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Oryza sativa
cluster # 3593 cluster # 3593       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3593#0 length = 1112 sequences # 2  

consensusID : consensus_3593#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1112
fasta sequence
                              [TTGAGGACCTCCCCCGTCCGCTCGCCGTGGACTCCGACTCCTCGCGAGTTCGCCGCCATCGCCGATCCCCATCCATCCCGCGAGTAGAGCAGAGCAGCGCCGCAGTCGTTCGTCGCCCTGCTGCTGCTCCCCGCCGCTGGGCTTGAGGAAATCCCAGGATTGCGCTCGCTGGCGTCGCGTGGCAGCTCCAACAAGTTGAACTGTATTGCAGGTTTCAGTGATCCTTGAACAAGCTTATTGAAGATGCCAAATGCAGAGAGCAGTTTGTTCAAGATGCCAACTGCAGATGCAAATATTGCTGCCCTGCACAAGGAATGGGACGATGCATTGTGCCCAATTTGCATGGATCATCCCCACAATGCTGTTCTTCTGCTGTGCAGTTCCCATGACAAAGGATGCAGATCCTATATATGCGATACAAGCTATAGACATTCGAATTGCCTAGACAGGTTCAAGAAAATGAAAGTAGACCACAATGACGGTTCGTCACAGCAAAGTTCATCGTTGCCTAGGGACATAAGTAGCCAAAATGTACCCCAGAGATCTCGTTTTGATCCCACTGGAGAAATCCAAACAGGCATATCTGAATCCCATGAAATTTTCAATCATCGAGATGCTATCCAAAGCTCTGCTGGCCTATCTGGACAGCAGGGAGAAAATAGCTATAATCAAGATCTAGATTTGACTTTGGAAGCTCAGCAAAGAGAGAGCAGTAGCACTGTGGAGTCAAGTGAACTGACACGCTTGAACCAATTGGCATGCCCATTATGTAGGGGCACTGTCAAAGGCTGGAAGATCATCAAAGAGGCCAGAGAATATTTGGATGAGAAGTCGAGATCTTGCTCGCGGGAAACATGTGCATTTTCTGGCAACTACAGGGAGCTCCGTAGACATGCCCGGAGAGTCCATCCCACAACAAGGCCTGCTGATGTGGATCCATCAAGACGCCGTGCATGGCACCGCCTGGAGCACCAGCGTGAATATGGTGACATACTAAGTGCAATCAGGTCGGCTATGCCCGGAGCAGTTGTGTTTGGTGATTATGTTGTTGAAGGGGGTGACATGTTTTCACCTGACCAGGAAGGAGGCATGCCAAAATGAACCAAGTGGAT]

