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Oryza sativa
cluster # 3457 cluster # 3457       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3457#0 length = 1045 sequences # 2  

consensusID : consensus_3457#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1045
fasta sequence
                              [TTCCCGGACGCCTCCCCACCTCACGCTCCTCCTCCTTCTAATAACCCCAGCGATGGGTGGGAGCCGAGCCCTTCCCCTCTCCTCCCTCCTCGCCGCCGCCACCAAATCCCCCCTCCTCCACCACCGCCCCCTCCCGCTCCGCCTCGCCGCCTCCATGTCGTCGTCGTCCCCTTCCCCCTCTCCCGCTGCCCCGGCCTCCGCCTCCGCCATCGACTTCCTCACGCTCTGCTACCGCCTCAAGACGACGAAGAGGGCCGGGTGGGTGAGGCGCGGGGTGCAGGGGCCGGAGTCCGTCGCCGACCACATGTACCGGATGGGCGTCATGGCGCTCGTCGCCGCCGACCTGCCCAGCGGCGTGAACCGCGACAGGTGTGTCAAGATGGCGATCGTGCACGACATAGCCGAAGCTATTGTTGGTGATATCACCCCTTCAGATGGCGTGCCGAAGGAAGAAAAGAGCCGCAGAGAGCAAGAAGCATTGGACCATATGTGCAGTTTGCTCGGTGGTGGTCCGAGAGCTGAAGAAATCCGTGAACTTTGGATGGAATATGAGCAGAATGCCACTTTGGAAGCAAAGGTTGTGAAAGATTTTGACAAGGTTGAGATGATTCTTCAAGCATTGGAGTATGAAAAGGAGCAAGGGCTGGACCTAGAAGAGTTTTTCCAGTCAACAGCAGGGAAATTTCAGACAGACGTTGGAAAAGCATGGGCAGCAGAGGTAGCATCAAGAAGAAAGTGAAATTAACCAATCACATGACATTTGACAGGCCCCCTTTGGTGTTTCTTTTCCAAAGATAACCTCAAGGTTTCTGTTAAACTTCACCCTTAAAGACTTTGTTAGCTCTGGGCCATTTGGACCCGATGCTTAGAGCTTGAGAATTGAGATCAGCTGGTTTCAGAGGCTAGTTGTTTTTTTTTGCTTAAGCTGGGTTCTTGTAGCTCACCTGCCTGCCTCCGGGATGCTGATTCACTAGGAAAGCCTTATTGGCCGTCCTCGTTGTTGTGATGTAAAATCAACTAATTCAGTTTTTATGGCAATCGAGTT]

[+] EMBL AK058557             [TTCCCGGACGCCTCCCCACCTCACGCTCCTCCTCCTTCTAATAACCCCAGCGATGGGTGGGAGCCGAGCCCTTCCCCTCTCCTCCCTCCTCGCCGCCGCCACCAAATCCCCCCTCCTCCACCACCGCCCCCTCCCGCTCCGCCTCGCCGCCTCCATGTCGTCGTCGTCCCCTTCCCCCTCTCCCGCTGCCCCGGCCTCCGCCTCCGCCATCGACTTCCTCACGCTCTGCTACCGCCTCAAGACGACGAAGAGGGCCGGGTGGGTGAGGCGCGGGGTGCAGGGGCCGGAGTCCGTCGCCGACCACATGTACCGGATGGGCGTCATGGCGCTCGTCGCCGCCGACCTGCCCAGCGGCGTGAACCGCGACAGGTGTGTCAAGATGGCGATCGTGCACGACATAGCCGAAGCTATTGTTGGTGATATCACCCCTTCAGATGGCGTGCCGAAGGAAGAAAAGAGCCGCAGAGAGCAAGAAGCATTGGACCATATGTGCAGTTTGCTCGGTGGTGGTCCGAGAGCTGAAGAAATCCGTGAACTTTGGATGGAATATGAGCAGAATGCCACTTTGGAAGCAAAGGTTGTGAAAGATTTTGACAAGGTTGAGATGATTCTTCAAGCATTGGAGTATGAAAAGGAGCAAGGGCTGGACCTAGAAGAGTTTTTCCAGTCAACAGCAGGGAAATTTCAGACAGACGTTGGAAAAGCATGGGCAGCAGAGGTAGCATCAAGAAGAAAGTGAAATTAACCAATCACATGACATTTGACAGGCCCCCTTTGGTGTTTCTTTTCCAAAGATAACCTCAAGGTTTCTGTTAAACTTCACCCTTAAAGACTTTGTTAGCTCTGGGCCATTTGGACCCGATGCTTAGAGCTTGAGAATTGAGATCAGCTGGTTTCAGAGGCTAGTTGTTTTTTTTTGCTTAAGCTGGGTTCTTGTAGCTCACCTGCCTGCCTCCGGGATGCTGATTCACTAGGAAAGCCTTATTGGCCGTCCTCGTTGTTGTGATGTAAAATCAACTAATTCAGTTTTTATGGCAATCGAGTT]
[+] EMBL CA999787             [                                                                                                                                                                                                                                                                                                                     CCGGATGGGCGTCATGGCGCTCGTCGCCGCCGACCTGCCCAGCGGCGTGAACCGCGACAGGTGTGTCAAGATGGCGATCGTGCACGACATAGCCGAAGCTATTGTTGGTGATATCACCCCTTCAGATGGCGTGCCGAAGGAAGAAAAGAGCCGCAGAGAGCAAGAAGCATTGGACCATATGTGCAGTTTGCTCGGTGGTGGTCCGAGAGCTGAAGAAATCCGTGAACTTTGGATGGAATATGAGCAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_3457#0 TTCCCGGACGCCTCCCCACCTCACGCTCCTCCTCCTTCTAATAACCCCAGCGATGGGTGG GAGCCGAGCCCTTCCCCTCTCCTCCCTCCTCGCCGCCGCCACCAAATCCCCCCTCCTCCA CCACCGCCCCCTCCCGCTCCGCCTCGCCGCCTCCATGTCGTCGTCGTCCCCTTCCCCCTC TCCCGCTGCCCCGGCCTCCGCCTCCGCCATCGACTTCCTCACGCTCTGCTACCGCCTCAA GACGACGAAGAGGGCCGGGTGGGTGAGGCGCGGGGTGCAGGGGCCGGAGTCCGTCGCCGA CCACATGTACCGGATGGGCGTCATGGCGCTCGTCGCCGCCGACCTGCCCAGCGGCGTGAA CCGCGACAGGTGTGTCAAGATGGCGATCGTGCACGACATAGCCGAAGCTATTGTTGGTGA TATCACCCCTTCAGATGGCGTGCCGAAGGAAGAAAAGAGCCGCAGAGAGCAAGAAGCATT GGACCATATGTGCAGTTTGCTCGGTGGTGGTCCGAGAGCTGAAGAAATCCGTGAACTTTG GATGGAATATGAGCAGAATGCCACTTTGGAAGCAAAGGTTGTGAAAGATTTTGACAAGGT TGAGATGATTCTTCAAGCATTGGAGTATGAAAAGGAGCAAGGGCTGGACCTAGAAGAGTT TTTCCAGTCAACAGCAGGGAAATTTCAGACAGACGTTGGAAAAGCATGGGCAGCAGAGGT AGCATCAAGAAGAAAGTGAAATTAACCAATCACATGACATTTGACAGGCCCCCTTTGGTG TTTCTTTTCCAAAGATAACCTCAAGGTTTCTGTTAAACTTCACCCTTAAAGACTTTGTTA GCTCTGGGCCATTTGGACCCGATGCTTAGAGCTTGAGAATTGAGATCAGCTGGTTTCAGA GGCTAGTTGTTTTTTTTTGCTTAAGCTGGGTTCTTGTAGCTCACCTGCCTGCCTCCGGGA TGCTGATTCACTAGGAAAGCCTTATTGGCCGTCCTCGTTGTTGTGATGTAAAATCAACTA ATTCAGTTTTTATGGCAATCGAGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)