Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3574 cluster # 3574       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3574#0 length = 898 sequences # 2  

consensusID : consensus_3574#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 898
fasta sequence
                              [TTGAGATGATGTCGACAGATGTTGGGTGGGAGCTACTTTGGAAGAGTGAATATCAAAGAAGAGAAAGAAGTGGAAACCTTGCAACACATAGGGACCAAGATTGTCAGCAAATGTGGTGGTCTTCCTCTTGCAATCAAGGTTATTGCTAGTGTTCTAGCAACCAAGGAGAAGACCAAGAACACATGGGAAAAAGTTATAGAAAGCAGTGCATGGTCTATGAGCAAGCTTCCAGCTGAACTTAGAGGTGCTTTGTACCTAAGTTATGATGATCTACCACACAATCTAAAGCAGTGCTTCCTTTATTGTGCTCTCTATGTCGAAGGTCAGATGATGCATCATGCTGATCTTGTGCGGTTTTGGGTTGCAGAAGGCTTTGTCGAAGAGCAAGAAGGCCAGTTACTAGAAGATACAGCAGAAGAATATTACCATGAGTTAATTTGTAGGCACCTTCTTGAACCAGATCCTTTTTATTTCGATCACTACAGGTGCAAAATGCATGATCTCTTGAGGTATCTTGCTCAACATTTATCAAGAGAAGAGTGCTATTTTGATCAACTACCTTTAGAGCCTACTACTTGGTCTAAACTGAGACGTATTTCGATTGTCAACAAAACAGATATGTTATCAAGTGTGGTTGAAAAAGGTCACTGCAGAGTAAGGACTTTGATGTTTTGCATGTCACCAAACATAGATAGTGATGTCTTCATGAGGTTTCCACATCTTCGAGTTTTGGACTTGACTGGCTCAATTGTACAAAGAATTCCAGATAGCATCAACAGCTTGATCCATCTACGTTTGCTTGATCTTGATGCTACCGATATATCTTGTCTTCCAGACTCCATCGGTTCTCTCACAAACCTGCAAATATTGAACTTGCAGAGGTGCTATGCATTGCATG]

[+] EMBL CF303714             [TTGAGATGATGTCGACAGATGTTGGGTGGGAGCTACTTTGGAAGAGTGAATATCAAAGAAGAGAAAGAAGTGGAAACCTTGCAACACATAGGGACCAAGATTGTCAGCAAATGTGGTGGTCTTCCTCTTGCAATCAAGGTTATTGCTAGTGTTCTAGCAACCAAGGAGAAGACCAAGAACACATGGGAAAAAGTTATAGAAAGCAGTGCATGGTCTATGAGCAAGCTTCCAGCTGAACTTAGAGGTGCTTTGTACCTAAGTTATGATGATCTACCACACAATCTAAAGCAGTGCTTCCTTTATTGTGCTCTCTATGTCGAAGGTCAGATGATGCATCATGCTGATCTTGTGCGGTTTTGGGTTGCAGAAGGCTTTGTCGAAGAGCAAGAAGGCCAGTTACTAGAAGATACAGCAGAAGAATATTACCATGAGTTAATTTGTAGGCACCTTCTTGAACCAGATCCTTTTTATTTCGATCACTACAGGTGCAAAATGCATGATCTCTTGAGGTATCTTGCTCA                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB621361             [                                                                               TGCAACACATAGGGACCAAGATTGTCAGCAAATGTGGTGGTCTTCCTCTTGCAATCAAGGTTATTGCTAGTGTTCTAGCAACCAAGGAGAAGACCAAGAACACATGGGAAAAAGTTGTAGAAAGCAGTGCATGGTCTATGAGCAAGCTTCCAGCTGAACTTAGAGGTGCTTTGTACCTAAGTTATGATGATCTACCACACAATCTAAAGCAGTGCTTCCTTTATTGTGCTCTCTATGTCGAAGGTCAGATGATGCATCGTGCTGATCTTGTGCGGTTTTGGGTTGCAGAAGGCTTTGTCGAAGAGCAAGAAGGCCAGTTACTAGAAGATACAGCAGAAGAATATTACCATGAGTTAATTTGTAGGCACCTTCTTGAACCAGATCCTTTTTATTTCGATCACTACAGGTGCAAAATGCATGATCTCTTGAGGTATCTTGCTCAACATTTATCAAGAGAAGAGTGCTATTTTGATCAACTACCTTTAGAGCCTACTACTTGGTCTAAACTGAGACGTATTTCGATTGTCAACAAAACAGATATGTTATCAAGTGTGGTTGAAAAAGGTCACTGCAGAGTAAGGACTTTGATGTTTTGCATGTCACCAAACATAGATAGTGATGTCTTCATGAGGTTTCCACATCTTCGAGTTTTGGACTTGACTGGCTCAATTGTACAAAGAATTCCAGATAGCATCAACAGCTTGATCCATCTACGTTTGCTTGATCTTGATGCTACCGATATATCTTGTCTTCCAGACTCCATCGGTTCTCTCACAAACCTGCAAATATTGAACTTGCAGAGGTGCTATGCATTGCATG]


>consensus_3574#0 TTGAGATGATGTCGACAGATGTTGGGTGGGAGCTACTTTGGAAGAGTGAATATCAAAGAA GAGAAAGAAGTGGAAACCTTGCAACACATAGGGACCAAGATTGTCAGCAAATGTGGTGGT CTTCCTCTTGCAATCAAGGTTATTGCTAGTGTTCTAGCAACCAAGGAGAAGACCAAGAAC ACATGGGAAAAAGTTATAGAAAGCAGTGCATGGTCTATGAGCAAGCTTCCAGCTGAACTT AGAGGTGCTTTGTACCTAAGTTATGATGATCTACCACACAATCTAAAGCAGTGCTTCCTT TATTGTGCTCTCTATGTCGAAGGTCAGATGATGCATCATGCTGATCTTGTGCGGTTTTGG GTTGCAGAAGGCTTTGTCGAAGAGCAAGAAGGCCAGTTACTAGAAGATACAGCAGAAGAA TATTACCATGAGTTAATTTGTAGGCACCTTCTTGAACCAGATCCTTTTTATTTCGATCAC TACAGGTGCAAAATGCATGATCTCTTGAGGTATCTTGCTCAACATTTATCAAGAGAAGAG TGCTATTTTGATCAACTACCTTTAGAGCCTACTACTTGGTCTAAACTGAGACGTATTTCG ATTGTCAACAAAACAGATATGTTATCAAGTGTGGTTGAAAAAGGTCACTGCAGAGTAAGG ACTTTGATGTTTTGCATGTCACCAAACATAGATAGTGATGTCTTCATGAGGTTTCCACAT CTTCGAGTTTTGGACTTGACTGGCTCAATTGTACAAAGAATTCCAGATAGCATCAACAGC TTGATCCATCTACGTTTGCTTGATCTTGATGCTACCGATATATCTTGTCTTCCAGACTCC ATCGGTTCTCTCACAAACCTGCAAATATTGAACTTGCAGAGGTGCTATGCATTGCATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)