Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 35 cluster # 35       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_35#0 length = 675 sequences # 2  

consensusID : consensus_35#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 675
fasta sequence
                              [CTGACAAGAGCTCTTGATAGTGAGTGCCCTAAAGCCGTACCATGGTTAAGGGAGAGGTCACACTCCAGGATGTCCCTGCCTAAGAATGTCTGATCCTGCCCTCTTGGTCCCATGAAATCATAGAAAAAAGAACCCGAGCTGGATATGTTCTATAGACACATATTCAGGTACAAGGGTTCTCCACGCAAGAGCCGGATTCTACGCGATAGAGCACTAGACATTCCTCGGATTTCTTAGCTGAACAGCGATCGTCAAGCCTGACCTTGTCGTAGCCATATGACAGATCAAACGAGTTTCTCACTAACAGTCTTATACGATCCGGCTCTGTACCACACTCACGCCCACCCTTGGGTGCCTGCATCTCGATAATCCAGAGCTCGAGGTGTGGCTTTCACATTGAAAACCTACTAATCATGACTTGTGTATTCTTTTCCTGTAATCGACTCAAGGGCTCAAGGCTGTTTGCGTTTTTCCTTGCGAACACACGGAATGGAAGAAGGTTGTACGCCCTTGATTACTTACTTCCAAAAAAATAAGGNGTTGTAGCTTTGGGTTTCACTTTCATTTTGTGCTGATTCCATAAAGCTGTCCTGGAAAGTCTATATGATGAGTTTGTATGGTGTACATTGATTGATCAAAGATGTTCAAGTTTTTCTTTCAAAAAAAAAAAAAAAA]

[+] EMBL BI812055             [CTGACAAGAGCTCTTGATAGTGAGTGCCCTAAAGCCGTACCATGGTTAAGGGAGAGGTCACACTCCAGGATGTCCCTGCCTAAGAATGTCTGATCCTGCCCTCTTGGTCCCATGAAATCATAGAAAAAAGAACCCGAGCTGGATATGTTCTATAGACACATATTCAGGTACAAGGGTTCTCCACGCAAGAGCCGGATTCTACGCGATAGAGCACTAGACATTCCTCGGATTTCTTAGCTGAACAGCGATCGTCAAGCCTGACCTTGTCGTAGCCATATGACAGATCAAACGAGTTTCTCACTAACAGTCTTATACGATCCGGCTCTGTACCACACTCACGCCCACCCTTGGGTGCCTGCATCTCGATAATCCAGAGCTCGAGGTGTGGCTTTCACATTGAAAACCTACTAATCATGACTTGTGTATTCTTTTCCTGTAATCGACTCAAGGGCTCAAGGCTGTTTGCGTTTTTCCTTGCGAACACACGGAATGGAAGAAGGTTGTACGCCCTTGATTACTTACTTCCAAAAAAATAA                                                                                                                                           ]
[+] EMBL AU030478             [                                                                                                                                                                                                                                                                                            atAAACGAGTTTCT ACTAACAGTCTTATNCGATCCGGCTCTGTNCCACACTCA GCCCNCCATTGGGTNCCTGCATCTCGATAATCCA AGCTCGAGGTGTGGTTTTCAC TTGAAAACCTACTAATCATGA TTGTGTATTCTTTTCCTGTAATCGACTCAAGGGCTCAAGGCTGTTTGCGTTTTNCCTTGCGAACA A GGAATGGAAGAAGGTTGTACGCCATTGATTACTTACTTCCAATGACCACAGGNGTTGTAGCTTTGGGTTTCACTTTCATTTTGTGCTGATTCCATAAAGCTGTCCTGGAAAGTCTATATGATGAGTTTGTATGGTGTACATTGATTGATCAAAGATGTTCAAGTTTTTCTTTCAAAAAAAAAAAAAAAA]


>consensus_35#0 CTGACAAGAGCTCTTGATAGTGAGTGCCCTAAAGCCGTACCATGGTTAAGGGAGAGGTCA CACTCCAGGATGTCCCTGCCTAAGAATGTCTGATCCTGCCCTCTTGGTCCCATGAAATCA TAGAAAAAAGAACCCGAGCTGGATATGTTCTATAGACACATATTCAGGTACAAGGGTTCT CCACGCAAGAGCCGGATTCTACGCGATAGAGCACTAGACATTCCTCGGATTTCTTAGCTG AACAGCGATCGTCAAGCCTGACCTTGTCGTAGCCATATGACAGATCAAACGAGTTTCTCA CTAACAGTCTTATACGATCCGGCTCTGTACCACACTCACGCCCACCCTTGGGTGCCTGCA TCTCGATAATCCAGAGCTCGAGGTGTGGCTTTCACATTGAAAACCTACTAATCATGACTT GTGTATTCTTTTCCTGTAATCGACTCAAGGGCTCAAGGCTGTTTGCGTTTTTCCTTGCGA ACACACGGAATGGAAGAAGGTTGTACGCCCTTGATTACTTACTTCCAAAAAAATAAGGNG TTGTAGCTTTGGGTTTCACTTTCATTTTGTGCTGATTCCATAAAGCTGTCCTGGAAAGTC TATATGATGAGTTTGTATGGTGTACATTGATTGATCAAAGATGTTCAAGTTTTTCTTTCA AAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)