGGTCAACGAGGAGGCCCTCGTTCACCTCCCCCTCTTCCGCGCCGCCGAGGCCGAGAGCTTCGCCGTCGTCTTCAACAGCTTCGCGGCGCTCGAGGCCGACTTCGCCGAGTACTACCGTAGCCTGGACGGGTCTCCCAAGAAGGTGTTCCTCGTCGGCCCAGCGCGCGCCGCCGTCTCCAAACTCAGCAAAGGCATCGCTGCCGACGGCGTCGACCGGGACCCTATCCTGCAATGGCTCGATGGCCAACCGGCAGGGTCGGTGTTGTACGCGTGCTTCGGGAGCACATGTGGGATGGGCGCGAGCCAGCTCACGGAACTCGCTGCTGGCCTGCGCGCGTCGGGCCGGCCATTCCTCTGGGTCATCCCGACGACGGCGGCGGAGGTAACAGAGCAGGAGGAGCGCGCGTCCAACCACGGCATGGTGGTGGCCGGGCGGTGGGCGCCGCAAGCGGACATCCTGGCGCACCGCGCTGTGGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGATACT--GGAT-GCCATCTCTGCCGGCGTG-CCACT-CGCG-ACTTGG-CCA-TTGCGCGCCG-AGCAGTTCCTCAACGAGGTGTTCCTCGT-CGACGTGCTCCGCGTGGGCGTGCGGGTGCGTGAGGCTGCCGGCAACGCGGCCATGGAGGCGGTGGTGCCGGCCGAGGCGGTGGCGAGAGCGGTGGGTAGGCTGATGGGCGACGACGACGCTGCGGCGAGGAGAGCGAGGGTGGACGAGCTGGGCGTCGCGGCGCGCACAGCCGTGTCCGACGGCGGGTCGTCGTGCGGTGACTGGGCGGAGCTGATAAATCAGCTAAAAGCGTTACAGCTTACATCGTCACGAGACAGACGCACTGATGCAGTGACAAGGGACTGACTCACATGCAGGCCAGTAGTAAACAAATACGGAATACTAAAAGATCAAGATTAATTTATACAAGTTCATAAAAACACAATCCAACATCCTGCCCTTTACCAGTGTATTACTTCCTCTGTTACAGAATAAGTTAATTTAGTACAGGGTGTAACACATC]

[+] EMBL AK064709             [CCTCCACGACGACACAGAGCCCAACTCAACCAGCTCACCAGACGAACCGAGCAAACGATCGAACACCCACCATGCACACCACGAACGGCGCGCCTGCATGCTGCGACGCCAACGCCGACACGCCCCCGCTTCACCTCATCTTCGTGCCCTTCCTCTCGCGCAGCCACTTCGGCCCCGTCACAGCAATGGCAGCCGAAGCCGACGCCTGCCACCGCGGAGGGCGAACCGCCGCAACCATCGTCACCACGCGCCACTTCGCAGCAATGGCCCCGGCATCCGTGCCGGTCCGTGTGGCGCAGTTCGGGTTCCCGGGTGGGCACAACGACTTCTCCCTCCTCCCGGGCGAGGTCTCGGCCGCGGCGTTCTTTGCCGCCGCGGAGGAAGCGTTGGCGCCGGCACTCGGGGCGGCGGTGCGTGGGCTTCTCCGCGAAGGGGGCTCCACCGCCACCGTGACAGTCGTCTCGGACGCGGTGCTCCACTGGGCGCCGCGTGTGGCGCGCGAGTGCGGCGTGCTGCACGTGACGTTCCACACCATCGGTGCCTTCGCCGCTGCCGCCATGGTGGCGATCCATGGACACCTCCACTTACGTGAGGCCATGCCAGACCCGTTCGGCGTCGACGAGGGCTTCCCGCTCCCCGTGAAGCTCCGCGGGGTGCAGGTCAACGAGGAGGCCCTCGTTCACCTCCCCCTCTTCCGCGCCGCCGAGGCCGAGAGCTTCGCCGTCGTCTTCAACAGCTTCGCGGCGCTCGAGGCCGACTTCGCCGAGTACTACCGTAGCCTGGACGGGTCTCCCAAGAAGGTGTTCCTCGTCGGCCCAGCGCGCGCCGCCGTCTCCAAACTCAGCAAAGGCATCGCTGCCGACGGCGTCGACCGGGACCCTATCCTGCAATGGCTCGATGGCCAACCGGCAGGGTCGGTGTTGTACGCGTGCTTCGGGAGCACATGTGGGATGGGCGCGAGCCAGCTCACGGAACTCGCTGCTGGCCTGCGCGCGTCGGGCCGGCCATTCCTCTGGGTCATCCCGACGACGGCGGCGGAGGTAACAGAGCAGGAGGAGCGCGCGTCCAACCACGGCATGGTGGTGGCCGGGCGGTGGGCGCCGCAAGCGGACATCCTGGCGCACCGCGCTGTGGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGATACT  GGAT GCCATCTCTGCCGGCGTG CCACT CGCG ACTTGG CCA TTGCGCGCCG AGCAGTTCCTCAACGAGGTGTTCCTCGT CGACGTGCTCCGCGTGGGCGTGCGGGTGCGTGAGGCTGCCGGCAACGCGGCCATGGAGGCGGTGGTGCCGGCCGAGGCGGTGGCGAGAGCGGTGGGTAGGCTGATGGGCGACGACGACGCTGCGGCGAGGAGAGCGAGGGTGGACGAGCTGGGCGTCGCGGCGCGCACAGCCGTGTCCGACGGCGGGTCGTCGTGCGGTGACTGGGCGGAGCTGATAAATCAGCTAAAAGCGTTACAGCTTACATCGTCACGAGACAGACGCACTGATGCAGTGACAAGGGACTGACTCACATGCAGGCCAGTAGTAAACAAATACGGAATACTAAAAGATCAAGATTAATTTATACAAGTTCATAAAAACACAATCCAACATCCTGCCCTTTACCAGTGTATTACTTCCTCTGTTACAGAATAAGTTAATTTAGTACAGGGTGTAACACATC]
