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Oryza sativa
cluster # 3452 cluster # 3452       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3452#0 length = 1524 sequences # 2  

consensusID : consensus_3452#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1524
fasta sequence
                              [CGGCGCCACCACTGGGCGCCCGTGATCCACATGCAGCAGTTCTTCCCCGTCGGCGACGTCGCGTACGCGCTCCAGCAGGCCGGGTKGCGCCGCCGCGCGCCGCCGCACCACCAGCAGCAGGGCCCCGGCGCCTCGCCGTCCCCGCCGCCCCYTCCCCCGCGCGGCCGCCCCTCGTTCTCGGCGTCCCACTCGCACCATCGCCACGGTGGTCACCATCATCGCTCCGATTCGGTGCGCGGCGGCGGCACTGGTGCGACGGCTGGATCCGATAAAGATGGACGTGAAGTTCATAACAAGGAAGAGAAAGGAATGAAGGAAGCAGAGAATGTGGTTGAAGCTAAAAGCTCACAGTTGGAGTCTCTTGTTTCTCATGAAGGTGAAAAAACTCCTAGGCCGCAAGCTGTTGCTGAAGGAAGCAGTAAAGTGGTTCCAACTCCTGTGGAGTATACGGTCAATGACATTATTGATGGCAAGACGGTTAATGCTGTTGAAGGGCTTAAGGTTTATGAAGGGTTGGTAAATGAGAATGAGAAAAACAAGATTCTCTCTTTACTTAATGAAACAAAAGCTTCTTTTCGTCGAGGAGGGCTTGAAGCTGGGCAGACTGTAATAATTGGAAAAAGACCAATGAAGGGTCATGGGAGGGAAATTATTCAGCTGGGCATTCCTATCGTTGAAGGCCCTCCTGAAGATGACTATCCAAGAGAGACAAAAGTGGAGGCTGTTCCTGGATTGCTGCATGATCTGTTTGACCGCTTGTGTCAGAAGGAAATTATACCAACAAAACCAGATTATTGTGTTATTGATTACTACAATGAGGGGGATTATTCTCACCCTCACCAATCCCCTCCTTGGTATGGTAGACCCTTTTGTACATTCTGCCTGACAGATTGTGACATGGTGTTCGGCCGAGTTATTTCAGGAGAACGAGGTGATCATAGAGGTCCTCTGAAGCTCCTTCTCTCGACAGGGTCTCTTCTGGTGTTGCATGGGAAGAGTGCTGATGTTGCTAAGCGAGCTATTCCTGCTGCATGTAAGCAGCGGATCCTACTAAGCTTCGGGAAGTCTTTATCGAGAAAACAAGTACCATCTGAAAGTGTTTCACGGTTTACTACCCCGTTGACACCACCTCCTATGCCCTGGGGTCCTCCAAGGCCGGCTAACATGGCGCGTCATTCTTCAAGCCCTAAACACTTTGGATATGCCCCAAACAGTGGCGTACTTCCAGCGCCGGCCATTGGAGCGCATCACATTCCTCCATCAGATGGAATGCAGCCACTCTTTGTAGCACCTGCTCCAGTTGCTGCTGCAGCCATGCCTTTCCCATCACCTGTTCCTTTGCCAAACTTAACCAACAGCTTGGATGGCAGAAGCTGCTCCAAGGTCTGCTCCACAACGACTCCCAGTTCCTGGCACGGGGGTCTTCCTTCCTCCTGGATCGGGTCACGCACTGCCTCATCAGATGATGACAGCTTCTCAGTCTCCTGCCGAGCCAATCTCTTCAACAGATTCATCTGCTTACGT]

