These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3628#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2853 fasta sequence [TCCTCGAGAGAGGAGAGAAAAAGGGTGGCAGAGGCAGGGCAACCCGCGTACCAGCCAAGCCAACCCAGCCCAGCTGCGTCGTCACCATCTCCTCCTCCTCATCCTCCTCCGGCTCGTCCGCCGCCGCCGCCAATCCGTTGTTCCGAGAGCAATTCAAAGGAAGATAGCCAGCATTGAATAGAATTGTCTCGGTTTCTCAAAGTCCTCAATGTCCAAAGTATTGGAAAGAAGAAATTCATTTGGTGGTAGCACTCCTACGAGTTCAGCTTCAGGTTCAAGAAAGGATGAGAAAACGACACCCCATTACCTAAGAGCTTCTACAGGTTCTTGCCATAATTTATGCAAATATGGACACAAAAATCCTTTTGAGGAAGAGAAGAAGCTTTCAACTTCAGGAGGCAGAAGAAAGAAACTTCCTAGTCATTTAAATAATTTGACGTTGCACAGATCAGCTATCTTGGATAGATCAAAGGATGTCAGGCAGAGAAATCTTTCTCTAGCCAAGTCGAGTATATCTCTGGGTGAATCTGACCGCATTGCTCCCAAGAAAACACAAGCAAATTTGAAAGGATCCTCTGATCATTTGATTACACGCACTTCTTCATCAGCTGATCATAAAAACGTGAACCTTGATGGAAGAAAGAAGCATCTAACAGTTGCACAGAAGACTTCAGCTGATTCAGGATCTTCCAATGGAGTTCCTAAATTTGACAAAAAATCAGCAATGCCAGTTAAGGGAACCATAGTGCCTGCCAAGTTGAAGCTGGCAGAGATGCCACAACTGGAGGAATCTAGAACTATGGAAAAGGTCACAACGGTCAAGCAATCATCAATTAAGAGACCGACTTCATTGCCTACTAAGCTTAACTTGATTAAGCAAGTGCCCGTGCCATCTCAGGTTTCTAGTCATCTACTTTCTTCAAAAGCTAAACGTACTGTAAAGGGAGAGCTTACATCTTCACCAGCAACTGTTACTGGTGTGCGTCGAAGTAACAGTGATAAAACTGGAAGAAGTTCGATGAATTCAAGCAAGCCAAGTATCAATGGGAAGGAAGGCTTGCATATGGCCAGATCATCATTCTCTGTAGAATCGAAGATGGATGTTTCTGTTGTAATACAAGAACATGATGTGCAAGATTCATTCATAAGAGGTCTTCATGTGGAGTCGACACTGGCAGGAGTGTCTTCAGATACCACAGAATGTGTTGATGAATCTAGATCAGCACCAGAAGAAATAATTAGGCCTGTGTCAGGGGATGATGGGATGGAAAGCAATCGGAAGAATGAAGCATCAGGAGGGAATGAAGAACCCCTGCAGAGCTCCATTGTAACAGGCTTGCTGCAATCATCGGATGATCAGCAACTCAAGAATGCACTGAGCAATTTAGAGGCAGAAGAAAACCAAACAGACGATGCTTCTCCTTGCCAATCATCTAAAAACTCGATAGCTGTGGAAAATGCAGTTCTGGGCGACTCTCTATCAACCGAAAATAGTTCAGAAATTGAAGCTGATGGAGTGAAAGCCAACGCTAGCATGGAGTCTCAAGACGCTGAAGGTAATGAAGAAGAGGAAGCCCATGAAGGCCTTCAAGAATCTATAGAACAGTTGGCACTCGGTGAAAAACATGCTAAGGAGCCTGGATCTTTTCTTGGTTCCACCTCAGGAAATACAGTGGAAGATGTCAAGGCTGATGAAATATTTGAGGGTTGGACTAATAACAGTCCTTCACACTGCCAACCAATTTCAGAAACTTCATCAGATGGTGAACTTCTGGGGGAGCCAAAGTCTGTGCAAATTCAACCAAGTGATTCTACTCTACAAACAGATGGGTTAGTGATTTCTAGTACTGGCAACACCTTTGAACAGGATGAACTGAAACCAGGGTTTTTCCTTCAACAGTCACCTGAAGAACTATCAGAGGATGAATTTTACGAAGAGTATGATTTTGAGTTAAGTGAATTAGATGAATCTGGTACAGAAGATGAAGGACCAACGATCAATAAAAACAGCTATGATCATTTAAAGGCTGATGGACAACGACCAAAAAGAATCTCAGCGCTTGAACAGGATGATGATAGTGCCACACCTTACAAATTGAAATTTAAGAGAGGTAAAATTGTTGAACTCCAACCAGACAGTAATGGCCCAAGAAAACTCAAATTTAGAAGAAGAAGTGCAAGTGAATTTTCAAGCAGTGAAGGCCTGTCAGCTAGAAGAATATATAAGATGAATAGCACAATAGATGCTGGACCTTCTAACCTAGATGTGGAATCTCCTGGTGTGAAACTGCGACACCAAGATACACAAGAGAAGAAAGATGCACAGGGGCTGTTTAATAATGTTATAGAAGAAACTGCAAGTAAACTTGTCGAGTCCCGGAAAAGCAAGGTAAAGGCTTTAGTTGGTGCTTTTGAA-ACAGTGATCTTGCTCCAGGACGGCAAACCCGCGTCTACACCACATGCTGGCAATTCACCACATTTATTTCATGATGACGAGGGAAATGCATCTGAGCAAGCTGCATAGATCATGTGTGCCTTTTTAACATTGCCAACTTGGCGGTCATGTTTTCAGCTTTCTTCTTCTTCTTTTTTATTTTTTTTT-CTGATCTGGATTAATG-CAGAGGATG-TTGTGTAG-CTTGTACA-TTAAATTTCTTTAACAAG-TAATATTTT-CTCAACAGGTTTAGA-GTATAATAAGTAGT-CAATGTA-CTTGTAAATAGTGATGT-CAGGTTTATTTCATTGTAAATCAAATGAGAAGTTATAAAACCAAGTGTGCTTTACTTGTAATTGGATTTCCAATGCTATCAAGAGAGGTGATGGCTTGGAGCTTGTTTACCACCATTTCTGTAGCCAAAA] [+] EMBL AK070892 [TCCTCGAGAGAGGAGAGAAAAAGGGTGGCAGAGGCAGGGCAACCCGCGTACCAGCCAAGCCAACCCAGCCCAGCTGCGTCGTCACCATCTCCTCCTCCTCATCCTCCTCCGGCTCGTCCGCCGCCGCCGCCAATCCGTTGTTCCGAGAGCAATTCAAAGGAAGATAGCCAGCATTGAATAGAATTGTCTCGGTTTCTCAAAGTCCTCAATGTCCAAAGTATTGGAAAGAAGAAATTCATTTGGTGGTAGCACTCCTACGAGTTCAGCTTCAGGTTCAAGAAAGGATGAGAAAACGACACCCCATTACCTAAGAGCTTCTACAGGTTCTTGCCATAATTTATGCAAATATGGACACAAAAATCCTTTTGAGGAAGAGAAGAAGCTTTCAACTTCAGGAGGCAGAAGAAAGAAACTTCCTAGTCATTTAAATAATTTGACGTTGCACAGATCAGCTATCTTGGATAGATCAAAGGATGTCAGGCAGAGAAATCTTTCTCTAGCCAAGTCGAGTATATCTCTGGGTGAATCTGACCGCATTGCTCCCAAGAAAACACAAGCAAATTTGAAAGGATCCTCTGATCATTTGATTACACGCACTTCTTCATCAGCTGATCATAAAAACGTGAACCTTGATGGAAGAAAGAAGCATCTAACAGTTGCACAGAAGACTTCAGCTGATTCAGGATCTTCCAATGGAGTTCCTAAATTTGACAAAAAATCAGCAATGCCAGTTAAGGGAACCATAGTGCCTGCCAAGTTGAAGCTGGCAGAGATGCCACAACTGGAGGAATCTAGAACTATGGAAAAGGTCACAACGGTCAAGCAATCATCAATTAAGAGACCGACTTCATTGCCTACTAAGCTTAACTTGATTAAGCAAGTGCCCGTGCCATCTCAGGTTTCTAGTCATCTACTTTCTTCAAAAGCTAAACGTACTGTAAAGGGAGAGCTTACATCTTCACCAGCAACTGTTACTGGTGTGCGTCGAAGTAACAGTGATAAAACTGGAAGAAGTTCGATGAATTCAAGCAAGCCAAGTATCAATGGGAAGGAAGGCTTGCATATGGCCAGATCATCATTCTCTGTAGAATCGAAGATGGATGTTTCTGTTGTAATACAAGAACATGATGTGCAAGATTCATTCATAAGAGGTCTTCATGTGGAGTCGACACTGGCAGGAGTGTCTTCAGATACCACAGAATGTGTTGATGAATCTAGATCAGCACCAGAAGAAATAATTAGGCCTGTGTCAGGGGATGATGGGATGGAAAGCAATCGGAAGAATGAAGCATCAGGAGGGAATGAAGAACCCCTGCAGAGCTCCATTGTAACAGGCTTGCTGCAATCATCGGATGATCAGCAACTCAAGAATGCACTGAGCAATTTAGAGGCAGAAGAAAACCAAACAGACGATGCTTCTCCTTGCCAATCATCTAAAAACTCGATAGCTGTGGAAAATGCAGTTCTGGGCGACTCTCTATCAACCGAAAATAGTTCAGAAATTGAAGCTGATGGAGTGAAAGCCAACGCTAGCATGGAGTCTCAAGACGCTGAAGGTAATGAAGAAGAGGAAGCCCATGAAGGCCTTCAAGAATCTATAGAACAGTTGGCACTCGGTGAAAAACATGCTAAGGAGCCTGGATCTTTTCTTGGTTCCACCTCAGGAAATACAGTGGAAGATGTCAAGGCTGATGAAATATTTGAGGGTTGGACTAATAACAGTCCTTCACACTGCCAACCAATTTCAGAAACTTCATCAGATGGTGAACTTCTGGGGGAGCCAAAGTCTGTGCAAATTCAACCAAGTGATTCTACTCTACAAACAGATGGGTTAGTGATTTCTAGTACTGGCAACACCTTTGAACAGGATGAACTGAAACCAGGGTTTTTCCTTCAACAGTCACCTGAAGAACTATCAGAGGATGAATTTTACGAAGAGTATGATTTTGAGTTAAGTGAATTAGATGAATCTGGTACAGAAGATGAAGGACCAACGATCAATAAAAACAGCTATGATCATTTAAAGGCTGATGGACAACGACCAAAAAGAATCTCAGCGCTTGAACAGGATGATGATAGTGCCACACCTTACAAATTGAAATTTAAGAGAGGTAAAATTGTTGAACTCCAACCAGACAGTAATGGCCCAAGAAAACTCAAATTTAGAAGAAGAAGTGCAAGTGAATTTTCAAGCAGTGAAGGCCTGTCAGCTAGAAGAATATATAAGATGAATAGCACAATAGATGCTGGACCTTCTAACCTAGATGTGGAATCTCCTGGTGTGAAACTGCGACACCAAGATACACAAGAGAAGAAAGATGCACAGGGGCTGTTTAATAATGTTATAGAAGAAACTGCAAGTAAACTTGTCGAGTCCCGGAAAAGCAAGGTAAAGGCTTTAGTTGGTGCTTTTGAA ACAGTGATCTTGCTCCAGGACGGCAAACCCGCGTCTACACCACATGCTGGCAATTCACCACATTTATTTCATGATGACGAGGGAAATGCATCTGAGCAAGCTGCATAGATCATGTGTGCCTTTTTAACATTGCCAACTTGGCGGTCATGTTTTCAGCTTTCTTCTTCTTCTTTTTTATTTTTTTTT CTGATCTGGATTAATG CAGAGGATG TTGTGTAG CTTGTACA TTAAATTTCTTTAACAAG TAATATTTT CTCAACAGGTTTAGA GTATAATAAGTAGT CAATGTA CTTGTAAATAGTGATGT CAGGTTTATTTCATTGTAAATCAAATGAGAAGTTATAAAACCAAGTGTG ] [+] EMBL BI804553 [ TTGTCGAGTCCCGGAAAA CCAGGTAAAGGCTTTAGTTGGTGCTTTTGAACACAGTGATCTTGCTCCAGGACGCCAAACCCGCGTCTACACCACATGCTGCCAATTCACCACATTTATTTCATGATGACGAGGGAAATGCATCTGA CAAGCTGCATAGATCATGTGT CCTTTTTAACATTGCC ACTTGGCGGTCATGTTTTCAGCTTTCTTCTTCTTCTTTTTTATTTTTTTTTCCTGATCTGGATTAATGCCAGAGGATGCTTGTGTAGCCTTGTACACTTAAATTTCTTTAACCCGCTAATATTTTCCTCAACAGGTTTAGACGTATAATAAGTAGTCCAATGTACCTTGTAAATAGTGATGTCCAGGTTTATTTC TTGTAAATC AATGAGAAGTTATAAAACC AGTGTGCTTTACTTGTAATTGGATTTCCAATGCTATCAAGAGAGGTGATGGCTTGGAGCTTGTTTACCACCATTTCTGTAGCCAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||