These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3494#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2000 fasta sequence [CTCCTTTCCTTCCATTCTCGTCGTCGTCTTCACTCCCAATCTCCTCCTCCGCCTCCGCCGCTGCCGCGTCAGCCGCGCCCCGCCGCCGTGGCTCCTTCCGTGCGCGGTGCCAAGTTAAGTCGCCGCCTGCTTCTGCCTGGCCTTCCCTTCCCCGCCCCGAGCGGATTCCGGCGCCGCTGCTGTCGCTTCCCGAAGAAGACGCGTAAGCCCTAGTTGGTGCTAGTTTGCTGCTGCTTGCGAGAAGGAGAGAGTGGAGTGAGTCAGTAAGATATCTGAGGTGGAGGGGGAAACGAGGATTTTATTTATTTTTATTTTTGGTTCGCTCGTGATCTGCGTGCTCGTTTCTTGGAGCTGAGTTGCATCGTCGGATGGAGCGAAAGCTACCTGCTGGCCCATACTGACCTGAGATAGGAGGCTTCTTGTGAGGCAACCACAGAGGTGTTTGGCTTGGTCAAAGAAGAGCTCATCTCCCTTGTTTTTGTCTTTCTTCATGGGGGTGCTTGATGACTTGCTGTGAGGCCTGAGCCGTCCTGTTTGTTGTTCTTGGATAGAATATAACAGTATTCCAGAAGCAGTGTTTTTGGTGCTAATATTGGAAGAGAAACAGTATTTTGGGGCTTGGCTATGTCAGTTTCAGAGAAGGTGGTACCACCATCTTCTGTGTCTTCGTCGGATTTGGATCCGCTGTTGAAGGATCTTACAGAGAAGAAGTTAAGCTTTAGGAGAAACGTGGTGTCTTTGGCGGCTGAGCTCAAGGATGTGAGGAACAAACTTGCTTCACAGGAGCAGTTGTTTGTTCGGGAATCCCAAACCAGAAAGTTTGCTGAGACAAAGGCGAGGAGCATGGAGGAAGAAATCAGTAAGCTGCAGAAATGCTTGAATGATAAAGATGAGCAACTGCGTTCGTCGACAGGTTGCACAGAACAGTACTTCCACGAGTTGGACGATCTTAGATCGAAACTGTCAGTCACCCAAGCTACAGCAGAAGCAAGTGCTGCATCAGCCAAATCAGCTCAGTCACAATGCTTGTCATTATTAAAAGAGCTGAATGAGAAGGACAGCTCGCTAAAAGAACACGAGCGTCGAGTCAACAAGCTAGGTGAGCAGCTGGATCATCTCCAGAAGGATCTTGAATCAAGGGAATACTCACAGAGGCAACTCAAAGATGAAGTTTTGAGGATCGAAACAGATATCATGGATGCAGTTGCCAAAGTTGGGTCTAACAAAGATAATGAGCTTCTAAAGATCTTATCTGATGTATCACCAAGGAACATTGATAATCTCAATAAACTTCTGAACGCTAAGGATGCAGAGATTGCCAGATTGAGAGATGAAATTAGGATATTATCTGCTCACTGGACGAACAAAACAAAGGAACTAGAGTCACAGTTGGAGAAACAAAAGAGAACCGACCAGGAACTGAAAAAGAGAATTCTAAAGCTTGAATTCTGCCTTCAGGAATCACGGTCCCAGATAAGAAAACTTCAGAGAGCTGGTGAGAAAAGAGACAAGCAACTGAAGGAGCTGAAGGATCAGGTGGGCATGAAGCAACCCAGTGTCCCATACCGTGATGACAAGCACAACTTCTGGGAGAACCAGAGCTTCAAGTTCATCGCCTCCATGTCAATGCTCGCACTAGTGATGCTCACAAAGCGATGAAACAGCATCCTGTGTAAAGAATGCTACTTAGTAGTATATTCCAGTGTTAGGTGAGCACCTTGCTCATAGTCTATAGTTCAGGAAGCCAGAGATGTAGTCAAGTAGGTCATTGCTGCATGATCAGTCGTCAGATGATGCCCCAACTGAATTTGCCGACATCCAAGATTAGTCTGTAGTATTGTAGTACTGTAGTGCAGTTGCTGCTAGCTTATGTAAGCTCATAATTAAGCAATATTGTAGTTACAGATCTACCTTAATTTATGTCTGGCCGCGTTGCGGGTNTGNTAATGCTGGCATGGTTCGCTTGGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGC] [+] EMBL AK105117 [CTCCTTTCCTTCCATTCTCGTCGTCGTCTTCACTCCCAATCTCCTCCTCCGCCTCCGCCGCTGCCGCGTCAGCCGCGCCCCGCCGCCGTGGCTCCTTCCGTGCGCGGTGCCAAGTTAAGTCGCCGCCTGCTTCTGCCTGGCCTTCCCTTCCCCGCCCCGAGCGGATTCCGGCGCCGCTGCTGTCGCTTCCCGAAGAAGACGCGTAAGCCCTAGTTGGTGCTAGTTTGCTGCTGCTTGCGAGAAGGAGAGAGTGGAGTGAGTCAGTAAGATATCTGAGGTGGAGGGGGAAACGAGGATTTTATTTATTTTTATTTTTGGTTCGCTCGTGATCTGCGTGCTCGTTTCTTGGAGCTGAGTTGCATCGTCGGATGGAGCGAAAGCTACCTGCTGGCCCATACTGACCTGAGATAGGAGGCTTCTTGTGAGGCAACCACAGAGGTGTTTGGCTTGGTCAAAGAAGAGCTCATCTCCCTTGTTTTTGTCTTTCTTCATGGGGGTGCTTGATGACTTGCTGTGAGGCCTGAGCCGTCCTGTTTGTTGTTCTTGGATAGAATATAACAGTATTCCAGAAGCAGTGTTTTTGGTGCTAATATTGGAAGAGAAACAGTATTTTGGGGCTTGGCTATGTCAGTTTCAGAGAAGGTGGTACCACCATCTTCTGTGTCTTCGTCGGATTTGGATCCGCTGTTGAAGGATCTTACAGAGAAGAAGTTAAGCTTTAGGAGAAACGTGGTGTCTTTGGCGGCTGAGCTCAAGGATGTGAGGAACAAACTTGCTTCACAGGAGCAGTTGTTTGTTCGGGAATCCCAAACCAGAAAGTTTGCTGAGACAAAGGCGAGGAGCATGGAGGAAGAAATCAGTAAGCTGCAGAAATGCTTGAATGATAAAGATGAGCAACTGCGTTCGTCGACAGGTTGCACAGAACAGTACTTCCACGAGTTGGACGATCTTAGATCGAAACTGTCAGTCACCCAAGCTACAGCAGAAGCAAGTGCTGCATCAGCCAAATCAGCTCAGTCACAATGCTTGTCATTATTAAAAGAGCTGAATGAGAAGGACAGCTCGCTAAAAGAACACGAGCGTCGAGTCAACAAGCTAGGTGAGCAGCTGGATCATCTCCAGAAGGATCTTGAATCAAGGGAATACTCACAGAGGCAACTCAAAGATGAAGTTTTGAGGATCGAAACAGATATCATGGATGCAGTTGCCAAAGTTGGGTCTAACAAAGATAATGAGCTTCTAAAGATCTTATCTGATGTATCACCAAGGAACATTGATAATCTCAATAAACTTCTGAACGCTAAGGATGCAGAGATTGCCAGATTGAGAGATGAAATTAGGATATTATCTGCTCACTGGACGAACAAAACAAAGGAACTAGAGTCACAGTTGGAGAAACAAAAGAGAACCGACCAGGAACTGAAAAAGAGAATTCTAAAGCTTGAATTCTGCCTTCAGGAATCACGGTCCCAGATAAGAAAACTTCAGAGAGCTGGTGAGAAAAGAGACAAGCAACTGAAGGAGCTGAAGGATCAGGTGGGCATGAAGCAACCCAGTGTCCCATACCGTGATGACAAGCACAACTTCTGGGAGAACCAGAGCTTCAAGTTCATCGCCTCCATGTCAATGCTCGCACTAGTGATGCTCACAAAGCGATGAAACAGCATCCTGTGTAAAGAATGCTACTTAGTAGTATATTCCAGTGTTAGGTGAGCACCTTGCTCATAGTCTATAGTTCAGGAAGCCAGAGATGTAGTCAAGTAGGTCATTGCTGCATGATCAGTCGTCAGATGATGCCCCAACTGAATTTGCCGACATCCAAGATTAGTCTGTAGTATTGTAGTACTGTAGTGCAGTTGCTGCTAGCTTATGTAAGCTCATAATTAAGCAATATTGTAGTTACAGATCTACCTTAATTTATGTCTGGCCGCGTTG ] [+] EMBL CB096724 [ AGAGGCAACTCAAAGATGAAGTTTTGAGGATCGAAACAGATATCATGGATGCGGTTGCCAAAGTTGGGTCTAACAAAGATAATGAGCTTCTAAAGATCTTATCTGATGTATCACCAAGGAACATTGATAATCTCAATAAACTTCTGAACGCTAAGGATGCAGAGATTGCCAGATTGAGAGATGAAATTAGGATATTATCTGCTCACTGGACGAACAAAACAAAGGAACTAGAGTCACAGTTGGAGAAACAAAAGAGAACCGACCAGGAACTGAAAAAGAGAATTCTAAAGCTTGAATTCTGCCTTCAGGAATCACGGTCCCAGATAAGAAAACTTCAGAGGGCTGGTGAGAAAAGAGACAAGCAACTGAAGGAGCTGAAGGATCAGGTGGGCATGAAGCAACCCAGTGTCCCATACCGTGATGACAAGCACAACTTCTGGGAGAACCAGAGCTTCAAGTTCATCGCCTCCATGTCAATGCTCGCACTAGTGATGCTCGCAAGGCGATGAAACAGCATCCTGTGTAAAGAATGCTACTTAGTAGTATATTCCAGTGTTAGGTGAGCACCTTGCTCATAGTCTATAGTTCAGGAAGCCAGAGATGTAGTCAAGTAGGTCATTGCTGCATGATCAGTCGTCAGATGATGCCCCAACTGAATTTGCCGACATCCAAGATTAGTCTGTAGTATTGGAGTACTGTAGTGCAGTTGCTGCTAGCTTATGTAAGCTCATAATTAAGC ATATTGNAGTTACAGATCTACCNTAANTTATGTCTGGCCGGGTTGCGGGTNTGNTAATGCTGGCATGGTTCGCTTGGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||