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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 363 cluster # 363       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_363#0 length = 1123 sequences # 2  

consensusID : consensus_363#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1123
fasta sequence
                              [TTTTTTTTTTTTTTTATCCAGATCTCAGCTTATTTATCCTATTGGAACAATATATCCCCACAAATACACGTAATGATTTATTACAATATTCCACATTAATCATCTAATATTGCCATACATTTTTTTTTCGGGGAAAAGGATCTATATTACTCAAACACAGGCCTGACAGAGACTCACACCGAGCTTTATTCGCTAACCATGAAATGAAATTACAACTATTATCCGGCCACAGGCCTGACAGAGATTCACACCGAGCTTTATTCGCTAAACATTGGCTAACCCGGTTTTGACTACAACAGACTTTGCTAAAGAGAATTTCCCTGTCACCGCCCATAAAATCCTTGACTGCATTGATAACATATGCCAAATCAGACCTATCCTTCTCCTTGGACTGAAGCAACTGCAGAGAAACCTGACAATCCGTTTCCATCATGATTGGTAAAAGAGACCACTGGACAGCAAAATATTGTCATACCTGATACAATGTTTTTGAGCAGTCCAGTGAAGTGGCTGCCTGGCTTCTAACTCAAGTTGATGTGGCCATAGCACATAGAGGAATGGCTTTTGCTAGAGTTACACCAAACTTTTCTGTCATATTAACTCCATCTCTTTCGACCTTGATTGGGAGTCTCCACTTGAAATTCCTTAGTAGTGATGCAAGAACCACATGGACCATCCTAACAGCTAATGGCAATCCAGGGCAGATCCGTCTTCCAGCTCCGAATGGAATGAGCTCAAAATCCGCACCTTTAAAGTCAGTTGCCCTTTCTAGAAATCTCTCCGGCATAAACTTCTCTGCCTCTGGCCATATGTCTTTATCTCGACCCATAGCCCAGACATTTATAAACACTTTTGCACCTTTAGGTATTGTATAGCCCAATATTTGAATTGTTGTTGTAGCTTGACGTGGTAATAAAAATGGAACAGGTGGATGCAATCGAAATGTTTCTTTGATGACAGCTTGCAAATAGGGCAGTCGACCAATATCAGATTCTTCAATTCTTCTTGTGGATCCAATAACTCGTTGCAGTTCATCGCATGCTTTAGCCATTGGTAATGGGTTTCTAAGCAATTCTGCCATCGCCCATTATACAGTGCTAGAGCTTGTGTCACTTCCAGCAGC]

[+] EMBL CA760304             [TTTTTTTTTTTTTTTATCCAGATCTCAGCTTATTTATCCTATTGGAACAATATATCCCCACAAATACACGTAATGATTTATTACAATATTCCACATTAATCATCTAATATTGCCATACATTTTTTTTTCGGGGAAAAGGATCTATATTACTCAAACACAGGCCTGACAGAGACTCACACCGAGCTTTATTCGCTAACCATGAAATGAAATTACAACTATTATCCGGCCACAGGCCTGACAGAGATTCACACCGAGCTTTATTCGCTAAACATTGGCTAACCCGGTTTTGACTACAACAGACTTTGCTAAAGAGAATTTCCCTGTCACCGCCCATAAAATCCTTGACTGCATTGATAACATATGCCAAATCAGACCTATCCTTCTCCTTGGACTGAAGCAACTGCAGAGAAACCTGACAATCCGTTTCCATCATGATTGGTAAAAGAGACCACTGGACAGCAAAATATTGTCATACCTGATACAATGTTTTTGAGCAGTCCAGTGAAGTGGCTGCCTGGCTTCTAACTCAAGTTGATGTGGCCATAGCACATAGAGGAATGGCTTTTGCTAGAGTTACACCAAACTTTTCTGTCATATTAACTCCATCTCTTTCGACCTTGATTGGGAGTCTCCACTTGAAATTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB000966             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGGAATGGCTTTTGCTAGAGTTACACCAAACTTATCTGTCATATTAACTCCATCTCTTTCGACCTTGACTGGGAGTCTCCACTTGAAATTAATTAGTAGTGATGCAAGAACCACATGGACCATCCTAACAGCTAATGGCAATCCAGGGCAGATCCGTCTTCCAGCTCCGAATGGAATGAGCTCAAAATCCGCACCTTTAAAGTCAGTTGCCCTTTCTAGAAATCTCTCCGGCATAAACTTCTCTGCCTCTGGCCATATGTCTTTATCTCGACCCATAGCCCAGACATTTATAAACACTTTTGCACCTTTAGGTATTGTATAGCCCAATATTTGAATTGTTGTTGTAGCTTGACGTGGTAATAAAAATGGAACAGGTGGATGCAATCGAAATGTTTCTTTGATGACAGCTTGCAAATAGGGCAGTCGACCAATATCAGATTCTTCAATTCTTCTTGTGGATCCAATAACTCGTTGCAGTTCATCGCATGCTTTAGCCATTGGTAATGGGTTTCTAAGCAATTCTGCCATCGCCCATTATACAGTGCTAGAGCTTGTGTCACTTCCAGCAGC]


>consensus_363#0 TTTTTTTTTTTTTTTATCCAGATCTCAGCTTATTTATCCTATTGGAACAATATATCCCCA CAAATACACGTAATGATTTATTACAATATTCCACATTAATCATCTAATATTGCCATACAT TTTTTTTTCGGGGAAAAGGATCTATATTACTCAAACACAGGCCTGACAGAGACTCACACC GAGCTTTATTCGCTAACCATGAAATGAAATTACAACTATTATCCGGCCACAGGCCTGACA GAGATTCACACCGAGCTTTATTCGCTAAACATTGGCTAACCCGGTTTTGACTACAACAGA CTTTGCTAAAGAGAATTTCCCTGTCACCGCCCATAAAATCCTTGACTGCATTGATAACAT ATGCCAAATCAGACCTATCCTTCTCCTTGGACTGAAGCAACTGCAGAGAAACCTGACAAT CCGTTTCCATCATGATTGGTAAAAGAGACCACTGGACAGCAAAATATTGTCATACCTGAT ACAATGTTTTTGAGCAGTCCAGTGAAGTGGCTGCCTGGCTTCTAACTCAAGTTGATGTGG CCATAGCACATAGAGGAATGGCTTTTGCTAGAGTTACACCAAACTTTTCTGTCATATTAA CTCCATCTCTTTCGACCTTGATTGGGAGTCTCCACTTGAAATTCCTTAGTAGTGATGCAA GAACCACATGGACCATCCTAACAGCTAATGGCAATCCAGGGCAGATCCGTCTTCCAGCTC CGAATGGAATGAGCTCAAAATCCGCACCTTTAAAGTCAGTTGCCCTTTCTAGAAATCTCT CCGGCATAAACTTCTCTGCCTCTGGCCATATGTCTTTATCTCGACCCATAGCCCAGACAT TTATAAACACTTTTGCACCTTTAGGTATTGTATAGCCCAATATTTGAATTGTTGTTGTAG CTTGACGTGGTAATAAAAATGGAACAGGTGGATGCAATCGAAATGTTTCTTTGATGACAG CTTGCAAATAGGGCAGTCGACCAATATCAGATTCTTCAATTCTTCTTGTGGATCCAATAA CTCGTTGCAGTTCATCGCATGCTTTAGCCATTGGTAATGGGTTTCTAAGCAATTCTGCCA TCGCCCATTATACAGTGCTAGAGCTTGTGTCACTTCCAGCAGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)