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Oryza sativa
cluster # 3441 cluster # 3441       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3441#0 length = 1931 sequences # 2  

consensusID : consensus_3441#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1931
fasta sequence
                              [GTTTGCAGCCGGCGAAGCGCCGCCGCCATCGGAAAAAAAATGCCGCCCAAGCCAGAGCGGCTGCTGTTCCAGTACGTGAGCAAGCCGCGCAGGCCGGCGCGGGAGCCTGCGCCGGCGCCCGAGGTCTGCGGCGGCGGCGGCGAAGAGGTGGTCGCGTCCGACGCGGATGCCGACGCCGTGTACCGGATGGTCACGGCGGCGCCCACGCCGTCGGCGATGGAGTCCGCGCTGTCCGCGTCGGGCGTCGCGATCTCCGCGCCGCTCCTCGACCTCGTGCTGCGGAGGTTCCGGTTCGCGCACGGGGACCCGCTCCGCGCGCTGTCGCTCCTCTCCCTCGCGCTCGACCGCCACGGCGTCGCCCCGTCCCCCTTCGCGCTCGACACCGCGCTCTACGTGCTCGGCCGGGCGCGCCGGTTCGCGCACATGTGGGACCTGCTGCGATCCTCCCGCCGCCTCGTCCCGGACGCCGACACGCCGCGCACCGCCATGGTCGTCCTCGGCCGCGTCGCCAAGGTCTGCTCCGTCCGCGAGACCGTCGACTCCTTCCGCCGCCTCTCGCGGATGTTGAGGGGCCGCGGGGACGACCAGGAGGGCCAACTCTTCAACGCGCTGCTCCGCACGCTGTGCCAGGAGAAGAGCATGTCCGACGCGCGCAACGTCTACCACGCGCTCAAGTACGAGTTCAAGGTGAACCGCCAGACATTCAACATCCTGCTCTCCGGGTGGAAGTCAGCCGAGGACGCGGAGGCGTTCGTCGCCGAGATGCGGGAGCTCGGCGTGGAGCCAGACCTGGTGACTTACAACAGTTTGATTGATTGTCACTGCAAGAACCGGGGCGTGGAGAATGCCTACAAGCTGCTCGACGAAATGCGGGAGAAGGACATTTCTCCCGATGTGATCACTTACACGAGCTTGATCGGCGGGCTGGGGTTGATTGGCCAGCCAGACAAGGCAAAGCACTTGCTGAAGGAGATGCATGAGCTTGGATGCTACCCCGATGTACCTGCATACAACACGGCGATACGGAACTTTGTGATAGCAAAGAGGCTTGGTGATGCGTTTGCATTGATGGAAGAAATGGCCTCGAAGGGACTCATGCCAAATGCCACAACCTATAACCTTTTCTTCCGTTGCTATTATTGGGCATACGACATTGGCAGTGCTTGGCAGTTGTATGAGCGGATGCGTTCTGAAGGATGCTTCCCGAACACCCAGTCTTGCATGTTTATTGTGAGGTTATGTCATAGGCATGGGAGGGTTGCACAAGCACTAGAGCTGTGGAGTGATATGGTCAATAATGGGTTTGGGTCATTCACCTTGGTGTCTGATGTGTTGTTTGATCTGTTATGTGATGAAGGGAAGCTGGATGAGGCTGAGAGGTGCTTCCATCAAATGATTGAGTTAGGGCAGAAGCCGAGCAATGTTGCATTTAGAAGGATAAAGATACTCATGCAGCTTGCCAACCGTGAAGAATCTATTGCCAGATTAACTGCTCAAATGGCACAGTTTGGACGGTTGGCGCCTGAGGATTGCCGAAGAGTTGATCATACCTTGCAGAGCACACATCAAAGTAGTGATAGAACTGACACTGACACTATAGTGAAACACAGCAACACATTTGAATCACGACGATGATAAATTGGGGAAGATAACTTGGTTGGACAGGGAAATAACTGAAAAAGAGAGTTCTGTACTTCGATATGTTGTTCAAGGTATGAAGTTCTGCATGTGATCTATAGATGGCCAACCATATTATTTTCAATATCAATAGAATATGTTTCTGCAAGTTCTACTGTGGAAGACCATTCTAGCATTGCCTTCTGTGCTGAGAGAAATGCTATTCCAGCATCATTGTTATCTGCAAGCTGAATGCCTGGATGTAAAATCACAACTACTGTGTAGAGACACTTCAACATTTTTGTAACCTGTGG]