[+] EMBL AY224467             [CGGCGCCACCACTGGGCGCCCGTGATCCACATGCAGCAGTTCTTCCCCGTCGGCGACGTCGCGTACGCGCTCCAGCAGGCCGGGTKGCGCCGCCGCGCGCCGCCGCACCACCAGCAGCAGGGCCCCGGCGCCTCGCCGTCCCCGCCGCCCCYTCCCCCGCGCGGCCGCCCCTCGTTCTCGGCGTCCCACTCGCACCATCGCCACGGTGGTCACCATCATCGCTCCGATTCGGTGCGCGGCGGCGGCACTGGTGCGACGGCTGGATCCGATAAAGATGGACGTGAAGTTCATAACAAGGAAGAGAAAGGAATGAAGGAAGCAGAGAATGTGGTTGAAGCTAAAAGCTCACAGTTGGAGTCTCTTGTTTCTCATGAAGGTGAAAAAACTCCTAGGCCGCAAGCTGTTGCTGAAGGAAGCAGTAAAGTGGTTCCAACTCCTGTGGAGTATACGGTCAATGACATTATTGATGGCAAGACGGTTAATGCTGTTGAAGGGCTTAAGGTTTATGAAGGGTTGGTAAATGAGAATGAGAAAAACAAGATTCTCTCTTTACTTAATGAAACAAAAGCTTCTTTTCGTCGAGGAGGGCTTGAAGCTGGGCAGACTGTAATAATTGGAAAAAGACCAATGAAGGGTCATGGGAGGGAAATTATTCAGCTGGGCATTCCTATCGTTGAAGGCCCTCCTGAAGATGACTATCCAAGAGAGACAAAAGTGGAGGCTGTTCCTGGATTGCTGCATGATCTGTTTGACCGCTTGTGTCAGAAGGAAATTATACCAACAAAACCAGATTATTGTGTTATTGATTACTACAATGAGGGGGATTATTCTCACCCTCACCAATCCCCTCCTTGGTATGGTAGACCCTTTTGTACATTCTGCCTGACAGATTGTGACATGGTGTTCGGCCGAGTTATTTCAGGAGAACGAGGTGATCATAGAGGTCCTCTGAAGCTCCTTCTCTCGACAGGGTCTCTTCTGGTGTTGCATGGGAAGAGTGCTGATGTTGCTAAGCGAGCTATTCCTGCTGCATGTAAGCAGCGGATCCTACTAAGCTTCGGGAAGTCTTTATCGAGAAAACAAGTACCATCTGAAAGTGTTTCACGGTTTACTACCCCGTTGACACCACCTCCTATGCCCTGGGGTCCTCCAAGGCCGGCTAACATGGCGCGTCATTCTTCAAGCCCTAAACACTTTGGATATGCCCCAAACAGTGGCGTACTTCCAGCGCCGGCCATTGGAGCGCATCACATTCCTCCATCAGATGGAATGCAGCCACTCTTTGTAGCACCTGCTCCAGTTGCTGCTGCAGCCATGCCTTTCCCATCACCTGTTCCTTTGCCAAACTTAACCAACAGCTTGGATGGCAGAAGCTGCTCCAAGGTCTGCTCCACAACGACTCCCAGTTCCTGGCACGGGGGTCTTCCTTCCTCCTGGATCGGGTCACGCACTGCCTC                                                                   ]
[+] EMBL CA999578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGCGCCGGCCATTGGAGCGCATCACATTCCTCCATCAGATGGAATGCAGCCACTCTTTGTAGCACCTGCTCCAGTTGCTGCTGCAGCCATGCCTTTCCCATCACCTGTTCCTTTGCCAAACTCAA CAACAGCTTGGATGGCAGAAGCTGCTCCAAGGTCTGCTCCACAACGACTCCCAGTTCCTGGCACGGGGGTCTTCCTTCCTCCTGGATCGGGTCACGCACTGCCTCATCAGATGATGACAGCTTCTCAGTCTCCTGCCGAGCCAATCTCTTCAACAGATTCATCTGCTTACGT]


>consensus_3452#0 CGGCGCCACCACTGGGCGCCCGTGATCCACATGCAGCAGTTCTTCCCCGTCGGCGACGTC GCGTACGCGCTCCAGCAGGCCGGGTKGCGCCGCCGCGCGCCGCCGCACCACCAGCAGCAG GGCCCCGGCGCCTCGCCGTCCCCGCCGCCCCYTCCCCCGCGCGGCCGCCCCTCGTTCTCG GCGTCCCACTCGCACCATCGCCACGGTGGTCACCATCATCGCTCCGATTCGGTGCGCGGC GGCGGCACTGGTGCGACGGCTGGATCCGATAAAGATGGACGTGAAGTTCATAACAAGGAA GAGAAAGGAATGAAGGAAGCAGAGAATGTGGTTGAAGCTAAAAGCTCACAGTTGGAGTCT CTTGTTTCTCATGAAGGTGAAAAAACTCCTAGGCCGCAAGCTGTTGCTGAAGGAAGCAGT AAAGTGGTTCCAACTCCTGTGGAGTATACGGTCAATGACATTATTGATGGCAAGACGGTT AATGCTGTTGAAGGGCTTAAGGTTTATGAAGGGTTGGTAAATGAGAATGAGAAAAACAAG ATTCTCTCTTTACTTAATGAAACAAAAGCTTCTTTTCGTCGAGGAGGGCTTGAAGCTGGG CAGACTGTAATAATTGGAAAAAGACCAATGAAGGGTCATGGGAGGGAAATTATTCAGCTG GGCATTCCTATCGTTGAAGGCCCTCCTGAAGATGACTATCCAAGAGAGACAAAAGTGGAG GCTGTTCCTGGATTGCTGCATGATCTGTTTGACCGCTTGTGTCAGAAGGAAATTATACCA ACAAAACCAGATTATTGTGTTATTGATTACTACAATGAGGGGGATTATTCTCACCCTCAC CAATCCCCTCCTTGGTATGGTAGACCCTTTTGTACATTCTGCCTGACAGATTGTGACATG GTGTTCGGCCGAGTTATTTCAGGAGAACGAGGTGATCATAGAGGTCCTCTGAAGCTCCTT CTCTCGACAGGGTCTCTTCTGGTGTTGCATGGGAAGAGTGCTGATGTTGCTAAGCGAGCT ATTCCTGCTGCATGTAAGCAGCGGATCCTACTAAGCTTCGGGAAGTCTTTATCGAGAAAA CAAGTACCATCTGAAAGTGTTTCACGGTTTACTACCCCGTTGACACCACCTCCTATGCCC TGGGGTCCTCCAAGGCCGGCTAACATGGCGCGTCATTCTTCAAGCCCTAAACACTTTGGA TATGCCCCAAACAGTGGCGTACTTCCAGCGCCGGCCATTGGAGCGCATCACATTCCTCCA TCAGATGGAATGCAGCCACTCTTTGTAGCACCTGCTCCAGTTGCTGCTGCAGCCATGCCT TTCCCATCACCTGTTCCTTTGCCAAACTTAACCAACAGCTTGGATGGCAGAAGCTGCTCC AAGGTCTGCTCCACAACGACTCCCAGTTCCTGGCACGGGGGTCTTCCTTCCTCCTGGATC GGGTCACGCACTGCCTCATCAGATGATGACAGCTTCTCAGTCTCCTGCCGAGCCAATCTC TTCAACAGATTCATCTGCTTACGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)