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Oryza sativa
cluster # 3502 cluster # 3502       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3502#0 length = 1461 sequences # 2  

consensusID : consensus_3502#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1461
fasta sequence
                              [AAGAGCTGCAGCATAGATCAACAAGTTGTAATTAATGATCATACAAGCAGGAAAAATTGCTGATCCCCTAAAAATAAAAGAAAGAAATTCCTGGGTTAGAGTGGCCATGCATTATTGCATTTCAGATGTTCTTGAGCCATTGAGTGTTGCATGCACAAAAATATTTAAGGCAGCTGGAAGATTGTGATGGGCTGGTTGTCGTGAAGGAAAGATTGGCCTAGAAATTTTATTTTAGTGATCTTGAGATAAATACAGGTCGTGAAGTTCTCTGGGATCACTACATTAGTATTACGGTTCTCGATCAGATCAAGGACTGCAGAATTGCATACTCATTTTAACTTTGGTCAAATATCGTATGGAGAAATCTGAAATACTTGGCATCAAATCTTTGGTCCAGGAACATGACAATCTTCTCCCTCAAGGAAAAGGTAACATAACAGCTACGGACTCAGGGCTGACAAAAGCATCACATATCTTGCACATGTTGCCAAACTATATCACCTAATACCTGTAATGAACAAGAGCAATTTACTCATGACAGAAGCCCAAAACTCATGGGCTTGAGATGCAGTTTAGACATAATCACTCATGGAAACCCAAATTATTTTGCTGACCAAGGAATTCATGTGCTCTTTGTCTAGTGAAATTTTGGGTGGCCGTAAAGTTAATTGACGTCAAGAGGAGCAGGATAGTTCCATGCTGAATGCATGGCTTCAGCTTTGGGAATAAGAAGTCCTGTAGACTGATCCCCAACCAGTGTGAAATTTGTCTGTTGTTGGTGCAAAGAAAAAATCAGAAGCAAACAGTGTTTGTGTGTGCCGCGTAGAAATCATCCAGCGCCATCAAAATACTGGTCCGTGCTATTTTCCCCACCATTGTTTGAAGGTCAAGGATCACTCCAACTGGGAACCCATCTACTACCCCAGTTTTGTTAGCATTTTGGGCTACAGTGAAATGGACAAGGAGTAACAGGAACAGTATGGTTTGAGGTGCTCTCTCCATTACCAGTGCTGTGGCTGTGGAATGTTTGTGAAAGACTTTGCCTCCCAAGGCCTTACACTCTTATAAGGCTAGGGGCTTGAGGAATTCAAACAGTAAGGCTAGCTTAATTTAAACTTTACGCGTG-AAATAATGTAGTGCCATAGGTGTTATTTTACTCTATTTCAGTTGTA-TTTTT-GGAACCCTT-GAAGGTC-AAATGATGTGTCCATAGCCATGCAGTGCACCATTATGCAGCTTTGCATTTCTGCAAGCTACTGACAGTACTACAGTACTAAGCAATAGGCAATAGTTACTTGCACAGATGCAAGCAATCTTTCGTTAGATCAATTGAGACTTTGAGAGAGTAGCAGTTGTTTATGTAAGTTTCAAAGCAGTTGCCTTCTTTCCTGAAGAAACTGATTTGTGCAGGAGGTTTCTGTAGCTTATTTAAAAGCCAATTGATGGGATCCTTCCGGAACTGCT]

[+] EMBL AK064560             [AAGAGCTGCAGCATAGATCAACAAGTTGTAATTAATGATCATACAAGCAGGAAAAATTGCTGATCCCCTAAAAATAAAAGAAAGAAATTCCTGGGTTAGAGTGGCCATGCATTATTGCATTTCAGATGTTCTTGAGCCATTGAGTGTTGCATGCACAAAAATATTTAAGGCAGCTGGAAGATTGTGATGGGCTGGTTGTCGTGAAGGAAAGATTGGCCTAGAAATTTTATTTTAGTGATCTTGAGATAAATACAGGTCGTGAAGTTCTCTGGGATCACTACATTAGTATTACGGTTCTCGATCAGATCAAGGACTGCAGAATTGCATACTCATTTTAACTTTGGTCAAATATCGTATGGAGAAATCTGAAATACTTGGCATCAAATCTTTGGTCCAGGAACATGACAATCTTCTCCCTCAAGGAAAAGGTAACATAACAGCTACGGACTCAGGGCTGACAAAAGCATCACATATCTTGCACATGTTGCCAAACTATATCACCTAATACCTGTAATGAACAAGAGCAATTTACTCATGACAGAAGCCCAAAACTCATGGGCTTGAGATGCAGTTTAGACATAATCACTCATGGAAACCCAAATTATTTTGCTGACCAAGGAATTCATGTGCTCTTTGTCTAGTGAAATTTTGGGTGGCCGTAAAGTTAATTGACGTCAAGAGGAGCAGGATAGTTCCATGCTGAATGCATGGCTTCAGCTTTGGGAATAAGAAGTCCTGTAGACTGATCCCCAACCAGTGTGAAATTTGTCTGTTGTTGGTGCAAAGAAAAAATCAGAAGCAAACAGTGTTTGTGTGTGCCGCGTAGAAATCATCCAGCGCCATCAAAATACTGGTCCGTGCTATTTTCCCCACCATTGTTTGAAGGTCAAGGATCACTCCAACTGGGAACCCATCTACTACCCCAGTTTTGTTAGCATTTTGGGCTACAGTGAAATGGACAAGGAGTAACAGGAACAGTATGGTTTGAGGTGCTCTCTCCATTACCAGTGCTGTGGCTGTGGAATGTTTGTGAAAGACTTTGCCTCCCAAGGCCTTACACTCTTATAAGGCTAGGGGCTTGAGGAATTCAAACAGTAAGGCTAGCTTAATTTAAACTTTACGCGTG AAATAATGTAGTGCCATAGGTGTTATTTTACTCTATTTCAGTTGTA TTTTT GGAACCCTT GAAGGTC AAATGATGTGTCCATAGCCATGCAGTGCACCATTATGCAGCTTTGCATTTCTGCAAGCTACTGACAGTACTACAGTACTAAGCAATAGGCAATAGTTACTTGCACAGATGCAAGCAATCTTTCGTTAGATCAATTGAGACTTTGAGAGAGTAGCAGTTGTTTATGTAAGTTTCAAAGCAGTTGCCTTCTTTCCTGAAGAAACTGATTTGTGCAGGAGGTTTCTGTAGCTTATTTAAAAGCCAATTGATGGGATCCTTCCGGAACTGCT]
[+] EMBL CB096972             [                                                                                                                                                                                                                                                                                                                                                                                                                                            aTAACATAACAGCTACAGATTCAGGGCTGACAAAAGCATCATATATCTTGCACATGTTGCCAAACTATATCACCTAATACCTGTAATGAACAAGAGCAATTTACTCATGACAGAAGCCCAAAACTCATGGGCTTGAGATGCAGTTTAGACATAATCACTCATGGAAACCCAAATTATTCTGCTGACCAAGGAATTCATGTGCTCTTTGTCTAGTGAAATTTTGGGTGGCCGTAAAGTTAATTGACGTCAAGAGGAGCAAGATAGTTCCACGCTGAATGCATGGCTTCAGCTTTGGGAATAAGAAGTCCTGTAGACTGATCCCCAACCAGTGTGAAATTTGTCTGTTGTTGGTGCAAAGAAAAATTCAGAAGCAAACAGTGTTTGTGTGTGCCGCGTAGAAATCATCCAGCGCCATCAAAATACTGGTCCGTGCTATTTTCCCCACCATTGTTTGAAGGTCAAGGATCACTCCAACTGGGAACCCATCTACTACCCCAGTTTTATTAGCATTTTGGGCTACAGTGAAATGGACAAGGAGTAACAGGAACAGCATGGTTTGAGGTGCTCTCTCCATTACCAGTGCTGTGGCTGTGGAATGNTTGT