Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3521 cluster # 3521       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3521#0 length = 781 sequences # 2  

consensusID : consensus_3521#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 781
fasta sequence
                              [TCTTTACTTTCAGCATAGTGGTGCATCTGACGGGGCTAGGGCTGGGTCTGGAAGTATCTGGCAGCCCCAGCCCGATTGTCCAGCTCCAGCGAAGTGCGGCAACGTCAACATTCCCTACCCGTTTGGCATAAGAGAAGGTTGCTTCCGACCGAAGGGCGGCTTTAATATCTCATGCAAGCAAGAACAAGCTTATATTGGACCGGACATTAGGGTCACGAATTTTGATGTAGTCCAGAGTGAGGCTCGCATCCTGACCGATATACCATCAGGGACGGTAGCATGGAAGTACAACAATGAATTTGATCCAATTGCATGGACGTCCAGAGGAGGATTACGACTTGGTAATCACCATATGGTTTCCAGCGCCAAGAACAGATTCACAGCAATCGGGTGTTCAACTGTTGCATTCATCTACGGCAGAGACAAAAAAGGTAGCAATGGACAGTTTGATCAGTTCACCAGCTTATGTGGATCGTTCTGCTTCGACGAGGGTAGCATCGAAGACGGCCCAGAGTGCTCCGGCATGGGTTGTTGCCAAGTCCCCATTTCAACCAACCTTAGGAGGTTCAGTTTAGGATTCTATAATTATAACACAACCAAAAAAGTTCTTAATTTTAGTTCACGCAGCTATGCGTTCGTGGTCGAGAAGGATCAATTCAAGTTCAAGAGTTCCTATGCCAAAGCAGACAATTTCATGGAGGAGCTCGCTCGTGGGATTCCTATAATTCTCGAGTGGATTGCTGGTAATGAAAACCTGCAAGGAAGCAGCCCTGAAAGAGTC]

[+] EMBL CB617891             [TCTTTACTTTCAGCATAGTGGTGCATCTGACGGGGCTAGGGCTGGGTCTGGAAGTATCTGGCAGCCCCAGCCCGATTGTCCAGCTCCAGCGAAGTGCGGCAACGTCAACATTCCCTACCCGTTTGGCATAAGAGAAGGTTGCTTCCGACCGAAGGGCGGCTTTAATATCTCATGCAAGCAAGAACAAGCTTATATTGGACCGGACATTAGGGTCACGAATTTTGATGTAGTCCAGAGTGAGGCTCGCATCCTGACCGATATACCATCAGGGACGGTAGCATGGAAGTACAACAATGAATTTGATCCAATTGCATGGACGTCCAGAGGAGGATTACGACTTGGTAATCACCATATGGTTTCCAGCGCCAAGAACAGATTCACAGCAATCGGGTGTTCAACTGTTGCATTCATCTACGGCAGAGACAAAAAAGGTAGCAATGGACAGTTTGATCAGTTCACCAGCTTATGTGGATCGTTCTGCTTCGACGAGGGTAGCATCGAAGACGGCCCAGAGTGCTCCGGCATGGGTTGTTGCCAAGTCCCCATTTCAACCAACCTTAGGAGGTTCAGTTTAGGATTCTATAATTATAACACAACCAAAAAAGTTCTTAATTTTAGTTCACGCAGCTATGCGTTCGTGGTCGAGAAGGATCAATTCAAGTTCAAGAGTTCCTATGCCAAAGCAGACAATTTCATGGAGGAGCTCGCTCGTGGGATTCCTATAATTCTCGAGTGGATTGCTGGTAATGAAAACCTGCAAGGAAGCAGCCCTGAAAGAGTC]
[+] EMBL CB617832             [TCTTTACTTTCAGCATAGTGGTGCATCTGACGGGGCTAGGGCTGGGTCTGGAAGTATCTGGCAGCCCCAGCCCGATTGTCCAGCTCCAGCGAAGTGCGGCAACGTCAACATTCCCTACCCGTTTGGCATAAGAGAAGGTTGCTTCCGACCGAAGGGCGGCTTTAATATCTCATGCAAGCAAGAACAAGCTTATATTGGACCGGACATTAGGGTCACGAATTTTGATGTAGTCCAGAGTGAGGCTCGCATCCTGACCGATATACCATCAGGGACGGTAGCATGGAAGTACAACAATGAATTTGATCCAATTGCATGGACGTCCAGAGGAGGATTACGACTTGGTAATCACCATATGGTTTCCAGCGCCAAGAACAGATTCACAGCAATCGGGTGTTCAACTGTTGCATTCATCTACGGCAGAGACAAAAAAGGTAGCAATGGACAGTTTGATCAGTTCACCAGCTTATGTGGATCGTTCTGCTTCGACGAGGGTAGCATCGAAGACGGCCCAGAGTGCTCCGGCATGGGTTGTTGCCAAGTCCCCATTTCAACCAACCTTAGGAGGTTCAGTTTAGGATTCTATAATTATAACACAACCAAAAAAGTTCTTAATTTTAGTTCACGCAGCTATGCGTTCGTGGTCGAGAAGGATCAATTCAAGTTCAAGAGTTCCTATGCCAAAGCAGACAATTTCATGGAGGAGCTCGCTCGTGGGATTCCTATAATTCTCGAGTGGATTGCTGGTAATG AAACCTGCAAGGAAGCAGCCCTGAAGGAGT ]


>consensus_3521#0 TCTTTACTTTCAGCATAGTGGTGCATCTGACGGGGCTAGGGCTGGGTCTGGAAGTATCTG GCAGCCCCAGCCCGATTGTCCAGCTCCAGCGAAGTGCGGCAACGTCAACATTCCCTACCC GTTTGGCATAAGAGAAGGTTGCTTCCGACCGAAGGGCGGCTTTAATATCTCATGCAAGCA AGAACAAGCTTATATTGGACCGGACATTAGGGTCACGAATTTTGATGTAGTCCAGAGTGA GGCTCGCATCCTGACCGATATACCATCAGGGACGGTAGCATGGAAGTACAACAATGAATT TGATCCAATTGCATGGACGTCCAGAGGAGGATTACGACTTGGTAATCACCATATGGTTTC CAGCGCCAAGAACAGATTCACAGCAATCGGGTGTTCAACTGTTGCATTCATCTACGGCAG AGACAAAAAAGGTAGCAATGGACAGTTTGATCAGTTCACCAGCTTATGTGGATCGTTCTG CTTCGACGAGGGTAGCATCGAAGACGGCCCAGAGTGCTCCGGCATGGGTTGTTGCCAAGT CCCCATTTCAACCAACCTTAGGAGGTTCAGTTTAGGATTCTATAATTATAACACAACCAA AAAAGTTCTTAATTTTAGTTCACGCAGCTATGCGTTCGTGGTCGAGAAGGATCAATTCAA GTTCAAGAGTTCCTATGCCAAAGCAGACAATTTCATGGAGGAGCTCGCTCGTGGGATTCC TATAATTCTCGAGTGGATTGCTGGTAATGAAAACCTGCAAGGAAGCAGCCCTGAAAGAGT C



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)