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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3602 cluster # 3602       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3602#0 length = 880 sequences # 2  

consensusID : consensus_3602#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 880
fasta sequence
                              [GGTCCGGGCCCCCCCCGATAACTGGATTGCTTATGGCGAGAATGAAAGTACATGCTCATTCGAGTGGATAGCCAATCGAGCAAACCACAGGTGGTTCTCTTTCAAGTTTGGTTAGTGCTCTAGTCTGTTCTCCAGTTGGTTTCTGCCCACTTTGACTGACCAATCGTCAATAATCAATACTGAATGCTGACTGACCAATCTTCCAGAAAGGCTAGCTAAAGATAAATATTTTTGGAAATAAACCCCTGTAGGATTTGTTTTCAACATATAGGTCTCCATGTACACACTCCCCCTTCTGCCGCTGTACCACACCAAAACTGAATTTTACATGTAGCTCTCTCTCATAAGTCGATGGTTGGGCGCTCGCACTCCCCTCTTCCGGCCCTCCCGCTGGGGCGCCGCCACAAGCCACCAGCCACCACGCCGTCTTCGTTGCCGCACCAGAGCTGAGCGCGGCCAATGAGTCGGCCTGCACCCTGCCATCTCTGTTACCACATTCTCCATGCAGAGGTAAGCAACACCATGGCAAGACCTCCAGAACACCTCGTGCGCCGACGATTCATCCACCGCCTCGTGGCACAGGTGATTGACGGCGTTTGGCAGCAACAACTCCTCCAACTCATGCAATCCAACATTGGTGTGCACGGGTTGCTCCTCCCTCCCATCGATCGCCACAACCGTGACGCTCTCAGCCCCGGACAGCAGCTGCTCTGGTGACGCGTGTGGCGCGAAGACGGCCGTCAGCTGAAGCATAGGTGGCCCCGAATTTCCAGAAAAACCAGATGACGATGAAGACGATGATTGCTTCTGTCTCTGGCTCGTAGAGACATAGCGCTGCACGGCCAGTTTGATCACCGGCTCC-GGGATGCACCTGACGGCT]

