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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3445 cluster # 3445       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3445#0 length = 755 sequences # 2  

consensusID : consensus_3445#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 755
fasta sequence
                              [CATGTTTATCAGTGATTTATTTTATCTAATTAGCATACCAATACAAAGGAAAAGAAGTGCACAGACTAAAGAAAACCTCACTTTTCTCAAAATAGAAAAAATAAACCACAAAATCTTCCTGGGGCTAAGTGAGATCTTACAACAGTGTATGGGAGTTTTCTATTTGTATAGCTCTGAAACTTCACGAGCAAACTTGTCCATGAATTGGCATTTCTTGTCAAAACCCCAGCCTGGATTGTTCTTAAGAGACAGTAGAGTTTTATCAGTAAACCGCTTTACTGAAGAGGGTATATTTCCTGGGAGAGTGTTGGCCACTCTTTGCAGCTCTTCTTCTTGTTGCTTTGCAGTTACAACATCAGGGCCACTGTACATATCTATCAGCTCCTTCATATGGGGTGCCCTTGCCATTACATCTTTCACAGCTTCCTCCCATTCCTCCTGGTTCTGGATGCCCTCATACGCAACTATGAATGGCTTCACCTTCTGTAGCATATCCTCCAATGACATAGGTGGCTTCTCTTCGATATCTGGATTATTGAAATTCACATGATACTCTGGCTCAAACTCGATCATGTTATTGGTGTGACAAGCCTCCAGATATGCATCCTGCTTCGGGTCTGGCAGCGCGTTATCTGCGGCCTCATCAAACGCTTCGTTAAAAATCTTCATCTTGTCCTCCCCGAGCCGCTTCTGGAGTCTGTCGCCATCCGCATTGTCCCCCAAGTAGATCCCATGCTTCTCCTCCATATCAACAG]

[-] EMBL CA999004             [CATGTTTATCAGTGATTTATTTTATCTAATTAGCATACCAATACAAAGGAAAAGAAGTGCACAGACTAAAGAAAACCTCACTTTTCTCAAAATAGAAAAAATAAACCACAAAATCTTCCTGGGGCTAAGTGAGATCTTACAACAGTGTATGGGAGTTTTCTATTTGTATAGCTCTGAAACTTCACGAGCAAACTTGTCCATGAATTGGCATTTCTTGTCAAAACCCCAGCCTGGATTGTTCTTAAGAGACAGTAGAGTTTTATCAGTAAACCGCTTTACTGAAGAGGGTATATTTCCTGGGAGAGTGTTGGCCACTCTTTGCAGCTCTTCTTCTTGTTGCTTTGCAGTTACAACATCAGGGCCACTGTACATATCTATCAGCTCCTTCATATGGGGTGCCCTTGCCATTACATCTTTCACAGCTTCCTCCCATTCCTCCTGGTTCTGGATGCCCTCATACGCAACTATGAATGGCTTCACCTTCTGTAGCATATCCTCCAATGACATAGGTGGCTTCTCTTCGATATCTGGATTATTGAAATTCACATGATACTCTGGCTCAAACTCGATCATGTTATTGGTGTGACAAGCCTCCAGATATGCATCCTGCTTCGGGTCTGGCAGCGCGTTATCTGCGGCCTCATCAAACGCTTCGTTAAAAATCTT                                                                                         ]
[+] EMBL CB678706             [                   aTTTATCTAATTAGCACCCTTATACAAAGGAAAAGAAGTGCACAGACTAAAGAAAACCTCACTTTTCTCAAAATAGAAAAAATAAACCACAAAATCTTCCTGGGGCTAAGTGAGATCTTACAACAGTGTATGGGAGTTTTCTATTTGTATAGCTCTGAAACTTCACGAGCAAACTTGTCCATGAATTGGCATTTCTTGTCAAAACCCCAGCCTGGATTGTTCTTAAGAGACAGTAGAGTTTTATCAGTAAACCGCTTTACTGAAGAGGGTATATTTCCTGGGAGAGTGTTGGCCACTCTTTGCAGCTCTTCTTCTTGTTGCTTTGCAGTTACAACATCAGGGCCACTGTACATATCTATCAGCTCCTTCATATGGGGTGCCCTTGCCATTACATCTTTCACAGCTTCCTCCCATTCCTCCTGGTTCTGGATGCCCTCATACGCAACTATGAATGGCTTCACCTTCTGTAGCATATCCTCCAATGACATAGGTGGCTTCTCTTCGATATCTGGATTATTGAAATTCACATGATACTCTGGCTCAAACTCGATCATGTTATTGGTGTGACAAGCCTCCAGATATGCATCCTGCTTCGGGTCTGGCAGCGCGTTATCTGCGGCCTCATCAAACGCTTCGTTAAAAATCTTCATCTTGTCCTCCCCGAGCCGCTTCTGGAGTCTGTCGCCATCCGCATTGTCCCCCAAGTAGATCCCATGCTTCTCCTCCATATCAACAG]


>consensus_3445#0 CATGTTTATCAGTGATTTATTTTATCTAATTAGCATACCAATACAAAGGAAAAGAAGTGC ACAGACTAAAGAAAACCTCACTTTTCTCAAAATAGAAAAAATAAACCACAAAATCTTCCT GGGGCTAAGTGAGATCTTACAACAGTGTATGGGAGTTTTCTATTTGTATAGCTCTGAAAC TTCACGAGCAAACTTGTCCATGAATTGGCATTTCTTGTCAAAACCCCAGCCTGGATTGTT CTTAAGAGACAGTAGAGTTTTATCAGTAAACCGCTTTACTGAAGAGGGTATATTTCCTGG GAGAGTGTTGGCCACTCTTTGCAGCTCTTCTTCTTGTTGCTTTGCAGTTACAACATCAGG GCCACTGTACATATCTATCAGCTCCTTCATATGGGGTGCCCTTGCCATTACATCTTTCAC AGCTTCCTCCCATTCCTCCTGGTTCTGGATGCCCTCATACGCAACTATGAATGGCTTCAC CTTCTGTAGCATATCCTCCAATGACATAGGTGGCTTCTCTTCGATATCTGGATTATTGAA ATTCACATGATACTCTGGCTCAAACTCGATCATGTTATTGGTGTGACAAGCCTCCAGATA TGCATCCTGCTTCGGGTCTGGCAGCGCGTTATCTGCGGCCTCATCAAACGCTTCGTTAAA AATCTTCATCTTGTCCTCCCCGAGCCGCTTCTGGAGTCTGTCGCCATCCGCATTGTCCCC CAAGTAGATCCCATGCTTCTCCTCCATATCAACAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)