[-] EMBL C97433               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         aaCCACTGCGGGTGGAACTCGATAATTGGGATCCCCATCTCTGCCGGCGTGCCCACTCCGCGAACTTGGCCCATTTGCGCGCCGAANCAGTTCCTCAACGAGGTGTTCCTCGTCCGACGT CTCCGCNTGGGCGTGCGGGTGCGTGAGGCTGCCGGCAACNCGGCCATGGAGGCGGTGGTGCCGGCCGAGGCGGTGGCGAGAGCGGTGGGTAGGCTGATGGGCGACGACGACGCTGCGGCGAGGAGAGCGAGGGTGGACGAGCTGGGCGTCGCGGCGCGCACAGCCGTGTCCGACGGCGGGTCGTCGTGCGGTGACTGGGCGGAGCTGATAAATCAGCTAAAAGCGTTACAGCTTACATCGTCACGAGACAGACGCACTGATGCAGTGACAAGGGACTGACTCACATGCAGGCCAGTAGTAAACAAATACGGAATACTAAAAGATCA                                                                                                              ]




>consensus_343#0
CCTCCACGACGACACAGAGCCCAACTCAACCAGCTCACCAGACGAACCGAGCAAACGATC
GAACACCCACCATGCACACCACGAACGGCGCGCCTGCATGCTGCGACGCCAACGCCGACA
CGCCCCCGCTTCACCTCATCTTCGTGCCCTTCCTCTCGCGCAGCCACTTCGGCCCCGTCA
CAGCAATGGCAGCCGAAGCCGACGCCTGCCACCGCGGAGGGCGAACCGCCGCAACCATCG
TCACCACGCGCCACTTCGCAGCAATGGCCCCGGCATCCGTGCCGGTCCGTGTGGCGCAGT
TCGGGTTCCCGGGTGGGCACAACGACTTCTCCCTCCTCCCGGGCGAGGTCTCGGCCGCGG
CGTTCTTTGCCGCCGCGGAGGAAGCGTTGGCGCCGGCACTCGGGGCGGCGGTGCGTGGGC
TTCTCCGCGAAGGGGGCTCCACCGCCACCGTGACAGTCGTCTCGGACGCGGTGCTCCACT
GGGCGCCGCGTGTGGCGCGCGAGTGCGGCGTGCTGCACGTGACGTTCCACACCATCGGTG
CCTTCGCCGCTGCCGCCATGGTGGCGATCCATGGACACCTCCACTTACGTGAGGCCATGC
CAGACCCGTTCGGCGTCGACGAGGGCTTCCCGCTCCCCGTGAAGCTCCGCGGGGTGCAGG
TCAACGAGGAGGCCCTCGTTCACCTCCCCCTCTTCCGCGCCGCCGAGGCCGAGAGCTTCG
CCGTCGTCTTCAACAGCTTCGCGGCGCTCGAGGCCGACTTCGCCGAGTACTACCGTAGCC
TGGACGGGTCTCCCAAGAAGGTGTTCCTCGTCGGCCCAGCGCGCGCCGCCGTCTCCAAAC
TCAGCAAAGGCATCGCTGCCGACGGCGTCGACCGGGACCCTATCCTGCAATGGCTCGATG
GCCAACCGGCAGGGTCGGTGTTGTACGCGTGCTTCGGGAGCACATGTGGGATGGGCGCGA
GCCAGCTCACGGAACTCGCTGCTGGCCTGCGCGCGTCGGGCCGGCCATTCCTCTGGGTCA
TCCCGACGACGGCGGCGGAGGTAACAGAGCAGGAGGAGCGCGCGTCCAACCACGGCATGG
TGGTGGCCGGGCGGTGGGCGCCGCAAGCGGACATCCTGGCGCACCGCGCTGTGGGCGGCT
TCCTCAGCCACTGCGGGTGGAACTCGATACTGGATGCCATCTCTGCCGGCGTGCCACTCG
CGACTTGGCCATTGCGCGCCGAGCAGTTCCTCAACGAGGTGTTCCTCGTCGACGTGCTCC
GCGTGGGCGTGCGGGTGCGTGAGGCTGCCGGCAACGCGGCCATGGAGGCGGTGGTGCCGG
CCGAGGCGGTGGCGAGAGCGGTGGGTAGGCTGATGGGCGACGACGACGCTGCGGCGAGGA
GAGCGAGGGTGGACGAGCTGGGCGTCGCGGCGCGCACAGCCGTGTCCGACGGCGGGTCGT
CGTGCGGTGACTGGGCGGAGCTGATAAATCAGCTAAAAGCGTTACAGCTTACATCGTCAC
GAGACAGACGCACTGATGCAGTGACAAGGGACTGACTCACATGCAGGCCAGTAGTAAACA
AATACGGAATACTAAAAGATCAAGATTAATTTATACAAGTTCATAAAAACACAATCCAAC
ATCCTGCCCTTTACCAGTGTATTACTTCCTCTGTTACAGAATAAGTTAATTTAGTACAGG
GTGTAACACATC
clustalw multiple alignements is not computed in this case