[+] EMBL AK107638             [GTTTGCAGCCGGCGAAGCGCCGCCGCCATCGGAAAAAAAATGCCGCCCAAGCCAGAGCGGCTGCTGTTCCAGTACGTGAGCAAGCCGCGCAGGCCGGCGCGGGAGCCTGCGCCGGCGCCCGAGGTCTGCGGCGGCGGCGGCGAAGAGGTGGTCGCGTCCGACGCGGATGCCGACGCCGTGTACCGGATGGTCACGGCGGCGCCCACGCCGTCGGCGATGGAGTCCGCGCTGTCCGCGTCGGGCGTCGCGATCTCCGCGCCGCTCCTCGACCTCGTGCTGCGGAGGTTCCGGTTCGCGCACGGGGACCCGCTCCGCGCGCTGTCGCTCCTCTCCCTCGCGCTCGACCGCCACGGCGTCGCCCCGTCCCCCTTCGCGCTCGACACCGCGCTCTACGTGCTCGGCCGGGCGCGCCGGTTCGCGCACATGTGGGACCTGCTGCGATCCTCCCGCCGCCTCGTCCCGGACGCCGACACGCCGCGCACCGCCATGGTCGTCCTCGGCCGCGTCGCCAAGGTCTGCTCCGTCCGCGAGACCGTCGACTCCTTCCGCCGCCTCTCGCGGATGTTGAGGGGCCGCGGGGACGACCAGGAGGGCCAACTCTTCAACGCGCTGCTCCGCACGCTGTGCCAGGAGAAGAGCATGTCCGACGCGCGCAACGTCTACCACGCGCTCAAGTACGAGTTCAAGGTGAACCGCCAGACATTCAACATCCTGCTCTCCGGGTGGAAGTCAGCCGAGGACGCGGAGGCGTTCGTCGCCGAGATGCGGGAGCTCGGCGTGGAGCCAGACCTGGTGACTTACAACAGTTTGATTGATTGTCACTGCAAGAACCGGGGCGTGGAGAATGCCTACAAGCTGCTCGACGAAATGCGGGAGAAGGACATTTCTCCCGATGTGATCACTTACACGAGCTTGATCGGCGGGCTGGGGTTGATTGGCCAGCCAGACAAGGCAAAGCACTTGCTGAAGGAGATGCATGAGCTTGGATGCTACCCCGATGTACCTGCATACAACACGGCGATACGGAACTTTGTGATAGCAAAGAGGCTTGGTGATGCGTTTGCATTGATGGAAGAAATGGCCTCGAAGGGACTCATGCCAAATGCCACAACCTATAACCTTTTCTTCCGTTGCTATTATTGGGCATACGACATTGGCAGTGCTTGGCAGTTGTATGAGCGGATGCGTTCTGAAGGATGCTTCCCGAACACCCAGTCTTGCATGTTTATTGTGAGGTTATGTCATAGGCATGGGAGGGTTGCACAAGCACTAGAGCTGTGGAGTGATATGGTCAATAATGGGTTTGGGTCATTCACCTTGGTGTCTGATGTGTTGTTTGATCTGTTATGTGATGAAGGGAAGCTGGATGAGGCTGAGAGGTGCTTCCATCAAATGATTGAGTTAGGGCAGAAGCCGAGCAATGTTGCATTTAGAAGGATAAAGATACTCATGCAGCTTGCCAACCGTGAAGAATCTATTGCCAGATTAACTGCTCAAATGGCACAGTTTGGACGGTTGGCGCCTGAGGATTGCCGAAGAGTTGATCATACCTTGCAGAGCACACATCAAAGTAGTGATAGAACTGACACTGACACTATAGTGAAACACAGCAACACATTTGAATCACGACGATGATAAATTGGGGAAGATAACTTGGTTGGACAGGGAAATAACTGAAAAAGAGAGTTCTGTACTTCGATATGTTGTTCAAGGTATGAAGTTCTGCATGTGATCTATAGATGGCCAACCATATTATTTTCAATATCAATAGAATATGTTTCTGCAAGTTCTACTGTGGAAGACCATTCTAGCATTGCCTTCTGTGCTGAGAGAAATGCTATTCCAGCATCATTGTTATCTGCAAGCTGAATGCCTGGATGTAAAATCACAACTACTGTGTAGAGACACTTCAACATTTTTGTAACCTGTGG]
[+] EMBL CA998889             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGTTATGTGATGAAGGGAAGCTGGATGAGGCTGAGAGGTGCTTCCATCAAATGATTGAGTTAGGGCAGAAGCCGAGCAATGTTGCATTTAGAAGGATAAAGATACTCATGCAGCTTGCCAACCGTGAAGAATCTATTGCCAGATTAACTGCTCAAATGGCACAGTTTGGACGGTTGGCGCCTGAGGATTGCCGAAGAGTTGATCATACCTTGCAGAGCACACATCACAGTAGTGATAGAACTGACACTGACACTATAGTGAAACACAGCAACACATTTGAATCACGACGATGATAAATTGGGGAAGATCACTTGGTTGGACAGGGAAATAACTGAAAAAGAGAGTTCTGTACTTCGATATGTTGTTCGAGGTATGAAGTTCTGCATGTGATCTATAGATGGCCAACC                                                                                                                                                                                      ]