[+] EMBL CB623287             [TTGAGGACCTCCCCCGTCCGCTCGCCGTGGACTCCGACTCCTCGCGAGTTCGCCGCCATCGCCGATCCCCATCCATCCCGCGAGTAGAGCAGAGCAGCGCCGCAGTCGTTCGTCGCCCTGCTGCTGCTCCCCGCCGCTGGGCTTGAGGAAATCCCAGGATTGCGCTCGCTGGCGTCGCGTGGCAGCTCCAACAAGTTGAACTGTATTGCAGGTTTCAGTGATCCTTGAACAAGCTTATTGAAGATGCCAAATGCAGAGAGCAGTTTGTTCAAGATGCCAACTGCAGATGCAAATATTGCTGCCCTGCACAAGGAATGGGACGATGCATTGTGCCCAATTTGCATGGATCATCCCCACAATGCTGTTCTTCTGCTGTGCAGTTCCCATGACAAAGGATGCAGATCCTATATATGCGATACAAGCTATAGACATTCGAATTGCCTAGACAGGTTCAAGAAAATGAAAGTAGACCACAATGACGGTTCGTCACAGCAAAGTTCATCGTTGCCTAGGGACATAAGTAGCCAAAATGTACCCCAGAGATCTCGTTTTGATCCCACTGGAGAAATCCAAACAGGCATATCTGAATCCCATGAAATTTTCAATCATCGAGATGCTATCCAAAGCTCTGCTGGCCTATCTGGACAGCAGGGAGAAAATAGCTATAATCAAGATCTAGATTTGACTTTGGAAGCTCAGCAAAGAGAGAGCAGTAGCACTGTGGAGTCAAGTGAACTGACACGCTTGAACCAATTGGCATGCCCATTATGTAGGGGCACT                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB641828             [                                                                                                                                                                                                                                                                                                                                                     CATGGATCATCCCCACAATGCTGTTCTTCTGCTGTGCAGTTCCCATGACAAAGGATGCAGATCCTATATATGCGATACAAGCTATAGACATTCGAATTGCCTAGACAGGTTCAAGAAAATGAAAGTAGACCACAATGACGGTTCGTCACAGCAAAGTTCATCGTTGCCTAGGGACATAAGTAGCCAAAATGTACCCCAGAGATCTCATTTTGATCCCACTGGAGAAATCCAAACAGGCATATCTGAATCCCATGAAATTTTCAATCATCGAGATGCTATCCAAAGCTCTGCTGGCCTATCTGGACAGCAGGGAGAAAATAGCTATAATCAAGATCTAGATTTGACTTTGGAAGCTCAGCAAAGAGAGAGCAGTAGCACTGTGGAGTCAAGTGAACTGACACGCTTGAACCAATTGGCATGCCCATTATGTAGGGGCACTGTCAAAGGCTGGAAGATCATCAAAGAGGCCAGAGAATATTTGGATGAGAAGTCGAGATCTTGCTCGCGGGAAACATGTGCATTTTCTGGCAACTACAGGGAGCTCCGTAGACATGCCCGGAGAGTCCATCCCACAACAAGGCCTGCTGATGTGGATCCATCAAGACGCCGTGCATGGCACCGCCTGGAGCACCAGCGTGAATATGGTGACATACTAAGTGCAATCAGGTCGGCTATGCCCGGAGCAGTTGTGTTTGGTGATTATGTTGTTGAAGGGGGTGACATGTTTTCACCTGACCAGGAAGGAGGCATGCCAAAATGAACCAAGTGGAT]


>consensus_3593#0 TTGAGGACCTCCCCCGTCCGCTCGCCGTGGACTCCGACTCCTCGCGAGTTCGCCGCCATC GCCGATCCCCATCCATCCCGCGAGTAGAGCAGAGCAGCGCCGCAGTCGTTCGTCGCCCTG CTGCTGCTCCCCGCCGCTGGGCTTGAGGAAATCCCAGGATTGCGCTCGCTGGCGTCGCGT GGCAGCTCCAACAAGTTGAACTGTATTGCAGGTTTCAGTGATCCTTGAACAAGCTTATTG AAGATGCCAAATGCAGAGAGCAGTTTGTTCAAGATGCCAACTGCAGATGCAAATATTGCT GCCCTGCACAAGGAATGGGACGATGCATTGTGCCCAATTTGCATGGATCATCCCCACAAT GCTGTTCTTCTGCTGTGCAGTTCCCATGACAAAGGATGCAGATCCTATATATGCGATACA AGCTATAGACATTCGAATTGCCTAGACAGGTTCAAGAAAATGAAAGTAGACCACAATGAC GGTTCGTCACAGCAAAGTTCATCGTTGCCTAGGGACATAAGTAGCCAAAATGTACCCCAG AGATCTCGTTTTGATCCCACTGGAGAAATCCAAACAGGCATATCTGAATCCCATGAAATT TTCAATCATCGAGATGCTATCCAAAGCTCTGCTGGCCTATCTGGACAGCAGGGAGAAAAT AGCTATAATCAAGATCTAGATTTGACTTTGGAAGCTCAGCAAAGAGAGAGCAGTAGCACT GTGGAGTCAAGTGAACTGACACGCTTGAACCAATTGGCATGCCCATTATGTAGGGGCACT GTCAAAGGCTGGAAGATCATCAAAGAGGCCAGAGAATATTTGGATGAGAAGTCGAGATCT TGCTCGCGGGAAACATGTGCATTTTCTGGCAACTACAGGGAGCTCCGTAGACATGCCCGG AGAGTCCATCCCACAACAAGGCCTGCTGATGTGGATCCATCAAGACGCCGTGCATGGCAC CGCCTGGAGCACCAGCGTGAATATGGTGACATACTAAGTGCAATCAGGTCGGCTATGCCC GGAGCAGTTGTGTTTGGTGATTATGTTGTTGAAGGGGGTGACATGTTTTCACCTGACCAG GAAGGAGGCATGCCAAAATGAACCAAGTGGAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)