[+] EMBL CB624727             [GGTCCGGGCCCCCCCCGATAACTGGATTGCTTATGGCGAGAATGAAAGTACATGCTCATTCGAGTGGATAGCCAATCGAGCAAACCACAGGTGGTTCTCTTTCAAGTTTGGTTAGTGCTCTAGTCTGTTCTCCAGTTGGTTTCTGCCCACTTTGACTGACCAATCGTCAATAATCAATACTGAATGCTGACTGACCAATCTTCCAGAAAGGCTAGCTAAAGATAAATATTTTTGGAAATAAACCCCTGTAGGATTTGTTTTCAACATATAGGTCTCCATGTACACACTCCCCCTTCTGCCGCTGTACCACACCAAAACTGAATTTTACATGTAGCTCTCTCTCATAAGTCGATGGTTGGGCGCTCGCACTCCCCTCTTCCGGCCCTCCCGCTGGGGCGCCGCCACAAGCCACCAGCCACCACGCCGTCTTCGTTGCCGCACCAGAGCTGAGCGCGGCCAATGAGTCGGCCTGCACCCTGCCATCTCTGTTACCACATTCTCCATGCAGAGGTAAGCAACACCATGGCAAGACCTCCAGAACACCTCGTGCGCCGACGATTCATCCACCGCCTCGTGGCACAGGTGATTGACGGCGTTTGGCAGCAACAACTCCTCCAACTCATGCAATCCAACATTGGTGTGCACGGGTTGCTCCTCCCTCCCATCGATCGCCACAACCGTGACGCTCTCAGCCCCGGACAGCAGCTGCTCTGGTGACGCGTGTGGCGCGAAGACGGCCGTCAGCTGAAGCATAGGTGGCCCCGAATTTCCAGAAAAACCAGATGACGATGAAGACGATGATTGCTTCTGTCTCTGGCTCGTAGAGACATAGCGCTGCACGGCCAGTTTGATCACCGGCTCC GGGATGCACCTGACGGCT]
[+] EMBL CB624683             [                       GGTTTGCTTATGGCGAGAATGAAAGTACATG TC TTCG GTGGATAGACAATCGAGCAAACCAAAGGTGGTTCTCTTTCAAGTTTGGTTAGTGCTCTAGTCTGTTCTCCAGTTGGTTTCTGCCCACTTTGACTGACCAATCGTCAATAGTCAATACTGAATGCTGACTGACCAATCTTCCAGAAAGGCTAGCTAAAGATAAATATTTTTGGAAATAAACCCCTGTAGGATTTGTTTTCAACATATAGGTCTCCATGTACACACTCCCCCTTCTGCCGCTGTACCACACCAAAACTGAATTTTACATGTAGCTCTCTCTCATAAGTCGATGGTTGGGCGCTCGCACTCCCCTCTTCCGGCCCTCCCGCTGGGGCGCCGCCACAAGCCACCAGCCACCACGCCGTCTTCGTTGCCGCACCAGAGCTGAGCGCGGCCAATGAGTCGGCCTGCACCCTGCCATCTCTGTTACCACATTCTCCATGCAGAGGTAAGCAACACCATGGCAAGACCTCCAGAACACCTCGTGCGCCGACGATTCATCCACCGCCTCGTGGCACAGGTGATTGACGGCGTTTGGCAGCAGCAACTCCTCCAACTCATGCAATCCAACATTGGTGTGCACGGGTTGCTCCTCCCTCCCATCGATCGCCACAACCGTGACGCTCTCAGCCCCGGACAGCAGCTGCTCTGGTGACGCGTGTGGCGCGAAGACGGCCGTCAGCTGAAGCAGAGGTGGCCCCGAATTTCCAGAAAAACCAGATGACGATGAAGACGATGATTGCTTCTGTCTCTGGCTCGTAGAGACATAGCGCTGCACGGCCAGTTTGATCACCGGCTCCGGGGATGC           ]


>consensus_3602#0 GGTCCGGGCCCCCCCCGATAACTGGATTGCTTATGGCGAGAATGAAAGTACATGCTCATT CGAGTGGATAGCCAATCGAGCAAACCACAGGTGGTTCTCTTTCAAGTTTGGTTAGTGCTC TAGTCTGTTCTCCAGTTGGTTTCTGCCCACTTTGACTGACCAATCGTCAATAATCAATAC TGAATGCTGACTGACCAATCTTCCAGAAAGGCTAGCTAAAGATAAATATTTTTGGAAATA AACCCCTGTAGGATTTGTTTTCAACATATAGGTCTCCATGTACACACTCCCCCTTCTGCC GCTGTACCACACCAAAACTGAATTTTACATGTAGCTCTCTCTCATAAGTCGATGGTTGGG CGCTCGCACTCCCCTCTTCCGGCCCTCCCGCTGGGGCGCCGCCACAAGCCACCAGCCACC ACGCCGTCTTCGTTGCCGCACCAGAGCTGAGCGCGGCCAATGAGTCGGCCTGCACCCTGC CATCTCTGTTACCACATTCTCCATGCAGAGGTAAGCAACACCATGGCAAGACCTCCAGAA CACCTCGTGCGCCGACGATTCATCCACCGCCTCGTGGCACAGGTGATTGACGGCGTTTGG CAGCAACAACTCCTCCAACTCATGCAATCCAACATTGGTGTGCACGGGTTGCTCCTCCCT CCCATCGATCGCCACAACCGTGACGCTCTCAGCCCCGGACAGCAGCTGCTCTGGTGACGC GTGTGGCGCGAAGACGGCCGTCAGCTGAAGCATAGGTGGCCCCGAATTTCCAGAAAAACC AGATGACGATGAAGACGATGATTGCTTCTGTCTCTGGCTCGTAGAGACATAGCGCTGCAC GGCCAGTTTGATCACCGGCTCCGGGATGCACCTGACGGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)