AAAGACTTTGCCTNCCAAGGCCTTACACTCTTATAAGGCTAGGGGCTTGANGAATTCAAACAGTAAGGCTAGCTTAATTTAAACTTTACGCGTGNAAATAATGTAGTGCCATANGTGGTATTTTACTCTATTTCAGGTGGANTTTTTGGGAACCCTTGGAAGGTCAAAAGGATGNGTCCAT                                                                                                                                                                                                                                                             ]


>consensus_3502#0 AAGAGCTGCAGCATAGATCAACAAGTTGTAATTAATGATCATACAAGCAGGAAAAATTGC TGATCCCCTAAAAATAAAAGAAAGAAATTCCTGGGTTAGAGTGGCCATGCATTATTGCAT TTCAGATGTTCTTGAGCCATTGAGTGTTGCATGCACAAAAATATTTAAGGCAGCTGGAAG ATTGTGATGGGCTGGTTGTCGTGAAGGAAAGATTGGCCTAGAAATTTTATTTTAGTGATC TTGAGATAAATACAGGTCGTGAAGTTCTCTGGGATCACTACATTAGTATTACGGTTCTCG ATCAGATCAAGGACTGCAGAATTGCATACTCATTTTAACTTTGGTCAAATATCGTATGGA GAAATCTGAAATACTTGGCATCAAATCTTTGGTCCAGGAACATGACAATCTTCTCCCTCA AGGAAAAGGTAACATAACAGCTACGGACTCAGGGCTGACAAAAGCATCACATATCTTGCA CATGTTGCCAAACTATATCACCTAATACCTGTAATGAACAAGAGCAATTTACTCATGACA GAAGCCCAAAACTCATGGGCTTGAGATGCAGTTTAGACATAATCACTCATGGAAACCCAA ATTATTTTGCTGACCAAGGAATTCATGTGCTCTTTGTCTAGTGAAATTTTGGGTGGCCGT AAAGTTAATTGACGTCAAGAGGAGCAGGATAGTTCCATGCTGAATGCATGGCTTCAGCTT TGGGAATAAGAAGTCCTGTAGACTGATCCCCAACCAGTGTGAAATTTGTCTGTTGTTGGT GCAAAGAAAAAATCAGAAGCAAACAGTGTTTGTGTGTGCCGCGTAGAAATCATCCAGCGC CATCAAAATACTGGTCCGTGCTATTTTCCCCACCATTGTTTGAAGGTCAAGGATCACTCC AACTGGGAACCCATCTACTACCCCAGTTTTGTTAGCATTTTGGGCTACAGTGAAATGGAC AAGGAGTAACAGGAACAGTATGGTTTGAGGTGCTCTCTCCATTACCAGTGCTGTGGCTGT GGAATGTTTGTGAAAGACTTTGCCTCCCAAGGCCTTACACTCTTATAAGGCTAGGGGCTT GAGGAATTCAAACAGTAAGGCTAGCTTAATTTAAACTTTACGCGTGAAATAATGTAGTGC CATAGGTGTTATTTTACTCTATTTCAGTTGTATTTTTGGAACCCTTGAAGGTCAAATGAT GTGTCCATAGCCATGCAGTGCACCATTATGCAGCTTTGCATTTCTGCAAGCTACTGACAG TACTACAGTACTAAGCAATAGGCAATAGTTACTTGCACAGATGCAAGCAATCTTTCGTTA GATCAATTGAGACTTTGAGAGAGTAGCAGTTGTTTATGTAAGTTTCAAAGCAGTTGCCTT CTTTCCTGAAGAAACTGATTTGTGCAGGAGGTTTCTGTAGCTTATTTAAAAGCCAATTGA TGGGATCCTTCCGGAACTGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)