>consensus_3441#0 GTTTGCAGCCGGCGAAGCGCCGCCGCCATCGGAAAAAAAATGCCGCCCAAGCCAGAGCGG CTGCTGTTCCAGTACGTGAGCAAGCCGCGCAGGCCGGCGCGGGAGCCTGCGCCGGCGCCC GAGGTCTGCGGCGGCGGCGGCGAAGAGGTGGTCGCGTCCGACGCGGATGCCGACGCCGTG TACCGGATGGTCACGGCGGCGCCCACGCCGTCGGCGATGGAGTCCGCGCTGTCCGCGTCG GGCGTCGCGATCTCCGCGCCGCTCCTCGACCTCGTGCTGCGGAGGTTCCGGTTCGCGCAC GGGGACCCGCTCCGCGCGCTGTCGCTCCTCTCCCTCGCGCTCGACCGCCACGGCGTCGCC CCGTCCCCCTTCGCGCTCGACACCGCGCTCTACGTGCTCGGCCGGGCGCGCCGGTTCGCG CACATGTGGGACCTGCTGCGATCCTCCCGCCGCCTCGTCCCGGACGCCGACACGCCGCGC ACCGCCATGGTCGTCCTCGGCCGCGTCGCCAAGGTCTGCTCCGTCCGCGAGACCGTCGAC TCCTTCCGCCGCCTCTCGCGGATGTTGAGGGGCCGCGGGGACGACCAGGAGGGCCAACTC TTCAACGCGCTGCTCCGCACGCTGTGCCAGGAGAAGAGCATGTCCGACGCGCGCAACGTC TACCACGCGCTCAAGTACGAGTTCAAGGTGAACCGCCAGACATTCAACATCCTGCTCTCC GGGTGGAAGTCAGCCGAGGACGCGGAGGCGTTCGTCGCCGAGATGCGGGAGCTCGGCGTG GAGCCAGACCTGGTGACTTACAACAGTTTGATTGATTGTCACTGCAAGAACCGGGGCGTG GAGAATGCCTACAAGCTGCTCGACGAAATGCGGGAGAAGGACATTTCTCCCGATGTGATC ACTTACACGAGCTTGATCGGCGGGCTGGGGTTGATTGGCCAGCCAGACAAGGCAAAGCAC TTGCTGAAGGAGATGCATGAGCTTGGATGCTACCCCGATGTACCTGCATACAACACGGCG ATACGGAACTTTGTGATAGCAAAGAGGCTTGGTGATGCGTTTGCATTGATGGAAGAAATG GCCTCGAAGGGACTCATGCCAAATGCCACAACCTATAACCTTTTCTTCCGTTGCTATTAT TGGGCATACGACATTGGCAGTGCTTGGCAGTTGTATGAGCGGATGCGTTCTGAAGGATGC TTCCCGAACACCCAGTCTTGCATGTTTATTGTGAGGTTATGTCATAGGCATGGGAGGGTT GCACAAGCACTAGAGCTGTGGAGTGATATGGTCAATAATGGGTTTGGGTCATTCACCTTG GTGTCTGATGTGTTGTTTGATCTGTTATGTGATGAAGGGAAGCTGGATGAGGCTGAGAGG TGCTTCCATCAAATGATTGAGTTAGGGCAGAAGCCGAGCAATGTTGCATTTAGAAGGATA AAGATACTCATGCAGCTTGCCAACCGTGAAGAATCTATTGCCAGATTAACTGCTCAAATG GCACAGTTTGGACGGTTGGCGCCTGAGGATTGCCGAAGAGTTGATCATACCTTGCAGAGC ACACATCAAAGTAGTGATAGAACTGACACTGACACTATAGTGAAACACAGCAACACATTT GAATCACGACGATGATAAATTGGGGAAGATAACTTGGTTGGACAGGGAAATAACTGAAAA AGAGAGTTCTGTACTTCGATATGTTGTTCAAGGTATGAAGTTCTGCATGTGATCTATAGA TGGCCAACCATATTATTTTCAATATCAATAGAATATGTTTCTGCAAGTTCTACTGTGGAA GACCATTCTAGCATTGCCTTCTGTGCTGAGAGAAATGCTATTCCAGCATCATTGTTATCT GCAAGCTGAATGCCTGGATGTAAAATCACAACTACTGTGTAGAGACACTTCAACATTTTT GTAACCTGTGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)